Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.23□□□□□ -2.21
CCL20P78556 RN7SKP258-201ENST00000517151 304 ntBASIC1.23□□□□□ -2.21
CCL20P78556 HSPE1P18-201ENST00000517602 280 ntBASIC1.23□□□□□ -2.21
CCL20P78556 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.23□□□□□ -2.21
CCL20P78556 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.23□□□□□ -2.21
CCL20P78556 NDUFA5P6-201ENST00000542110 379 ntBASIC1.23□□□□□ -2.21
CCL20P78556 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.23□□□□□ -2.21
CCL20P78556 AC087897.1-201ENST00000550134 156 ntBASIC1.23□□□□□ -2.21
CCL20P78556 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.23□□□□□ -2.21
CCL20P78556 MIR4285-201ENST00000581001 85 ntBASIC1.23□□□□□ -2.21
CCL20P78556 MIR3162-201ENST00000581818 82 ntBASIC1.23□□□□□ -2.21
CCL20P78556 MIR4713-201ENST00000582691 75 ntBASIC1.23□□□□□ -2.21
CCL20P78556 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.23□□□□□ -2.21
CCL20P78556 NDUFA8P1-201ENST00000605525 367 ntBASIC1.23□□□□□ -2.21
CCL20P78556 AC034229.4-201ENST00000607861 441 ntBASIC1.23□□□□□ -2.21
CCL20P78556 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.23□□□□□ -2.21
CCL20P78556 AC138627.2-201ENST00000624202 601 ntBASIC1.23□□□□□ -2.21
CCL20P78556 AP001002.2-201ENST00000625137 386 ntBASIC1.23□□□□□ -2.21
CCL20P78556 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.23□□□□□ -2.21
CCL20P78556 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.23□□□□□ -2.21
CCL20P78556 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.23□□□□□ -2.21
CCL20P78556 AC006927.2-201ENST00000639256 389 ntBASIC1.23□□□□□ -2.21
CCL20P78556 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
CCL20P78556 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.22□□□□□ -2.21
CCL20P78556 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
CCL20P78556 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.22□□□□□ -2.21
CCL20P78556 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.22□□□□□ -2.21
CCL20P78556 RNU6-1032P-201ENST00000384100 107 ntBASIC1.22□□□□□ -2.21
CCL20P78556 RNA5SP212-201ENST00000391223 107 ntBASIC1.22□□□□□ -2.21
CCL20P78556 AC068050.1-201ENST00000394891 380 ntBASIC1.22□□□□□ -2.21
CCL20P78556 AC127391.1-201ENST00000411737 98 ntBASIC1.22□□□□□ -2.21
CCL20P78556 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.22□□□□□ -2.21
CCL20P78556 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.22□□□□□ -2.21
CCL20P78556 AC104651.1-201ENST00000427559 735 ntBASIC1.22□□□□□ -2.21
CCL20P78556 VN1R108P-201ENST00000431580 830 ntBASIC1.22□□□□□ -2.21
CCL20P78556 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC1.22□□□□□ -2.21
CCL20P78556 RNA5SP57-201ENST00000459463 123 ntBASIC1.22□□□□□ -2.21
CCL20P78556 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.22□□□□□ -2.21
CCL20P78556 AC093801.2-201ENST00000503966 1050 ntBASIC1.22□□□□□ -2.21
CCL20P78556 AC116655.1-201ENST00000508324 901 ntBASIC1.22□□□□□ -2.21
CCL20P78556 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.22□□□□□ -2.21
CCL20P78556 RNA5SP182-201ENST00000516064 82 ntBASIC1.22□□□□□ -2.21
CCL20P78556 RNA5SP61-201ENST00000516453 100 ntBASIC1.22□□□□□ -2.21
CCL20P78556 AP004607.1-201ENST00000524456 203 ntBASIC1.22□□□□□ -2.21
CCL20P78556 DEFB130C-202ENST00000530001 230 ntBASIC1.22□□□□□ -2.21
CCL20P78556 OR5B19P-201ENST00000531766 928 ntBASIC1.22□□□□□ -2.21
CCL20P78556 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.22□□□□□ -2.21
CCL20P78556 AC110588.1-201ENST00000559699 137 ntBASIC1.22□□□□□ -2.21
CCL20P78556 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC1.22□□□□□ -2.21
CCL20P78556 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC1.22□□□□□ -2.21
CCL20P78556 AC005776.1-201ENST00000603164 290 ntBASIC1.22□□□□□ -2.21
CCL20P78556 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.22□□□□□ -2.21
CCL20P78556 SNRPGP17-201ENST00000603780 214 ntBASIC1.22□□□□□ -2.21
CCL20P78556 AC087045.1-201ENST00000605856 382 ntBASIC1.22□□□□□ -2.21
CCL20P78556 AC126118.1-201ENST00000607744 628 ntBASIC1.22□□□□□ -2.21
CCL20P78556 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.22□□□□□ -2.21
CCL20P78556 CDC27P3-201ENST00000635418 1910 ntBASIC1.22□□□□□ -2.21
CCL20P78556 AP000776.1-201ENST00000530032 1663 ntBASIC1.22□□□□□ -2.21
CCL20P78556 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
CCL20P78556 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
CCL20P78556 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CCL20P78556 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CCL20P78556 MIR126-201ENST00000362291 85 ntBASIC1.21□□□□□ -2.22
CCL20P78556 RNU5E-1-201ENST00000362477 120 ntBASIC1.21□□□□□ -2.22
CCL20P78556 RNU1-62P-201ENST00000362599 164 ntBASIC1.21□□□□□ -2.22
CCL20P78556 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC1.21□□□□□ -2.22
CCL20P78556 OR51A5P-201ENST00000415429 942 ntBASIC1.21□□□□□ -2.22
CCL20P78556 AC007098.1-201ENST00000420122 367 ntBASIC1.21□□□□□ -2.22
CCL20P78556 AL445669.1-201ENST00000426743 755 ntBASIC1.21□□□□□ -2.22
CCL20P78556 USP9YP10-201ENST00000454868 628 ntBASIC1.21□□□□□ -2.22
CCL20P78556 AC006512.1-201ENST00000468816 291 ntBASIC1.21□□□□□ -2.22
CCL20P78556 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.21□□□□□ -2.22
CCL20P78556 AC092436.1-201ENST00000506450 503 ntBASIC1.21□□□□□ -2.22
CCL20P78556 AC117522.2-201ENST00000510049 657 ntBASIC1.21□□□□□ -2.22
CCL20P78556 AC008834.1-201ENST00000511612 175 ntBASIC1.21□□□□□ -2.22
CCL20P78556 RNU6-678P-201ENST00000516832 109 ntBASIC1.21□□□□□ -2.22
CCL20P78556 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.21□□□□□ -2.22
CCL20P78556 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.21□□□□□ -2.22
CCL20P78556 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.21□□□□□ -2.22
CCL20P78556 AC021451.1-201ENST00000523498 1129 ntBASIC1.21□□□□□ -2.22
CCL20P78556 AC022254.1-201ENST00000567857 235 ntBASIC1.21□□□□□ -2.22
CCL20P78556 AL354943.1-201ENST00000572103 781 ntBASIC1.21□□□□□ -2.22
CCL20P78556 AC060771.1-201ENST00000582031 164 ntBASIC1.21□□□□□ -2.22
CCL20P78556 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.21□□□□□ -2.22
CCL20P78556 ELOCP5-201ENST00000604924 333 ntBASIC1.21□□□□□ -2.22
CCL20P78556 BX323046.1-201ENST00000610145 535 ntBASIC1.21□□□□□ -2.22
CCL20P78556 AL136981.2-201ENST00000617319 734 ntBASIC1.21□□□□□ -2.22
CCL20P78556 MIR6134-201ENST00000617606 109 ntBASIC1.21□□□□□ -2.22
CCL20P78556 AC092192.1-201ENST00000633154 1018 ntBASIC1.21□□□□□ -2.22
CCL20P78556 AC097655.1-201ENST00000635075 318 ntBASIC1.21□□□□□ -2.22
CCL20P78556 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.21□□□□□ -2.22
CCL20P78556 ZNF876P-202ENST00000398732 1485 ntBASIC1.2□□□□□ -2.22
CCL20P78556 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
CCL20P78556 Z98749.2-208ENST00000381646 500 ntBASIC1.2□□□□□ -2.22
CCL20P78556 MIR1304-201ENST00000408243 91 ntBASIC1.2□□□□□ -2.22
CCL20P78556 RN7SKP51-201ENST00000410781 304 ntBASIC1.2□□□□□ -2.22
CCL20P78556 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.2□□□□□ -2.22
CCL20P78556 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC1.2□□□□□ -2.22
CCL20P78556 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.2□□□□□ -2.22
CCL20P78556 DPH3P2-201ENST00000422618 250 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms