Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC245014.2-201ENST00000603689 287 ntBASIC2.9□□□□□ -1.95
COL2A1P02458 AC112187.2-201ENST00000604345 283 ntBASIC2.9□□□□□ -1.95
COL2A1P02458 AC246785.4-201ENST00000605374 287 ntBASIC2.9□□□□□ -1.95
COL2A1P02458 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.9□□□□□ -1.95
COL2A1P02458 AC006504.8-201ENST00000621046 635 ntBASIC2.9□□□□□ -1.95
COL2A1P02458 AL160413.1-201ENST00000622780 310 ntBASIC2.9□□□□□ -1.95
COL2A1P02458 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
COL2A1P02458 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.89□□□□□ -1.95
COL2A1P02458 PNPT1P2-201ENST00000456768 2050 ntBASIC2.89□□□□□ -1.95
COL2A1P02458 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC2.89□□□□□ -1.95
COL2A1P02458 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
COL2A1P02458 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
COL2A1P02458 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
COL2A1P02458 SNORA51.12-201ENST00000384448 134 ntBASIC2.89□□□□□ -1.95
COL2A1P02458 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
COL2A1P02458 EI24P2-201ENST00000397776 1076 ntBASIC2.89□□□□□ -1.95
COL2A1P02458 TMSB4XP8-201ENST00000402089 135 ntBASIC2.89□□□□□ -1.95
COL2A1P02458 TMSB4XP6-201ENST00000415187 135 ntBASIC2.89□□□□□ -1.95
COL2A1P02458 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.89□□□□□ -1.95
COL2A1P02458 AL137014.1-201ENST00000420490 1226 ntBASIC2.89□□□□□ -1.95
COL2A1P02458 TMSB4XP1-201ENST00000424567 135 ntBASIC2.89□□□□□ -1.95
COL2A1P02458 MTCO1P39-201ENST00000426148 480 ntBASIC2.89□□□□□ -1.95
COL2A1P02458 RPL23AP30-201ENST00000432419 501 ntBASIC2.89□□□□□ -1.95
COL2A1P02458 RPS12P2-201ENST00000439728 269 ntBASIC2.89□□□□□ -1.95
COL2A1P02458 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.89□□□□□ -1.95
COL2A1P02458 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.89□□□□□ -1.95
COL2A1P02458 RPS15AP1-201ENST00000457423 391 ntBASIC2.89□□□□□ -1.95
COL2A1P02458 AC106872.3-201ENST00000495104 446 ntBASIC2.89□□□□□ -1.95
COL2A1P02458 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.89□□□□□ -1.95
COL2A1P02458 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.89□□□□□ -1.95
COL2A1P02458 AC093809.1-201ENST00000509155 340 ntBASIC2.89□□□□□ -1.95
COL2A1P02458 AC110792.2-201ENST00000510278 224 ntBASIC2.89□□□□□ -1.95
COL2A1P02458 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.89□□□□□ -1.95
COL2A1P02458 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.89□□□□□ -1.95
COL2A1P02458 BTF3P12-201ENST00000519620 469 ntBASIC2.89□□□□□ -1.95
COL2A1P02458 AC107953.1-201ENST00000522216 297 ntBASIC2.89□□□□□ -1.95
COL2A1P02458 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC2.89□□□□□ -1.95
COL2A1P02458 OR5B19P-201ENST00000531766 928 ntBASIC2.89□□□□□ -1.95
COL2A1P02458 AL442663.2-201ENST00000554385 511 ntBASIC2.89□□□□□ -1.95
COL2A1P02458 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.89□□□□□ -1.95
COL2A1P02458 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.89□□□□□ -1.95
COL2A1P02458 MIR3671-201ENST00000580455 88 ntBASIC2.89□□□□□ -1.95
COL2A1P02458 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC2.89□□□□□ -1.95
COL2A1P02458 AC013553.2-201ENST00000604244 589 ntBASIC2.89□□□□□ -1.95
COL2A1P02458 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.89□□□□□ -1.95
COL2A1P02458 AC024940.5-201ENST00000622889 474 ntBASIC2.89□□□□□ -1.95
COL2A1P02458 AP003122.6-201ENST00000623831 495 ntBASIC2.89□□□□□ -1.95
COL2A1P02458 MIR1302-1-201ENST00000637932 143 ntBASIC2.89□□□□□ -1.95
COL2A1P02458 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
COL2A1P02458 AC006020.1-201ENST00000420179 1854 ntBASIC2.89□□□□□ -1.95
COL2A1P02458 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
COL2A1P02458 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.88□□□□□ -1.95
COL2A1P02458 AC107021.2-201ENST00000567714 2095 ntBASIC2.88□□□□□ -1.95
COL2A1P02458 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
COL2A1P02458 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
COL2A1P02458 NACAP2-201ENST00000318548 624 ntBASIC2.88□□□□□ -1.95
COL2A1P02458 AL161781.1-201ENST00000354277 403 ntBASIC2.88□□□□□ -1.95
COL2A1P02458 RNU6-451P-201ENST00000362921 107 ntBASIC2.88□□□□□ -1.95
COL2A1P02458 RNU6-251P-201ENST00000363235 104 ntBASIC2.88□□□□□ -1.95
COL2A1P02458 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
COL2A1P02458 SNORA69-201ENST00000383895 132 ntBASIC2.88□□□□□ -1.95
COL2A1P02458 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
COL2A1P02458 RNA5SP210-201ENST00000391034 120 ntBASIC2.88□□□□□ -1.95
COL2A1P02458 AL162578.1-201ENST00000406202 378 ntBASIC2.88□□□□□ -1.95
COL2A1P02458 NDUFB4P5-201ENST00000415445 361 ntBASIC2.88□□□□□ -1.95
COL2A1P02458 MTND3P17-201ENST00000416968 344 ntBASIC2.88□□□□□ -1.95
COL2A1P02458 AC133104.1-201ENST00000429100 218 ntBASIC2.88□□□□□ -1.95
COL2A1P02458 YWHAZP8-201ENST00000436935 731 ntBASIC2.88□□□□□ -1.95
COL2A1P02458 AL031663.1-201ENST00000437445 219 ntBASIC2.88□□□□□ -1.95
COL2A1P02458 AC104389.3-201ENST00000445629 235 ntBASIC2.88□□□□□ -1.95
COL2A1P02458 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.88□□□□□ -1.95
COL2A1P02458 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.88□□□□□ -1.95
COL2A1P02458 AC105029.1-201ENST00000520250 669 ntBASIC2.88□□□□□ -1.95
COL2A1P02458 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.88□□□□□ -1.95
COL2A1P02458 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.88□□□□□ -1.95
COL2A1P02458 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.88□□□□□ -1.95
COL2A1P02458 AC068714.1-201ENST00000559623 800 ntBASIC2.88□□□□□ -1.95
COL2A1P02458 MIR3167-201ENST00000579623 85 ntBASIC2.88□□□□□ -1.95
COL2A1P02458 AC018638.8-201ENST00000588755 281 ntBASIC2.88□□□□□ -1.95
COL2A1P02458 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.88□□□□□ -1.95
COL2A1P02458 AC007687.1-201ENST00000602704 304 ntBASIC2.88□□□□□ -1.95
COL2A1P02458 AC040896.1-201ENST00000613819 479 ntBASIC2.88□□□□□ -1.95
COL2A1P02458 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.88□□□□□ -1.95
COL2A1P02458 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.88□□□□□ -1.95
COL2A1P02458 C2orf27A-204ENST00000623058 969 ntBASIC2.88□□□□□ -1.95
COL2A1P02458 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
COL2A1P02458 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.88□□□□□ -1.95
COL2A1P02458 RNU5E-1-201ENST00000362477 120 ntBASIC2.87□□□□□ -1.95
COL2A1P02458 Y_RNA.46-201ENST00000362695 102 ntBASIC2.87□□□□□ -1.95
COL2A1P02458 RNY3P3-201ENST00000363816 102 ntBASIC2.87□□□□□ -1.95
COL2A1P02458 MRPL42P2-201ENST00000403169 426 ntBASIC2.87□□□□□ -1.95
COL2A1P02458 RNU6-1148P-201ENST00000410992 104 ntBASIC2.87□□□□□ -1.95
COL2A1P02458 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC2.87□□□□□ -1.95
COL2A1P02458 AC234782.4-201ENST00000417646 1048 ntBASIC2.87□□□□□ -1.95
COL2A1P02458 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.87□□□□□ -1.95
COL2A1P02458 AL353597.2-202ENST00000434901 373 ntBASIC2.87□□□□□ -1.95
COL2A1P02458 NDUFA5P4-201ENST00000436704 385 ntBASIC2.87□□□□□ -1.95
COL2A1P02458 AL138799.3-201ENST00000438968 350 ntBASIC2.87□□□□□ -1.95
COL2A1P02458 BRK1P2-201ENST00000442875 223 ntBASIC2.87□□□□□ -1.95
COL2A1P02458 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms