Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.46□□□□□ -2.18
COL4A2P08572 AC009712.1-201ENST00000564938 316 ntBASIC1.46□□□□□ -2.18
COL4A2P08572 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.46□□□□□ -2.18
COL4A2P08572 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.46□□□□□ -2.18
COL4A2P08572 AL357094.1-201ENST00000603845 844 ntBASIC1.46□□□□□ -2.18
COL4A2P08572 AL158050.2-201ENST00000605336 568 ntBASIC1.46□□□□□ -2.18
COL4A2P08572 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
COL4A2P08572 AC079395.3-201ENST00000615161 484 ntBASIC1.46□□□□□ -2.18
COL4A2P08572 AC079597.1-201ENST00000624306 508 ntBASIC1.46□□□□□ -2.18
COL4A2P08572 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
COL4A2P08572 AL354685.2-201ENST00000448218 1447 ntBASIC1.46□□□□□ -2.18
COL4A2P08572 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
COL4A2P08572 AL590084.2-201ENST00000401481 382 ntBASIC1.46□□□□□ -2.18
COL4A2P08572 AL356057.2-201ENST00000403318 432 ntBASIC1.46□□□□□ -2.18
COL4A2P08572 RNU2-25P-201ENST00000411041 191 ntBASIC1.46□□□□□ -2.18
COL4A2P08572 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.46□□□□□ -2.18
COL4A2P08572 OR10R1P-201ENST00000441524 1141 ntBASIC1.46□□□□□ -2.18
COL4A2P08572 DDX3P2-201ENST00000446138 111 ntBASIC1.46□□□□□ -2.18
COL4A2P08572 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC1.46□□□□□ -2.18
COL4A2P08572 AC087588.1-201ENST00000462203 316 ntBASIC1.46□□□□□ -2.18
COL4A2P08572 AC108729.1-201ENST00000487812 947 ntBASIC1.46□□□□□ -2.18
COL4A2P08572 AC022447.3-201ENST00000506865 495 ntBASIC1.46□□□□□ -2.18
COL4A2P08572 RNY4P37-201ENST00000516225 96 ntBASIC1.46□□□□□ -2.18
COL4A2P08572 RPPH1-2P-201ENST00000516688 293 ntBASIC1.46□□□□□ -2.18
COL4A2P08572 NRON-201ENST00000517270 370 ntBASIC1.46□□□□□ -2.18
COL4A2P08572 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.46□□□□□ -2.18
COL4A2P08572 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.46□□□□□ -2.18
COL4A2P08572 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.46□□□□□ -2.18
COL4A2P08572 AC021451.1-201ENST00000523498 1129 ntBASIC1.46□□□□□ -2.18
COL4A2P08572 MIR4509-3-201ENST00000578671 94 ntBASIC1.46□□□□□ -2.18
COL4A2P08572 MIR4509-2-201ENST00000583920 94 ntBASIC1.46□□□□□ -2.18
COL4A2P08572 AL355877.2-201ENST00000603670 358 ntBASIC1.46□□□□□ -2.18
COL4A2P08572 AC013553.2-201ENST00000604244 589 ntBASIC1.46□□□□□ -2.18
COL4A2P08572 AC006270.3-201ENST00000605967 1036 ntBASIC1.46□□□□□ -2.18
COL4A2P08572 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.46□□□□□ -2.18
COL4A2P08572 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
COL4A2P08572 MIR4509-1-201ENST00000618224 94 ntBASIC1.46□□□□□ -2.18
COL4A2P08572 AC004808.1-201ENST00000627671 721 ntBASIC1.46□□□□□ -2.18
COL4A2P08572 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.46□□□□□ -2.18
COL4A2P08572 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.45□□□□□ -2.18
COL4A2P08572 DDX43P2-201ENST00000604753 1354 ntBASIC1.45□□□□□ -2.18
COL4A2P08572 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
COL4A2P08572 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.45□□□□□ -2.18
COL4A2P08572 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
COL4A2P08572 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
COL4A2P08572 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.45□□□□□ -2.18
COL4A2P08572 SNORA68.1-201ENST00000364537 132 ntBASIC1.45□□□□□ -2.18
COL4A2P08572 RNU6-234P-201ENST00000365229 104 ntBASIC1.45□□□□□ -2.18
COL4A2P08572 CCNG1P1-201ENST00000406783 885 ntBASIC1.45□□□□□ -2.18
COL4A2P08572 MTCYBP38-201ENST00000417160 1123 ntBASIC1.45□□□□□ -2.18
COL4A2P08572 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.45□□□□□ -2.18
COL4A2P08572 AL513185.2-201ENST00000425543 193 ntBASIC1.45□□□□□ -2.18
COL4A2P08572 USP12PX-201ENST00000432383 1057 ntBASIC1.45□□□□□ -2.18
COL4A2P08572 AL445687.1-201ENST00000439946 251 ntBASIC1.45□□□□□ -2.18
COL4A2P08572 MTCYBP3-201ENST00000445588 1137 ntBASIC1.45□□□□□ -2.18
COL4A2P08572 AL358794.1-201ENST00000445689 381 ntBASIC1.45□□□□□ -2.18
COL4A2P08572 EEF1E1P1-201ENST00000446998 430 ntBASIC1.45□□□□□ -2.18
COL4A2P08572 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.45□□□□□ -2.18
COL4A2P08572 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.45□□□□□ -2.18
COL4A2P08572 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.45□□□□□ -2.18
COL4A2P08572 RPL12P25-201ENST00000455592 494 ntBASIC1.45□□□□□ -2.18
COL4A2P08572 AL049829.1-201ENST00000465411 156 ntBASIC1.45□□□□□ -2.18
COL4A2P08572 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.45□□□□□ -2.18
COL4A2P08572 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC1.45□□□□□ -2.18
COL4A2P08572 AC112206.4-201ENST00000515142 405 ntBASIC1.45□□□□□ -2.18
COL4A2P08572 RNU6-150P-201ENST00000516237 95 ntBASIC1.45□□□□□ -2.18
COL4A2P08572 AP002748.2-201ENST00000528671 348 ntBASIC1.45□□□□□ -2.18
COL4A2P08572 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.45□□□□□ -2.18
COL4A2P08572 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.45□□□□□ -2.18
COL4A2P08572 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
COL4A2P08572 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
COL4A2P08572 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.45□□□□□ -2.18
COL4A2P08572 NACAP3-201ENST00000552100 481 ntBASIC1.45□□□□□ -2.18
COL4A2P08572 MTCYBP23-201ENST00000558717 1102 ntBASIC1.45□□□□□ -2.18
COL4A2P08572 MIR5194-201ENST00000582634 120 ntBASIC1.45□□□□□ -2.18
COL4A2P08572 HMGN2P15-201ENST00000585707 270 ntBASIC1.45□□□□□ -2.18
COL4A2P08572 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.45□□□□□ -2.18
COL4A2P08572 AC018645.2-201ENST00000609151 472 ntBASIC1.45□□□□□ -2.18
COL4A2P08572 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.45□□□□□ -2.18
COL4A2P08572 AL133445.2-201ENST00000611191 527 ntBASIC1.45□□□□□ -2.18
COL4A2P08572 MIR6840-201ENST00000611937 71 ntBASIC1.45□□□□□ -2.18
COL4A2P08572 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.45□□□□□ -2.18
COL4A2P08572 AC140725.3-201ENST00000616193 880 ntBASIC1.45□□□□□ -2.18
COL4A2P08572 AL049777.1-201ENST00000622740 518 ntBASIC1.45□□□□□ -2.18
COL4A2P08572 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
COL4A2P08572 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
COL4A2P08572 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.45□□□□□ -2.18
COL4A2P08572 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
COL4A2P08572 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.44□□□□□ -2.18
COL4A2P08572 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
COL4A2P08572 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
COL4A2P08572 RNU5E-10P-201ENST00000363506 118 ntBASIC1.44□□□□□ -2.18
COL4A2P08572 RNU6-741P-201ENST00000383889 107 ntBASIC1.44□□□□□ -2.18
COL4A2P08572 Y_RNA.465-201ENST00000384293 102 ntBASIC1.44□□□□□ -2.18
COL4A2P08572 MIR888-201ENST00000401186 77 ntBASIC1.44□□□□□ -2.18
COL4A2P08572 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.44□□□□□ -2.18
COL4A2P08572 MTATP6P20-201ENST00000414147 562 ntBASIC1.44□□□□□ -2.18
COL4A2P08572 AC074117.2-201ENST00000417130 397 ntBASIC1.44□□□□□ -2.18
COL4A2P08572 RPS3AP37-201ENST00000419176 745 ntBASIC1.44□□□□□ -2.18
COL4A2P08572 AL953862.1-201ENST00000423016 168 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms