Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.58□□□□□ -2.16
ACTBP60709 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.58□□□□□ -2.16
ACTBP60709 AL355598.1-201ENST00000604169 202 ntBASIC1.58□□□□□ -2.16
ACTBP60709 AL161798.1-201ENST00000604630 131 ntBASIC1.58□□□□□ -2.16
ACTBP60709 AC011939.3-201ENST00000613686 466 ntBASIC1.58□□□□□ -2.16
ACTBP60709 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
ACTBP60709 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.57□□□□□ -2.16
ACTBP60709 MIR561-201ENST00000385216 97 ntBASIC1.57□□□□□ -2.16
ACTBP60709 Y_RNA.578-201ENST00000390903 88 ntBASIC1.57□□□□□ -2.16
ACTBP60709 RNU2-68P-201ENST00000410878 191 ntBASIC1.57□□□□□ -2.16
ACTBP60709 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.57□□□□□ -2.16
ACTBP60709 AL953862.1-201ENST00000423016 168 ntBASIC1.57□□□□□ -2.16
ACTBP60709 AC244035.1-201ENST00000430042 390 ntBASIC1.57□□□□□ -2.16
ACTBP60709 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.57□□□□□ -2.16
ACTBP60709 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.57□□□□□ -2.16
ACTBP60709 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.57□□□□□ -2.16
ACTBP60709 MTND2P29-201ENST00000438595 412 ntBASIC1.57□□□□□ -2.16
ACTBP60709 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.57□□□□□ -2.16
ACTBP60709 RPL7P12-201ENST00000446719 750 ntBASIC1.57□□□□□ -2.16
ACTBP60709 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.57□□□□□ -2.16
ACTBP60709 RPL21P99-201ENST00000480369 423 ntBASIC1.57□□□□□ -2.16
ACTBP60709 AC018437.1-201ENST00000492214 406 ntBASIC1.57□□□□□ -2.16
ACTBP60709 RPL38P4-201ENST00000502376 214 ntBASIC1.57□□□□□ -2.16
ACTBP60709 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.57□□□□□ -2.16
ACTBP60709 AC024589.1-201ENST00000512207 263 ntBASIC1.57□□□□□ -2.16
ACTBP60709 AC021451.1-201ENST00000523498 1129 ntBASIC1.57□□□□□ -2.16
ACTBP60709 AC022880.1-201ENST00000534017 973 ntBASIC1.57□□□□□ -2.16
ACTBP60709 GNAI2P1-201ENST00000541815 315 ntBASIC1.57□□□□□ -2.16
ACTBP60709 MIR4419B-201ENST00000577260 68 ntBASIC1.57□□□□□ -2.16
ACTBP60709 MIR3198-2-201ENST00000577868 80 ntBASIC1.57□□□□□ -2.16
ACTBP60709 MIR4285-201ENST00000581001 85 ntBASIC1.57□□□□□ -2.16
ACTBP60709 MIR4713-201ENST00000582691 75 ntBASIC1.57□□□□□ -2.16
ACTBP60709 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.57□□□□□ -2.16
ACTBP60709 AC010928.2-201ENST00000588017 287 ntBASIC1.57□□□□□ -2.16
ACTBP60709 AC098826.3-201ENST00000603823 466 ntBASIC1.57□□□□□ -2.16
ACTBP60709 AC009974.1-201ENST00000608881 455 ntBASIC1.57□□□□□ -2.16
ACTBP60709 AC093673.2-201ENST00000609674 331 ntBASIC1.57□□□□□ -2.16
ACTBP60709 AC124016.2-201ENST00000610058 665 ntBASIC1.57□□□□□ -2.16
ACTBP60709 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.57□□□□□ -2.16
ACTBP60709 AC018926.1-201ENST00000616335 435 ntBASIC1.57□□□□□ -2.16
ACTBP60709 AL512427.1-201ENST00000618593 349 ntBASIC1.57□□□□□ -2.16
ACTBP60709 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC1.57□□□□□ -2.16
ACTBP60709 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
ACTBP60709 AP000943.4-201ENST00000622912 357 ntBASIC1.57□□□□□ -2.16
ACTBP60709 ZNF355P-201ENST00000427301 3216 ntBASIC1.57□□□□□ -2.16
ACTBP60709 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.56□□□□□ -2.16
ACTBP60709 RNU6-621P-201ENST00000364752 109 ntBASIC1.56□□□□□ -2.16
ACTBP60709 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
ACTBP60709 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.56□□□□□ -2.16
ACTBP60709 RNU2-2P-201ENST00000410396 191 ntBASIC1.56□□□□□ -2.16
ACTBP60709 RNU2-20P-201ENST00000410425 191 ntBASIC1.56□□□□□ -2.16
ACTBP60709 AL160275.3-201ENST00000423876 471 ntBASIC1.56□□□□□ -2.16
ACTBP60709 PTGES3P4-201ENST00000426243 356 ntBASIC1.56□□□□□ -2.16
ACTBP60709 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.56□□□□□ -2.16
ACTBP60709 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.56□□□□□ -2.16
ACTBP60709 IFNA20P-201ENST00000436840 528 ntBASIC1.56□□□□□ -2.16
ACTBP60709 RSU1P2-202ENST00000437884 485 ntBASIC1.56□□□□□ -2.16
ACTBP60709 AL161788.1-201ENST00000441805 169 ntBASIC1.56□□□□□ -2.16
ACTBP60709 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.56□□□□□ -2.16
ACTBP60709 PPP1R2P5-201ENST00000457256 603 ntBASIC1.56□□□□□ -2.16
ACTBP60709 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.56□□□□□ -2.16
ACTBP60709 AC107393.1-201ENST00000512403 346 ntBASIC1.56□□□□□ -2.16
ACTBP60709 RNU6-150P-201ENST00000516237 95 ntBASIC1.56□□□□□ -2.16
ACTBP60709 SNORA44.1-201ENST00000517031 108 ntBASIC1.56□□□□□ -2.16
ACTBP60709 RN7SKP258-201ENST00000517151 304 ntBASIC1.56□□□□□ -2.16
ACTBP60709 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.56□□□□□ -2.16
ACTBP60709 AP000873.5-201ENST00000533906 236 ntBASIC1.56□□□□□ -2.16
ACTBP60709 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
ACTBP60709 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.56□□□□□ -2.16
ACTBP60709 U2.15-201ENST00000611544 191 ntBASIC1.56□□□□□ -2.16
ACTBP60709 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
ACTBP60709 U2.16-201ENST00000613119 191 ntBASIC1.56□□□□□ -2.16
ACTBP60709 U2.12-201ENST00000613778 191 ntBASIC1.56□□□□□ -2.16
ACTBP60709 U2.20-201ENST00000613956 192 ntBASIC1.56□□□□□ -2.16
ACTBP60709 U2.9-201ENST00000615427 191 ntBASIC1.56□□□□□ -2.16
ACTBP60709 U2.11-201ENST00000616345 191 ntBASIC1.56□□□□□ -2.16
ACTBP60709 U2.2-201ENST00000616535 191 ntBASIC1.56□□□□□ -2.16
ACTBP60709 U2.3-201ENST00000617785 191 ntBASIC1.56□□□□□ -2.16
ACTBP60709 U2.19-201ENST00000618602 191 ntBASIC1.56□□□□□ -2.16
ACTBP60709 RNU2-1-201ENST00000618664 191 ntBASIC1.56□□□□□ -2.16
ACTBP60709 AL158163.2-201ENST00000619110 700 ntBASIC1.56□□□□□ -2.16
ACTBP60709 U2.6-201ENST00000619225 191 ntBASIC1.56□□□□□ -2.16
ACTBP60709 U2.5-201ENST00000619465 191 ntBASIC1.56□□□□□ -2.16
ACTBP60709 U2.10-201ENST00000620268 191 ntBASIC1.56□□□□□ -2.16
ACTBP60709 AC012150.2-201ENST00000621300 544 ntBASIC1.56□□□□□ -2.16
ACTBP60709 YWHAEP7-203ENST00000622054 312 ntBASIC1.56□□□□□ -2.16
ACTBP60709 AC104985.3-201ENST00000623479 597 ntBASIC1.56□□□□□ -2.16
ACTBP60709 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.56□□□□□ -2.16
ACTBP60709 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.56□□□□□ -2.16
ACTBP60709 AC092881.1-201ENST00000638218 2733 ntBASIC1.56□□□□□ -2.16
ACTBP60709 RNA5SP88-201ENST00000365560 109 ntBASIC1.55□□□□□ -2.16
ACTBP60709 RNU6-748P-201ENST00000384648 107 ntBASIC1.55□□□□□ -2.16
ACTBP60709 MIR518A2-201ENST00000384966 87 ntBASIC1.55□□□□□ -2.16
ACTBP60709 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.55□□□□□ -2.16
ACTBP60709 MTCO2P25-201ENST00000447065 681 ntBASIC1.55□□□□□ -2.16
ACTBP60709 FDX1P2-201ENST00000450769 375 ntBASIC1.55□□□□□ -2.16
ACTBP60709 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.55□□□□□ -2.16
ACTBP60709 AP001324.2-201ENST00000461163 319 ntBASIC1.55□□□□□ -2.16
ACTBP60709 AC010631.1-201ENST00000474150 156 ntBASIC1.55□□□□□ -2.16
ACTBP60709 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms