Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.89□□□□□ -2.11
CD74P04233 AC108747.1-201ENST00000609508 535 ntBASIC1.89□□□□□ -2.11
CD74P04233 AC009831.4-201ENST00000620744 325 ntBASIC1.89□□□□□ -2.11
CD74P04233 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
CD74P04233 AC093591.3-201ENST00000634516 308 ntBASIC1.89□□□□□ -2.11
CD74P04233 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CD74P04233 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CD74P04233 AL359851.1-201ENST00000569460 4997 ntBASIC1.88□□□□□ -2.11
CD74P04233 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.88□□□□□ -2.11
CD74P04233 UBE2L2-201ENST00000254302 429 ntBASIC1.88□□□□□ -2.11
CD74P04233 SNORA16B-201ENST00000364674 135 ntBASIC1.88□□□□□ -2.11
CD74P04233 RNA5SP138-201ENST00000365098 114 ntBASIC1.88□□□□□ -2.11
CD74P04233 RNY3P13-201ENST00000365542 102 ntBASIC1.88□□□□□ -2.11
CD74P04233 RNU6-701P-201ENST00000384059 107 ntBASIC1.88□□□□□ -2.11
CD74P04233 RNU2-52P-201ENST00000410680 190 ntBASIC1.88□□□□□ -2.11
CD74P04233 HNRNPDLP1-201ENST00000412834 550 ntBASIC1.88□□□□□ -2.11
CD74P04233 ELOCP17-201ENST00000414751 326 ntBASIC1.88□□□□□ -2.11
CD74P04233 USP9YP13-201ENST00000417797 480 ntBASIC1.88□□□□□ -2.11
CD74P04233 AL139413.1-201ENST00000421309 217 ntBASIC1.88□□□□□ -2.11
CD74P04233 RPS27AP14-201ENST00000422868 454 ntBASIC1.88□□□□□ -2.11
CD74P04233 SRIP2-201ENST00000428470 166 ntBASIC1.88□□□□□ -2.11
CD74P04233 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.88□□□□□ -2.11
CD74P04233 SNRPEP9-201ENST00000436794 238 ntBASIC1.88□□□□□ -2.11
CD74P04233 MTND5P2-201ENST00000442927 1142 ntBASIC1.88□□□□□ -2.11
CD74P04233 PSPHP1-201ENST00000450062 261 ntBASIC1.88□□□□□ -2.11
CD74P04233 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC1.88□□□□□ -2.11
CD74P04233 RPL37P6-201ENST00000460682 294 ntBASIC1.88□□□□□ -2.11
CD74P04233 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.88□□□□□ -2.11
CD74P04233 AC025033.1-201ENST00000463883 194 ntBASIC1.88□□□□□ -2.11
CD74P04233 RPF2P2-201ENST00000504693 896 ntBASIC1.88□□□□□ -2.11
CD74P04233 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.88□□□□□ -2.11
CD74P04233 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.88□□□□□ -2.11
CD74P04233 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.88□□□□□ -2.11
CD74P04233 RN7SKP287-201ENST00000516546 266 ntBASIC1.88□□□□□ -2.11
CD74P04233 RNA5SP165-201ENST00000517142 115 ntBASIC1.88□□□□□ -2.11
CD74P04233 RN7SKP258-201ENST00000517151 304 ntBASIC1.88□□□□□ -2.11
CD74P04233 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.88□□□□□ -2.11
CD74P04233 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.88□□□□□ -2.11
CD74P04233 NACAP3-201ENST00000552100 481 ntBASIC1.88□□□□□ -2.11
CD74P04233 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.88□□□□□ -2.11
CD74P04233 MIR4435-1-201ENST00000582552 80 ntBASIC1.88□□□□□ -2.11
CD74P04233 MIR4448-201ENST00000584360 86 ntBASIC1.88□□□□□ -2.11
CD74P04233 AC098826.3-201ENST00000603823 466 ntBASIC1.88□□□□□ -2.11
CD74P04233 AC112187.2-201ENST00000604345 283 ntBASIC1.88□□□□□ -2.11
CD74P04233 AC093424.1-201ENST00000604999 338 ntBASIC1.88□□□□□ -2.11
CD74P04233 AC026790.2-201ENST00000606282 430 ntBASIC1.88□□□□□ -2.11
CD74P04233 AC239868.4-201ENST00000608318 671 ntBASIC1.88□□□□□ -2.11
CD74P04233 AC107294.1-201ENST00000609524 467 ntBASIC1.88□□□□□ -2.11
CD74P04233 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CD74P04233 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.88□□□□□ -2.11
CD74P04233 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.88□□□□□ -2.11
CD74P04233 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.88□□□□□ -2.11
CD74P04233 AC009159.1-201ENST00000618386 642 ntBASIC1.88□□□□□ -2.11
CD74P04233 AC017037.3-201ENST00000625016 472 ntBASIC1.88□□□□□ -2.11
CD74P04233 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
CD74P04233 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.88□□□□□ -2.11
CD74P04233 AL445523.1-201ENST00000451184 1362 ntBASIC1.87□□□□□ -2.11
CD74P04233 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
CD74P04233 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.87□□□□□ -2.11
CD74P04233 RNU5F-7P-201ENST00000363696 115 ntBASIC1.87□□□□□ -2.11
CD74P04233 U3.12-201ENST00000364498 214 ntBASIC1.87□□□□□ -2.11
CD74P04233 RNY4P16-201ENST00000364768 94 ntBASIC1.87□□□□□ -2.11
CD74P04233 SNORA48.3-201ENST00000391081 134 ntBASIC1.87□□□□□ -2.11
CD74P04233 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.87□□□□□ -2.11
CD74P04233 RPL23AP39-201ENST00000415533 405 ntBASIC1.87□□□□□ -2.11
CD74P04233 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.87□□□□□ -2.11
CD74P04233 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.87□□□□□ -2.11
CD74P04233 AC104651.1-201ENST00000427559 735 ntBASIC1.87□□□□□ -2.11
CD74P04233 ELOCP14-201ENST00000428070 331 ntBASIC1.87□□□□□ -2.11
CD74P04233 AC093106.2-201ENST00000428212 385 ntBASIC1.87□□□□□ -2.11
CD74P04233 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.87□□□□□ -2.11
CD74P04233 MTND1P28-201ENST00000435623 950 ntBASIC1.87□□□□□ -2.11
CD74P04233 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1.87□□□□□ -2.11
CD74P04233 ELOCP7-201ENST00000439968 331 ntBASIC1.87□□□□□ -2.11
CD74P04233 GPM6BP3-201ENST00000442797 145 ntBASIC1.87□□□□□ -2.11
CD74P04233 RPL23AP7-203ENST00000449021 469 ntBASIC1.87□□□□□ -2.11
CD74P04233 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.87□□□□□ -2.11
CD74P04233 RPS3P1-201ENST00000456781 192 ntBASIC1.87□□□□□ -2.11
CD74P04233 AC013267.1-201ENST00000458227 267 ntBASIC1.87□□□□□ -2.11
CD74P04233 AC126389.1-201ENST00000477436 290 ntBASIC1.87□□□□□ -2.11
CD74P04233 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.87□□□□□ -2.11
CD74P04233 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.87□□□□□ -2.11
CD74P04233 SCARNA3-201ENST00000517097 143 ntBASIC1.87□□□□□ -2.11
CD74P04233 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
CD74P04233 AC021269.2-201ENST00000532318 330 ntBASIC1.87□□□□□ -2.11
CD74P04233 AC010186.2-204ENST00000537668 439 ntBASIC1.87□□□□□ -2.11
CD74P04233 ZNF321P-202ENST00000550843 495 ntBASIC1.87□□□□□ -2.11
CD74P04233 MIR3146-201ENST00000580367 79 ntBASIC1.87□□□□□ -2.11
CD74P04233 AC008751.2-201ENST00000597885 980 ntBASIC1.87□□□□□ -2.11
CD74P04233 KC877982.1-201ENST00000602313 470 ntBASIC1.87□□□□□ -2.11
CD74P04233 AL353778.1-201ENST00000603149 408 ntBASIC1.87□□□□□ -2.11
CD74P04233 AP000403.1-201ENST00000603349 851 ntBASIC1.87□□□□□ -2.11
CD74P04233 MTCYBP22-201ENST00000603788 447 ntBASIC1.87□□□□□ -2.11
CD74P04233 AL161798.1-201ENST00000604630 131 ntBASIC1.87□□□□□ -2.11
CD74P04233 AP000860.1-201ENST00000605250 559 ntBASIC1.87□□□□□ -2.11
CD74P04233 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.87□□□□□ -2.11
CD74P04233 AC004520.1-201ENST00000608362 1413 ntBASIC1.87□□□□□ -2.11
CD74P04233 AC013412.1-201ENST00000610687 192 ntBASIC1.87□□□□□ -2.11
CD74P04233 AL161423.1-201ENST00000613700 262 ntBASIC1.87□□□□□ -2.11
CD74P04233 AC006338.1-201ENST00000618453 749 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms