Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.86□□□□□ -2.11
DFFAO00273 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.86□□□□□ -2.11
DFFAO00273 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.86□□□□□ -2.11
DFFAO00273 RNU5E-10P-201ENST00000363506 118 ntBASIC1.86□□□□□ -2.11
DFFAO00273 RNU6-512P-201ENST00000364438 103 ntBASIC1.86□□□□□ -2.11
DFFAO00273 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.86□□□□□ -2.11
DFFAO00273 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
DFFAO00273 RNU6-19P-201ENST00000384718 107 ntBASIC1.86□□□□□ -2.11
DFFAO00273 MIR147B-201ENST00000390185 80 ntBASIC1.86□□□□□ -2.11
DFFAO00273 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
DFFAO00273 SUMO2P12-201ENST00000405924 140 ntBASIC1.86□□□□□ -2.11
DFFAO00273 MTATP6P20-201ENST00000414147 562 ntBASIC1.86□□□□□ -2.11
DFFAO00273 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.86□□□□□ -2.11
DFFAO00273 PTGES3P4-201ENST00000426243 356 ntBASIC1.86□□□□□ -2.11
DFFAO00273 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.86□□□□□ -2.11
DFFAO00273 EEF1A1P39-201ENST00000440791 250 ntBASIC1.86□□□□□ -2.11
DFFAO00273 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.86□□□□□ -2.11
DFFAO00273 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
DFFAO00273 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
DFFAO00273 RNA5SP233-201ENST00000459153 113 ntBASIC1.86□□□□□ -2.11
DFFAO00273 AP001324.2-201ENST00000461163 319 ntBASIC1.86□□□□□ -2.11
DFFAO00273 AC055731.1-201ENST00000474387 401 ntBASIC1.86□□□□□ -2.11
DFFAO00273 RPS29P11-201ENST00000496507 171 ntBASIC1.86□□□□□ -2.11
DFFAO00273 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.86□□□□□ -2.11
DFFAO00273 AC008526.1-201ENST00000509149 338 ntBASIC1.86□□□□□ -2.11
DFFAO00273 AF213884.2-201ENST00000510417 903 ntBASIC1.86□□□□□ -2.11
DFFAO00273 SNORA31.3-201ENST00000516029 96 ntBASIC1.86□□□□□ -2.11
DFFAO00273 RNA5SP182-201ENST00000516064 82 ntBASIC1.86□□□□□ -2.11
DFFAO00273 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.86□□□□□ -2.11
DFFAO00273 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.86□□□□□ -2.11
DFFAO00273 AP000873.5-201ENST00000533906 236 ntBASIC1.86□□□□□ -2.11
DFFAO00273 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.86□□□□□ -2.11
DFFAO00273 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.86□□□□□ -2.11
DFFAO00273 OR11H5P-201ENST00000554039 926 ntBASIC1.86□□□□□ -2.11
DFFAO00273 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.86□□□□□ -2.11
DFFAO00273 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.86□□□□□ -2.11
DFFAO00273 AP001269.3-201ENST00000588718 329 ntBASIC1.86□□□□□ -2.11
DFFAO00273 AC006386.1-201ENST00000619436 415 ntBASIC1.86□□□□□ -2.11
DFFAO00273 AP003400.5-201ENST00000624827 617 ntBASIC1.86□□□□□ -2.11
DFFAO00273 AL138960.2-201ENST00000625145 535 ntBASIC1.86□□□□□ -2.11
DFFAO00273 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
DFFAO00273 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
DFFAO00273 AC099786.3-201ENST00000565735 1410 ntBASIC1.85□□□□□ -2.11
DFFAO00273 AL356292.1-201ENST00000283110 373 ntBASIC1.85□□□□□ -2.11
DFFAO00273 NACAP2-201ENST00000318548 624 ntBASIC1.85□□□□□ -2.11
DFFAO00273 RNU6-462P-201ENST00000362659 105 ntBASIC1.85□□□□□ -2.11
DFFAO00273 SNORD116.1-201ENST00000365628 92 ntBASIC1.85□□□□□ -2.11
DFFAO00273 Y_RNA.465-201ENST00000384293 102 ntBASIC1.85□□□□□ -2.11
DFFAO00273 MIR9-3-201ENST00000385084 90 ntBASIC1.85□□□□□ -2.11
DFFAO00273 RNU6-1140P-201ENST00000410517 106 ntBASIC1.85□□□□□ -2.11
DFFAO00273 RNA5SP489-201ENST00000410986 109 ntBASIC1.85□□□□□ -2.11
DFFAO00273 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.85□□□□□ -2.11
DFFAO00273 RPS3AP37-201ENST00000419176 745 ntBASIC1.85□□□□□ -2.11
DFFAO00273 AC104651.1-201ENST00000427559 735 ntBASIC1.85□□□□□ -2.11
DFFAO00273 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.85□□□□□ -2.11
DFFAO00273 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.85□□□□□ -2.11
DFFAO00273 AC016691.1-201ENST00000441321 413 ntBASIC1.85□□□□□ -2.11
DFFAO00273 AC010095.1-201ENST00000443543 144 ntBASIC1.85□□□□□ -2.11
DFFAO00273 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.85□□□□□ -2.11
DFFAO00273 snoU13.15-201ENST00000459407 104 ntBASIC1.85□□□□□ -2.11
DFFAO00273 snoU13.26-201ENST00000459452 105 ntBASIC1.85□□□□□ -2.11
DFFAO00273 RN7SL274P-201ENST00000492268 272 ntBASIC1.85□□□□□ -2.11
DFFAO00273 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.85□□□□□ -2.11
DFFAO00273 MTND4P2-201ENST00000507767 1203 ntBASIC1.85□□□□□ -2.11
DFFAO00273 RNU6-64P-201ENST00000517119 105 ntBASIC1.85□□□□□ -2.11
DFFAO00273 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.85□□□□□ -2.11
DFFAO00273 MIR4419B-201ENST00000577260 68 ntBASIC1.85□□□□□ -2.11
DFFAO00273 MIR4293-201ENST00000584305 78 ntBASIC1.85□□□□□ -2.11
DFFAO00273 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.85□□□□□ -2.11
DFFAO00273 U4atac.1-201ENST00000618345 95 ntBASIC1.85□□□□□ -2.11
DFFAO00273 SDR42E1P4-201ENST00000620894 481 ntBASIC1.85□□□□□ -2.11
DFFAO00273 AC012150.2-201ENST00000621300 544 ntBASIC1.85□□□□□ -2.11
DFFAO00273 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.85□□□□□ -2.11
DFFAO00273 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.85□□□□□ -2.11
DFFAO00273 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
DFFAO00273 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
DFFAO00273 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
DFFAO00273 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
DFFAO00273 MIR1289-2-201ENST00000408360 111 ntBASIC1.84□□□□□ -2.11
DFFAO00273 RN7SKP158-201ENST00000410453 326 ntBASIC1.84□□□□□ -2.11
DFFAO00273 ZNF90P2-204ENST00000419323 1075 ntBASIC1.84□□□□□ -2.11
DFFAO00273 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.84□□□□□ -2.11
DFFAO00273 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.84□□□□□ -2.11
DFFAO00273 OR6C5P-201ENST00000452388 923 ntBASIC1.84□□□□□ -2.11
DFFAO00273 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.84□□□□□ -2.11
DFFAO00273 AC005410.1-202ENST00000460347 485 ntBASIC1.84□□□□□ -2.11
DFFAO00273 AC139453.3-201ENST00000493276 369 ntBASIC1.84□□□□□ -2.11
DFFAO00273 RPF2P2-201ENST00000504693 896 ntBASIC1.84□□□□□ -2.11
DFFAO00273 AC093281.2-201ENST00000510153 597 ntBASIC1.84□□□□□ -2.11
DFFAO00273 MRPS33P3-201ENST00000513456 322 ntBASIC1.84□□□□□ -2.11
DFFAO00273 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.84□□□□□ -2.11
DFFAO00273 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.84□□□□□ -2.11
DFFAO00273 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.84□□□□□ -2.11
DFFAO00273 AK6P1-201ENST00000540219 478 ntBASIC1.84□□□□□ -2.11
DFFAO00273 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.84□□□□□ -2.11
DFFAO00273 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.84□□□□□ -2.11
DFFAO00273 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.84□□□□□ -2.11
DFFAO00273 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.84□□□□□ -2.11
DFFAO00273 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.84□□□□□ -2.11
DFFAO00273 AL096840.1-201ENST00000603287 93 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms