Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 RPL21P93-201ENST00000480465 489 ntBASIC3.58□□□□□ -1.84
COPB1P53618 AC078817.1-201ENST00000492623 435 ntBASIC3.58□□□□□ -1.84
COPB1P53618 APOOP4-201ENST00000513530 597 ntBASIC3.58□□□□□ -1.84
COPB1P53618 RNU6-123P-201ENST00000516163 102 ntBASIC3.58□□□□□ -1.84
COPB1P53618 RNU2-58P-201ENST00000516403 183 ntBASIC3.58□□□□□ -1.84
COPB1P53618 Y_RNA.691-201ENST00000516611 103 ntBASIC3.58□□□□□ -1.84
COPB1P53618 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.58□□□□□ -1.84
COPB1P53618 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.58□□□□□ -1.84
COPB1P53618 AC011611.1-201ENST00000552179 197 ntBASIC3.58□□□□□ -1.84
COPB1P53618 RPL23AP84-201ENST00000571193 464 ntBASIC3.58□□□□□ -1.84
COPB1P53618 FAM60BP-201ENST00000578364 658 ntBASIC3.58□□□□□ -1.84
COPB1P53618 BNIP3P25-201ENST00000596023 559 ntBASIC3.58□□□□□ -1.84
COPB1P53618 AC104763.2-201ENST00000604179 382 ntBASIC3.58□□□□□ -1.84
COPB1P53618 AC092807.2-201ENST00000609367 243 ntBASIC3.58□□□□□ -1.84
COPB1P53618 uc_338.5-201ENST00000611839 155 ntBASIC3.58□□□□□ -1.84
COPB1P53618 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.58□□□□□ -1.84
COPB1P53618 AC091903.1-201ENST00000624322 454 ntBASIC3.58□□□□□ -1.84
COPB1P53618 TPTEP1-208ENST00000636884 213 ntBASIC3.58□□□□□ -1.84
COPB1P53618 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.58□□□□□ -1.84
COPB1P53618 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
COPB1P53618 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
COPB1P53618 AC121333.1-201ENST00000567488 2709 ntBASIC3.57□□□□□ -1.84
COPB1P53618 AF117829.1-206ENST00000621883 3802 ntBASIC3.57□□□□□ -1.84
COPB1P53618 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
COPB1P53618 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.57□□□□□ -1.84
COPB1P53618 RNU4-79P-201ENST00000362764 141 ntBASIC3.57□□□□□ -1.84
COPB1P53618 Y_RNA.184-201ENST00000363884 108 ntBASIC3.57□□□□□ -1.84
COPB1P53618 Y_RNA.373-201ENST00000365600 103 ntBASIC3.57□□□□□ -1.84
COPB1P53618 RNU6-1127P-201ENST00000384580 107 ntBASIC3.57□□□□□ -1.84
COPB1P53618 AL139397.2-201ENST00000404529 772 ntBASIC3.57□□□□□ -1.84
COPB1P53618 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.57□□□□□ -1.84
COPB1P53618 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.57□□□□□ -1.84
COPB1P53618 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.57□□□□□ -1.84
COPB1P53618 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.57□□□□□ -1.84
COPB1P53618 AC091390.3-201ENST00000426478 338 ntBASIC3.57□□□□□ -1.84
COPB1P53618 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.57□□□□□ -1.84
COPB1P53618 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.57□□□□□ -1.84
COPB1P53618 PRPS1P1-201ENST00000445305 876 ntBASIC3.57□□□□□ -1.84
COPB1P53618 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.57□□□□□ -1.84
COPB1P53618 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.57□□□□□ -1.84
COPB1P53618 HSPE1P6-201ENST00000479457 291 ntBASIC3.57□□□□□ -1.84
COPB1P53618 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.57□□□□□ -1.84
COPB1P53618 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.57□□□□□ -1.84
COPB1P53618 Y_RNA.654-201ENST00000497848 106 ntBASIC3.57□□□□□ -1.84
COPB1P53618 AC023141.12-201ENST00000512399 199 ntBASIC3.57□□□□□ -1.84
COPB1P53618 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.57□□□□□ -1.84
COPB1P53618 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.57□□□□□ -1.84
COPB1P53618 AP000889.1-201ENST00000530968 660 ntBASIC3.57□□□□□ -1.84
COPB1P53618 RANP3-201ENST00000530970 276 ntBASIC3.57□□□□□ -1.84
COPB1P53618 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.57□□□□□ -1.84
COPB1P53618 AC093027.1-201ENST00000546698 429 ntBASIC3.57□□□□□ -1.84
COPB1P53618 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.57□□□□□ -1.84
COPB1P53618 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.57□□□□□ -1.84
COPB1P53618 OR11H5P-201ENST00000554039 926 ntBASIC3.57□□□□□ -1.84
COPB1P53618 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.57□□□□□ -1.84
COPB1P53618 MIR5195-201ENST00000583555 115 ntBASIC3.57□□□□□ -1.84
COPB1P53618 SNORD84-203ENST00000584275 78 ntBASIC3.57□□□□□ -1.84
COPB1P53618 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.57□□□□□ -1.84
COPB1P53618 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.57□□□□□ -1.84
COPB1P53618 DPPA3P3-201ENST00000603842 430 ntBASIC3.57□□□□□ -1.84
COPB1P53618 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.57□□□□□ -1.84
COPB1P53618 CTHRC1P1-201ENST00000605383 469 ntBASIC3.57□□□□□ -1.84
COPB1P53618 AC093913.1-201ENST00000614178 329 ntBASIC3.57□□□□□ -1.84
COPB1P53618 MTND5P42-201ENST00000637720 498 ntBASIC3.57□□□□□ -1.84
COPB1P53618 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
COPB1P53618 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
COPB1P53618 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.56□□□□□ -1.84
COPB1P53618 U3.6-201ENST00000363622 211 ntBASIC3.56□□□□□ -1.84
COPB1P53618 RNU6-82P-201ENST00000363970 107 ntBASIC3.56□□□□□ -1.84
COPB1P53618 Y_RNA.301-201ENST00000364990 103 ntBASIC3.56□□□□□ -1.84
COPB1P53618 Y_RNA.474-201ENST00000384341 102 ntBASIC3.56□□□□□ -1.84
COPB1P53618 MIR183-201ENST00000384958 110 ntBASIC3.56□□□□□ -1.84
COPB1P53618 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.56□□□□□ -1.84
COPB1P53618 RPL32P35-201ENST00000415214 394 ntBASIC3.56□□□□□ -1.84
COPB1P53618 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.56□□□□□ -1.84
COPB1P53618 AC092809.3-201ENST00000415453 231 ntBASIC3.56□□□□□ -1.84
COPB1P53618 HSPE1P1-201ENST00000421494 318 ntBASIC3.56□□□□□ -1.84
COPB1P53618 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.56□□□□□ -1.84
COPB1P53618 RPS15AP27-201ENST00000449183 343 ntBASIC3.56□□□□□ -1.84
COPB1P53618 SCARNA18-201ENST00000459004 134 ntBASIC3.56□□□□□ -1.84
COPB1P53618 RN7SL293P-201ENST00000481765 281 ntBASIC3.56□□□□□ -1.84
COPB1P53618 RPL21P13-201ENST00000488305 481 ntBASIC3.56□□□□□ -1.84
COPB1P53618 AC093663.1-201ENST00000497190 394 ntBASIC3.56□□□□□ -1.84
COPB1P53618 VN1R104P-201ENST00000505115 1009 ntBASIC3.56□□□□□ -1.84
COPB1P53618 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.56□□□□□ -1.84
COPB1P53618 Y_RNA.675-201ENST00000516389 149 ntBASIC3.56□□□□□ -1.84
COPB1P53618 Y_RNA.689-201ENST00000516589 107 ntBASIC3.56□□□□□ -1.84
COPB1P53618 AC245166.1-201ENST00000521012 253 ntBASIC3.56□□□□□ -1.84
COPB1P53618 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.56□□□□□ -1.84
COPB1P53618 AP004242.1-201ENST00000533701 349 ntBASIC3.56□□□□□ -1.84
COPB1P53618 AC026464.5-201ENST00000562497 722 ntBASIC3.56□□□□□ -1.84
COPB1P53618 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.56□□□□□ -1.84
COPB1P53618 AC012182.1-201ENST00000570133 895 ntBASIC3.56□□□□□ -1.84
COPB1P53618 AC010928.3-201ENST00000587712 541 ntBASIC3.56□□□□□ -1.84
COPB1P53618 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.56□□□□□ -1.84
COPB1P53618 BDH2P1-201ENST00000602288 736 ntBASIC3.56□□□□□ -1.84
COPB1P53618 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.56□□□□□ -1.84
COPB1P53618 AL360181.4-201ENST00000621752 134 ntBASIC3.56□□□□□ -1.84
COPB1P53618 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.56□□□□□ -1.84
COPB1P53618 U6.105-201ENST00000637379 88 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms