Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 Z80107.1-201ENST00000436830 412 ntBASIC0.96□□□□□ -2.26
ABCA4P78363 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC0.96□□□□□ -2.26
ABCA4P78363 RPL23AP3-201ENST00000453844 468 ntBASIC0.96□□□□□ -2.26
ABCA4P78363 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
ABCA4P78363 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC0.96□□□□□ -2.26
ABCA4P78363 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC0.96□□□□□ -2.26
ABCA4P78363 AL078605.1-201ENST00000603529 500 ntBASIC0.96□□□□□ -2.26
ABCA4P78363 AL592148.2-201ENST00000612210 372 ntBASIC0.96□□□□□ -2.26
ABCA4P78363 AL589743.7-201ENST00000612637 233 ntBASIC0.96□□□□□ -2.26
ABCA4P78363 Y_RNA.294-201ENST00000364916 102 ntBASIC0.96□□□□□ -2.26
ABCA4P78363 Y_RNA.471-201ENST00000384312 102 ntBASIC0.96□□□□□ -2.26
ABCA4P78363 RNU1-148P-201ENST00000384472 162 ntBASIC0.96□□□□□ -2.26
ABCA4P78363 TRIM60P5Y-201ENST00000413946 574 ntBASIC0.96□□□□□ -2.26
ABCA4P78363 ZNF863P-201ENST00000426746 417 ntBASIC0.96□□□□□ -2.26
ABCA4P78363 MTCO1P57-201ENST00000432182 261 ntBASIC0.96□□□□□ -2.26
ABCA4P78363 AC005410.1-202ENST00000460347 485 ntBASIC0.96□□□□□ -2.26
ABCA4P78363 AC107953.1-201ENST00000522216 297 ntBASIC0.96□□□□□ -2.26
ABCA4P78363 AC092451.2-201ENST00000538746 658 ntBASIC0.96□□□□□ -2.26
ABCA4P78363 MIR3126-201ENST00000577443 74 ntBASIC0.96□□□□□ -2.26
ABCA4P78363 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC0.96□□□□□ -2.26
ABCA4P78363 MIR6130-201ENST00000619419 109 ntBASIC0.96□□□□□ -2.26
ABCA4P78363 AC008133.2-201ENST00000624540 351 ntBASIC0.96□□□□□ -2.26
ABCA4P78363 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
ABCA4P78363 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC0.96□□□□□ -2.26
ABCA4P78363 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
ABCA4P78363 MIR934-201ENST00000401241 83 ntBASIC0.95□□□□□ -2.26
ABCA4P78363 AL161449.1-201ENST00000414531 1199 ntBASIC0.95□□□□□ -2.26
ABCA4P78363 AC016691.1-201ENST00000441321 413 ntBASIC0.95□□□□□ -2.26
ABCA4P78363 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC0.95□□□□□ -2.26
ABCA4P78363 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC0.95□□□□□ -2.26
ABCA4P78363 AC108078.1-201ENST00000508073 725 ntBASIC0.95□□□□□ -2.26
ABCA4P78363 FAM206BP-201ENST00000510179 541 ntBASIC0.95□□□□□ -2.26
ABCA4P78363 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC0.95□□□□□ -2.26
ABCA4P78363 RNU6-405P-201ENST00000516637 110 ntBASIC0.95□□□□□ -2.26
ABCA4P78363 RNU6-467P-201ENST00000517027 110 ntBASIC0.95□□□□□ -2.26
ABCA4P78363 BPTFP1-201ENST00000579209 492 ntBASIC0.95□□□□□ -2.26
ABCA4P78363 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC0.95□□□□□ -2.26
ABCA4P78363 AC008121.1-201ENST00000603244 268 ntBASIC0.95□□□□□ -2.26
ABCA4P78363 AL161729.4-201ENST00000604650 476 ntBASIC0.95□□□□□ -2.26
ABCA4P78363 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0.95□□□□□ -2.26
ABCA4P78363 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC0.95□□□□□ -2.26
ABCA4P78363 RNU4-42P-201ENST00000364738 142 ntBASIC0.95□□□□□ -2.26
ABCA4P78363 AL121978.1-201ENST00000402778 359 ntBASIC0.95□□□□□ -2.26
ABCA4P78363 RNU6-77P-201ENST00000410554 91 ntBASIC0.95□□□□□ -2.26
ABCA4P78363 AL158823.1-201ENST00000418441 478 ntBASIC0.95□□□□□ -2.26
ABCA4P78363 AL358176.2-201ENST00000425769 204 ntBASIC0.95□□□□□ -2.26
ABCA4P78363 MTND6P13-201ENST00000443510 523 ntBASIC0.95□□□□□ -2.26
ABCA4P78363 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC0.95□□□□□ -2.26
ABCA4P78363 RNU1-98P-201ENST00000458992 160 ntBASIC0.95□□□□□ -2.26
ABCA4P78363 OR9N1P-202ENST00000494289 481 ntBASIC0.95□□□□□ -2.26
ABCA4P78363 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC0.95□□□□□ -2.26
ABCA4P78363 AC093852.1-201ENST00000503587 266 ntBASIC0.95□□□□□ -2.26
ABCA4P78363 AC008834.1-201ENST00000511612 175 ntBASIC0.95□□□□□ -2.26
ABCA4P78363 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.95□□□□□ -2.26
ABCA4P78363 RNA5SP112-201ENST00000515937 99 ntBASIC0.95□□□□□ -2.26
ABCA4P78363 SCARNA15.2-201ENST00000516409 127 ntBASIC0.95□□□□□ -2.26
ABCA4P78363 HSPA8P13-201ENST00000523715 472 ntBASIC0.95□□□□□ -2.26
ABCA4P78363 U4atac.1-201ENST00000618345 95 ntBASIC0.95□□□□□ -2.26
ABCA4P78363 AC091304.6-201ENST00000619761 202 ntBASIC0.95□□□□□ -2.26
ABCA4P78363 SNORA23-201ENST00000365128 182 ntBASIC0.94□□□□□ -2.26
ABCA4P78363 RNU11-5P-201ENST00000391216 129 ntBASIC0.94□□□□□ -2.26
ABCA4P78363 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.94□□□□□ -2.26
ABCA4P78363 TRBV25OR9-2-201ENST00000438417 374 ntBASIC0.94□□□□□ -2.26
ABCA4P78363 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC0.94□□□□□ -2.26
ABCA4P78363 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC0.94□□□□□ -2.26
ABCA4P78363 TPRKBP1-201ENST00000456243 481 ntBASIC0.94□□□□□ -2.26
ABCA4P78363 SSR3-208ENST00000496050 579 ntTSL 4 BASIC0.94□□□□□ -2.26
ABCA4P78363 MTCYBP35-201ENST00000503630 1137 ntBASIC0.94□□□□□ -2.26
ABCA4P78363 AC113420.1-201ENST00000507903 571 ntBASIC0.94□□□□□ -2.26
ABCA4P78363 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC0.94□□□□□ -2.26
ABCA4P78363 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC0.94□□□□□ -2.26
ABCA4P78363 SUB1P4-201ENST00000566062 339 ntBASIC0.94□□□□□ -2.26
ABCA4P78363 AL671309.1-201ENST00000603750 544 ntBASIC0.94□□□□□ -2.26
ABCA4P78363 AC103810.9-201ENST00000606688 112 ntBASIC0.94□□□□□ -2.26
ABCA4P78363 AC007349.4-201ENST00000608114 532 ntBASIC0.94□□□□□ -2.26
ABCA4P78363 AC108706.1-201ENST00000611053 297 ntBASIC0.94□□□□□ -2.26
ABCA4P78363 MIR6857-201ENST00000613267 93 ntBASIC0.94□□□□□ -2.26
ABCA4P78363 AP002791.1-201ENST00000623291 381 ntBASIC0.94□□□□□ -2.26
ABCA4P78363 AC090772.4-201ENST00000623599 362 ntBASIC0.94□□□□□ -2.26
ABCA4P78363 ZNF736P3Y-201ENST00000428264 1465 ntBASIC0.94□□□□□ -2.26
ABCA4P78363 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC0.94□□□□□ -2.26
ABCA4P78363 Y_RNA.115-201ENST00000363272 98 ntBASIC0.94□□□□□ -2.26
ABCA4P78363 SNORA51.6-201ENST00000384151 125 ntBASIC0.94□□□□□ -2.26
ABCA4P78363 RPL7P27-201ENST00000403775 720 ntBASIC0.94□□□□□ -2.26
ABCA4P78363 RNU2-49P-201ENST00000410666 184 ntBASIC0.94□□□□□ -2.26
ABCA4P78363 RN7SKP51-201ENST00000410781 304 ntBASIC0.94□□□□□ -2.26
ABCA4P78363 MTCO3P46-201ENST00000425787 232 ntBASIC0.94□□□□□ -2.26
ABCA4P78363 AL050341.1-201ENST00000447743 313 ntBASIC0.94□□□□□ -2.26
ABCA4P78363 RPL23AP35-201ENST00000451906 501 ntBASIC0.94□□□□□ -2.26
ABCA4P78363 HMGB3P17-201ENST00000504195 649 ntBASIC0.94□□□□□ -2.26
ABCA4P78363 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
ABCA4P78363 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
ABCA4P78363 ARL2BPP5-201ENST00000523141 481 ntBASIC0.94□□□□□ -2.26
ABCA4P78363 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC0.94□□□□□ -2.26
ABCA4P78363 AL138963.2-201ENST00000605137 226 ntBASIC0.94□□□□□ -2.26
ABCA4P78363 AC068276.1-201ENST00000605793 379 ntBASIC0.94□□□□□ -2.26
ABCA4P78363 BX322635.1-201ENST00000605804 496 ntBASIC0.94□□□□□ -2.26
ABCA4P78363 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC0.94□□□□□ -2.26
ABCA4P78363 AC096586.1-201ENST00000610267 561 ntBASIC0.94□□□□□ -2.26
ABCA4P78363 AC010889.1-201ENST00000566193 2666 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms