Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 HMGN2P31-201ENST00000432430 273 ntBASIC3.9□□□□□ -1.79
CDKL5O76039 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.9□□□□□ -1.79
CDKL5O76039 BX679664.1-201ENST00000434429 253 ntBASIC3.9□□□□□ -1.79
CDKL5O76039 AC005019.1-201ENST00000436455 431 ntBASIC3.9□□□□□ -1.79
CDKL5O76039 Y_RNA.631-201ENST00000459607 101 ntBASIC3.9□□□□□ -1.79
CDKL5O76039 RPL21P8-201ENST00000465083 535 ntBASIC3.9□□□□□ -1.79
CDKL5O76039 RPS4XP22-201ENST00000480755 780 ntBASIC3.9□□□□□ -1.79
CDKL5O76039 RN7SL432P-201ENST00000484057 298 ntBASIC3.9□□□□□ -1.79
CDKL5O76039 TRBVA-201ENST00000498804 316 ntBASIC3.9□□□□□ -1.79
CDKL5O76039 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CDKL5O76039 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.9□□□□□ -1.79
CDKL5O76039 AC090136.1-201ENST00000520009 240 ntBASIC3.9□□□□□ -1.79
CDKL5O76039 HMGN1P28-201ENST00000521340 364 ntBASIC3.9□□□□□ -1.79
CDKL5O76039 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.9□□□□□ -1.79
CDKL5O76039 OR11H5P-201ENST00000554039 926 ntBASIC3.9□□□□□ -1.79
CDKL5O76039 AL163153.1-201ENST00000554223 283 ntBASIC3.9□□□□□ -1.79
CDKL5O76039 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.9□□□□□ -1.79
CDKL5O76039 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.9□□□□□ -1.79
CDKL5O76039 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.9□□□□□ -1.79
CDKL5O76039 AC008521.1-201ENST00000587471 187 ntBASIC3.9□□□□□ -1.79
CDKL5O76039 AC012669.1-201ENST00000603209 283 ntBASIC3.9□□□□□ -1.79
CDKL5O76039 DPPA3P3-201ENST00000603842 430 ntBASIC3.9□□□□□ -1.79
CDKL5O76039 AL080274.1-201ENST00000605565 220 ntBASIC3.9□□□□□ -1.79
CDKL5O76039 SNHG22-203ENST00000617833 660 ntBASIC3.9□□□□□ -1.79
CDKL5O76039 AL589994.2-201ENST00000621124 579 ntBASIC3.9□□□□□ -1.79
CDKL5O76039 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
CDKL5O76039 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
CDKL5O76039 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
CDKL5O76039 SRP72P2-201ENST00000344851 1979 ntBASIC3.89□□□□□ -1.79
CDKL5O76039 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.89□□□□□ -1.79
CDKL5O76039 AL049781.1-201ENST00000623195 3585 ntBASIC3.89□□□□□ -1.79
CDKL5O76039 RNA5SP50-201ENST00000363731 107 ntBASIC3.89□□□□□ -1.79
CDKL5O76039 SNORD113-7-201ENST00000363762 77 ntBASIC3.89□□□□□ -1.79
CDKL5O76039 RNU6-82P-201ENST00000363970 107 ntBASIC3.89□□□□□ -1.79
CDKL5O76039 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
CDKL5O76039 RNU6-946P-201ENST00000383878 107 ntBASIC3.89□□□□□ -1.79
CDKL5O76039 RN7SKP158-201ENST00000410453 326 ntBASIC3.89□□□□□ -1.79
CDKL5O76039 RNU6-370P-201ENST00000411008 104 ntBASIC3.89□□□□□ -1.79
CDKL5O76039 RNA5SP31-201ENST00000411144 127 ntBASIC3.89□□□□□ -1.79
CDKL5O76039 GOT2P5-201ENST00000433995 546 ntBASIC3.89□□□□□ -1.79
CDKL5O76039 RPL21P112-201ENST00000434403 463 ntBASIC3.89□□□□□ -1.79
CDKL5O76039 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.89□□□□□ -1.79
CDKL5O76039 MTCO3P45-201ENST00000443036 613 ntBASIC3.89□□□□□ -1.79
CDKL5O76039 RPS15AP27-201ENST00000449183 343 ntBASIC3.89□□□□□ -1.79
CDKL5O76039 AC107399.1-201ENST00000451226 265 ntBASIC3.89□□□□□ -1.79
CDKL5O76039 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.89□□□□□ -1.79
CDKL5O76039 HMGN1P18-201ENST00000457642 277 ntBASIC3.89□□□□□ -1.79
CDKL5O76039 RNU7-152P-201ENST00000458982 64 ntBASIC3.89□□□□□ -1.79
CDKL5O76039 AC010631.1-201ENST00000474150 156 ntBASIC3.89□□□□□ -1.79
CDKL5O76039 RNU6-566P-201ENST00000516790 107 ntBASIC3.89□□□□□ -1.79
CDKL5O76039 Y_RNA.711-201ENST00000516993 102 ntBASIC3.89□□□□□ -1.79
CDKL5O76039 RNU6-685P-201ENST00000517088 95 ntBASIC3.89□□□□□ -1.79
CDKL5O76039 APOOP3-201ENST00000536787 586 ntBASIC3.89□□□□□ -1.79
CDKL5O76039 AC004024.1-201ENST00000549244 247 ntBASIC3.89□□□□□ -1.79
CDKL5O76039 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.89□□□□□ -1.79
CDKL5O76039 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CDKL5O76039 AC004696.1-201ENST00000614345 607 ntBASIC3.89□□□□□ -1.79
CDKL5O76039 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.89□□□□□ -1.79
CDKL5O76039 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
CDKL5O76039 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
CDKL5O76039 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CDKL5O76039 AC103710.2-202ENST00000641454 2853 ntBASIC3.88□□□□□ -1.79
CDKL5O76039 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.88□□□□□ -1.79
CDKL5O76039 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CDKL5O76039 Y_RNA.445-201ENST00000384168 102 ntBASIC3.88□□□□□ -1.79
CDKL5O76039 RNU6-1127P-201ENST00000384580 107 ntBASIC3.88□□□□□ -1.79
CDKL5O76039 MIR1250-201ENST00000408098 113 ntBASIC3.88□□□□□ -1.79
CDKL5O76039 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.88□□□□□ -1.79
CDKL5O76039 AC245054.2-201ENST00000415639 319 ntBASIC3.88□□□□□ -1.79
CDKL5O76039 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.88□□□□□ -1.79
CDKL5O76039 SCARNA18-201ENST00000459004 134 ntBASIC3.88□□□□□ -1.79
CDKL5O76039 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.88□□□□□ -1.79
CDKL5O76039 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CDKL5O76039 RPL7P23-201ENST00000493874 747 ntBASIC3.88□□□□□ -1.79
CDKL5O76039 RPL23AP55-201ENST00000498163 452 ntBASIC3.88□□□□□ -1.79
CDKL5O76039 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.88□□□□□ -1.79
CDKL5O76039 AC026801.2-201ENST00000515352 425 ntBASIC3.88□□□□□ -1.79
CDKL5O76039 RNU6-256P-201ENST00000516747 97 ntBASIC3.88□□□□□ -1.79
CDKL5O76039 COPS8P3-201ENST00000526024 482 ntBASIC3.88□□□□□ -1.79
CDKL5O76039 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.88□□□□□ -1.79
CDKL5O76039 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.88□□□□□ -1.79
CDKL5O76039 AC005476.1-201ENST00000554427 397 ntBASIC3.88□□□□□ -1.79
CDKL5O76039 RPL23AP84-201ENST00000571193 464 ntBASIC3.88□□□□□ -1.79
CDKL5O76039 MIR4790-201ENST00000577799 79 ntBASIC3.88□□□□□ -1.79
CDKL5O76039 MIR3672-201ENST00000584290 82 ntBASIC3.88□□□□□ -1.79
CDKL5O76039 MIR3922-201ENST00000585192 84 ntBASIC3.88□□□□□ -1.79
CDKL5O76039 AC006504.6-201ENST00000590142 199 ntBASIC3.88□□□□□ -1.79
CDKL5O76039 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.88□□□□□ -1.79
CDKL5O76039 AL670379.6-201ENST00000603753 252 ntBASIC3.88□□□□□ -1.79
CDKL5O76039 AC008162.1-201ENST00000604718 254 ntBASIC3.88□□□□□ -1.79
CDKL5O76039 AL670379.1-201ENST00000604752 252 ntBASIC3.88□□□□□ -1.79
CDKL5O76039 AL670379.5-201ENST00000605253 252 ntBASIC3.88□□□□□ -1.79
CDKL5O76039 AL670379.8-201ENST00000605353 252 ntBASIC3.88□□□□□ -1.79
CDKL5O76039 AL670379.7-201ENST00000605823 252 ntBASIC3.88□□□□□ -1.79
CDKL5O76039 AL355802.3-201ENST00000607571 545 ntBASIC3.88□□□□□ -1.79
CDKL5O76039 uc_338.1-201ENST00000612113 180 ntBASIC3.88□□□□□ -1.79
CDKL5O76039 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.88□□□□□ -1.79
CDKL5O76039 PLCE1P1-201ENST00000622094 305 ntBASIC3.88□□□□□ -1.79
CDKL5O76039 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.88□□□□□ -1.79
CDKL5O76039 MTCO1P12-201ENST00000414273 1543 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms