Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AL451007.1-201ENST00000595491 289 ntBASIC2.8□□□□□ -1.96
CCDC188H7C350 AC245014.2-201ENST00000603689 287 ntBASIC2.8□□□□□ -1.96
CCDC188H7C350 AP000787.2-201ENST00000604432 568 ntBASIC2.8□□□□□ -1.96
CCDC188H7C350 AL137843.1-201ENST00000605078 385 ntBASIC2.8□□□□□ -1.96
CCDC188H7C350 AC246785.4-201ENST00000605374 287 ntBASIC2.8□□□□□ -1.96
CCDC188H7C350 AC024940.5-201ENST00000622889 474 ntBASIC2.8□□□□□ -1.96
CCDC188H7C350 AC010297.1-201ENST00000623948 149 ntBASIC2.8□□□□□ -1.96
CCDC188H7C350 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC188H7C350 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.8□□□□□ -1.96
CCDC188H7C350 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.8□□□□□ -1.96
CCDC188H7C350 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.79□□□□□ -1.96
CCDC188H7C350 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
CCDC188H7C350 AC004520.1-201ENST00000608362 1413 ntBASIC2.79□□□□□ -1.96
CCDC188H7C350 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC188H7C350 AC004944.1-201ENST00000517807 3059 ntBASIC2.79□□□□□ -1.96
CCDC188H7C350 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC188H7C350 RNU6-395P-201ENST00000365662 106 ntBASIC2.79□□□□□ -1.96
CCDC188H7C350 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.79□□□□□ -1.96
CCDC188H7C350 AC114491.1-201ENST00000416095 246 ntBASIC2.79□□□□□ -1.96
CCDC188H7C350 BX295541.1-201ENST00000417774 250 ntBASIC2.79□□□□□ -1.96
CCDC188H7C350 KATNBL1P3-201ENST00000443475 909 ntBASIC2.79□□□□□ -1.96
CCDC188H7C350 AC244505.5-201ENST00000443639 207 ntBASIC2.79□□□□□ -1.96
CCDC188H7C350 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC188H7C350 GZMAP1-201ENST00000503054 631 ntBASIC2.79□□□□□ -1.96
CCDC188H7C350 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.79□□□□□ -1.96
CCDC188H7C350 AC098591.2-201ENST00000510152 315 ntBASIC2.79□□□□□ -1.96
CCDC188H7C350 SCARNA24.1-201ENST00000516465 137 ntBASIC2.79□□□□□ -1.96
CCDC188H7C350 RNU6-1183P-201ENST00000517054 60 ntBASIC2.79□□□□□ -1.96
CCDC188H7C350 SNORA31.19-201ENST00000517079 126 ntBASIC2.79□□□□□ -1.96
CCDC188H7C350 RANP3-201ENST00000530970 276 ntBASIC2.79□□□□□ -1.96
CCDC188H7C350 GLYCAM1-201ENST00000546596 285 ntBASIC2.79□□□□□ -1.96
CCDC188H7C350 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC188H7C350 AC007151.1-201ENST00000572774 483 ntBASIC2.79□□□□□ -1.96
CCDC188H7C350 MIR5092-201ENST00000583139 88 ntBASIC2.79□□□□□ -1.96
CCDC188H7C350 MIR4635-201ENST00000583759 79 ntBASIC2.79□□□□□ -1.96
CCDC188H7C350 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.79□□□□□ -1.96
CCDC188H7C350 AC098848.2-201ENST00000588023 330 ntBASIC2.79□□□□□ -1.96
CCDC188H7C350 AC064872.1-201ENST00000604823 1072 ntBASIC2.79□□□□□ -1.96
CCDC188H7C350 AL670379.4-201ENST00000605279 254 ntBASIC2.79□□□□□ -1.96
CCDC188H7C350 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.79□□□□□ -1.96
CCDC188H7C350 U6.114-201ENST00000636407 96 ntBASIC2.79□□□□□ -1.96
CCDC188H7C350 MIR7515-201ENST00000637837 67 ntBASIC2.79□□□□□ -1.96
CCDC188H7C350 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC188H7C350 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC188H7C350 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.79□□□□□ -1.96
CCDC188H7C350 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.79□□□□□ -1.96
CCDC188H7C350 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.79□□□□□ -1.96
CCDC188H7C350 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC188H7C350 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC188H7C350 SNORA4.3-201ENST00000365564 137 ntBASIC2.78□□□□□ -1.96
CCDC188H7C350 SNORA24.1-201ENST00000384401 135 ntBASIC2.78□□□□□ -1.96
CCDC188H7C350 RNU6-297P-201ENST00000384636 107 ntBASIC2.78□□□□□ -1.96
CCDC188H7C350 FO393413.1-201ENST00000402892 195 ntBASIC2.78□□□□□ -1.96
CCDC188H7C350 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.78□□□□□ -1.96
CCDC188H7C350 AL591704.1-201ENST00000432574 275 ntBASIC2.78□□□□□ -1.96
CCDC188H7C350 GPR143P-201ENST00000434155 205 ntBASIC2.78□□□□□ -1.96
CCDC188H7C350 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.78□□□□□ -1.96
CCDC188H7C350 AL161651.1-201ENST00000440882 223 ntBASIC2.78□□□□□ -1.96
CCDC188H7C350 AL078601.1-201ENST00000444542 271 ntBASIC2.78□□□□□ -1.96
CCDC188H7C350 OSTCP8-201ENST00000445117 448 ntBASIC2.78□□□□□ -1.96
CCDC188H7C350 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC188H7C350 BTF3P15-201ENST00000455606 336 ntBASIC2.78□□□□□ -1.96
CCDC188H7C350 RPL31P3-201ENST00000458430 332 ntBASIC2.78□□□□□ -1.96
CCDC188H7C350 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC188H7C350 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.78□□□□□ -1.96
CCDC188H7C350 AC080014.1-201ENST00000496877 1201 ntBASIC2.78□□□□□ -1.96
CCDC188H7C350 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC188H7C350 AC109927.2-201ENST00000506416 303 ntBASIC2.78□□□□□ -1.96
CCDC188H7C350 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.78□□□□□ -1.96
CCDC188H7C350 AC098799.2-201ENST00000509466 868 ntBASIC2.78□□□□□ -1.96
CCDC188H7C350 Y_RNA.688-201ENST00000516565 95 ntBASIC2.78□□□□□ -1.96
CCDC188H7C350 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.78□□□□□ -1.96
CCDC188H7C350 AP000873.5-201ENST00000533906 236 ntBASIC2.78□□□□□ -1.96
CCDC188H7C350 AC006199.1-201ENST00000548728 219 ntBASIC2.78□□□□□ -1.96
CCDC188H7C350 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC188H7C350 AC106782.4-201ENST00000568264 210 ntBASIC2.78□□□□□ -1.96
CCDC188H7C350 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.78□□□□□ -1.96
CCDC188H7C350 YPEL5P2-201ENST00000605553 359 ntBASIC2.78□□□□□ -1.96
CCDC188H7C350 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.78□□□□□ -1.96
CCDC188H7C350 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
CCDC188H7C350 AC025034.2-201ENST00000623264 286 ntBASIC2.78□□□□□ -1.96
CCDC188H7C350 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.77□□□□□ -1.97
CCDC188H7C350 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.77□□□□□ -1.97
CCDC188H7C350 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
CCDC188H7C350 AL365361.1-201ENST00000566942 3481 ntBASIC2.77□□□□□ -1.97
CCDC188H7C350 Y_RNA.534-201ENST00000384599 112 ntBASIC2.77□□□□□ -1.97
CCDC188H7C350 MIR128-1-201ENST00000384921 82 ntBASIC2.77□□□□□ -1.97
CCDC188H7C350 SNORA48.2-201ENST00000390926 124 ntBASIC2.77□□□□□ -1.97
CCDC188H7C350 RNA5SP210-201ENST00000391034 120 ntBASIC2.77□□□□□ -1.97
CCDC188H7C350 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.77□□□□□ -1.97
CCDC188H7C350 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.77□□□□□ -1.97
CCDC188H7C350 AC009961.2-201ENST00000435771 251 ntBASIC2.77□□□□□ -1.97
CCDC188H7C350 RPS12P2-201ENST00000439728 269 ntBASIC2.77□□□□□ -1.97
CCDC188H7C350 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC188H7C350 AC079781.2-201ENST00000446424 169 ntBASIC2.77□□□□□ -1.97
CCDC188H7C350 HMGN2P10-201ENST00000448085 265 ntBASIC2.77□□□□□ -1.97
CCDC188H7C350 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.77□□□□□ -1.97
CCDC188H7C350 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC188H7C350 AC092001.1-201ENST00000453012 261 ntBASIC2.77□□□□□ -1.97
CCDC188H7C350 AL441985.1-201ENST00000457727 251 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms