Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SMKR1H3BMG3 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.78□□□□□ -2.12
SMKR1H3BMG3 AC006020.1-201ENST00000420179 1854 ntBASIC1.78□□□□□ -2.12
SMKR1H3BMG3 HSPE1P11-201ENST00000339579 310 ntBASIC1.78□□□□□ -2.12
SMKR1H3BMG3 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SMKR1H3BMG3 SNORA16B-201ENST00000364674 135 ntBASIC1.78□□□□□ -2.12
SMKR1H3BMG3 EDDM3CP-201ENST00000415977 425 ntBASIC1.78□□□□□ -2.12
SMKR1H3BMG3 AC009518.2-201ENST00000418056 731 ntBASIC1.78□□□□□ -2.12
SMKR1H3BMG3 MORF4L1P6-201ENST00000418771 268 ntBASIC1.78□□□□□ -2.12
SMKR1H3BMG3 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.78□□□□□ -2.12
SMKR1H3BMG3 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.78□□□□□ -2.12
SMKR1H3BMG3 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC1.78□□□□□ -2.12
SMKR1H3BMG3 RPL35AP12-201ENST00000425362 338 ntBASIC1.78□□□□□ -2.12
SMKR1H3BMG3 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.78□□□□□ -2.12
SMKR1H3BMG3 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.78□□□□□ -2.12
SMKR1H3BMG3 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.78□□□□□ -2.12
SMKR1H3BMG3 RPL23AP30-201ENST00000432419 501 ntBASIC1.78□□□□□ -2.12
SMKR1H3BMG3 PRSS3P4-201ENST00000453323 162 ntBASIC1.78□□□□□ -2.12
SMKR1H3BMG3 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.78□□□□□ -2.12
SMKR1H3BMG3 AC007182.2-201ENST00000489251 402 ntBASIC1.78□□□□□ -2.12
SMKR1H3BMG3 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC1.78□□□□□ -2.12
SMKR1H3BMG3 HIGD1AP13-201ENST00000509878 289 ntBASIC1.78□□□□□ -2.12
SMKR1H3BMG3 AC117522.2-201ENST00000510049 657 ntBASIC1.78□□□□□ -2.12
SMKR1H3BMG3 TPT1P8-201ENST00000510120 555 ntBASIC1.78□□□□□ -2.12
SMKR1H3BMG3 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC1.78□□□□□ -2.12
SMKR1H3BMG3 RNU7-51P-201ENST00000516560 62 ntBASIC1.78□□□□□ -2.12
SMKR1H3BMG3 AP003467.2-201ENST00000520175 319 ntBASIC1.78□□□□□ -2.12
SMKR1H3BMG3 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.78□□□□□ -2.12
SMKR1H3BMG3 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.78□□□□□ -2.12
SMKR1H3BMG3 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC1.78□□□□□ -2.12
SMKR1H3BMG3 AP003122.4-201ENST00000530980 758 ntBASIC1.78□□□□□ -2.12
SMKR1H3BMG3 AC243972.3-201ENST00000539655 198 ntBASIC1.78□□□□□ -2.12
SMKR1H3BMG3 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.78□□□□□ -2.12
SMKR1H3BMG3 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC1.78□□□□□ -2.12
SMKR1H3BMG3 PSMA3P-201ENST00000555485 635 ntBASIC1.78□□□□□ -2.12
SMKR1H3BMG3 PCMTD1P2-201ENST00000565017 355 ntBASIC1.78□□□□□ -2.12
SMKR1H3BMG3 AC105137.2-201ENST00000569073 466 ntBASIC1.78□□□□□ -2.12
SMKR1H3BMG3 AC096772.1-201ENST00000609146 564 ntBASIC1.78□□□□□ -2.12
SMKR1H3BMG3 MIR6840-201ENST00000611937 71 ntBASIC1.78□□□□□ -2.12
SMKR1H3BMG3 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.78□□□□□ -2.12
SMKR1H3BMG3 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.78□□□□□ -2.12
SMKR1H3BMG3 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC1.78□□□□□ -2.12
SMKR1H3BMG3 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
SMKR1H3BMG3 ZNF720P1-201ENST00000562403 1939 ntBASIC1.78□□□□□ -2.13
SMKR1H3BMG3 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
SMKR1H3BMG3 RNU4-28P-201ENST00000364739 141 ntBASIC1.77□□□□□ -2.13
SMKR1H3BMG3 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
SMKR1H3BMG3 RNU6-533P-201ENST00000384144 107 ntBASIC1.77□□□□□ -2.13
SMKR1H3BMG3 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.77□□□□□ -2.13
SMKR1H3BMG3 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.77□□□□□ -2.13
SMKR1H3BMG3 RPL22P18-201ENST00000417197 377 ntBASIC1.77□□□□□ -2.13
SMKR1H3BMG3 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC1.77□□□□□ -2.13
SMKR1H3BMG3 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.77□□□□□ -2.13
SMKR1H3BMG3 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.77□□□□□ -2.13
SMKR1H3BMG3 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC1.77□□□□□ -2.13
SMKR1H3BMG3 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.77□□□□□ -2.13
SMKR1H3BMG3 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.77□□□□□ -2.13
SMKR1H3BMG3 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC1.77□□□□□ -2.13
SMKR1H3BMG3 AC055731.1-201ENST00000474387 401 ntBASIC1.77□□□□□ -2.13
SMKR1H3BMG3 MTND2P14-201ENST00000482139 351 ntBASIC1.77□□□□□ -2.13
SMKR1H3BMG3 AC107222.1-201ENST00000510899 637 ntBASIC1.77□□□□□ -2.13
SMKR1H3BMG3 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.77□□□□□ -2.13
SMKR1H3BMG3 RNA5SP341-201ENST00000516261 117 ntBASIC1.77□□□□□ -2.13
SMKR1H3BMG3 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.77□□□□□ -2.13
SMKR1H3BMG3 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.77□□□□□ -2.13
SMKR1H3BMG3 OR5AQ1P-201ENST00000527596 927 ntBASIC1.77□□□□□ -2.13
SMKR1H3BMG3 AP003461.1-201ENST00000528866 78 ntBASIC1.77□□□□□ -2.13
SMKR1H3BMG3 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC1.77□□□□□ -2.13
SMKR1H3BMG3 ELOCP32-201ENST00000548625 324 ntBASIC1.77□□□□□ -2.13
SMKR1H3BMG3 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.77□□□□□ -2.13
SMKR1H3BMG3 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SMKR1H3BMG3 AC092325.1-201ENST00000566449 554 ntBASIC1.77□□□□□ -2.13
SMKR1H3BMG3 MIR4697-201ENST00000582977 78 ntBASIC1.77□□□□□ -2.13
SMKR1H3BMG3 AL713866.2-201ENST00000603579 219 ntBASIC1.77□□□□□ -2.13
SMKR1H3BMG3 AP002360.4-201ENST00000606980 481 ntBASIC1.77□□□□□ -2.13
SMKR1H3BMG3 AC092953.2-201ENST00000608000 699 ntBASIC1.77□□□□□ -2.13
SMKR1H3BMG3 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.77□□□□□ -2.13
SMKR1H3BMG3 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC1.77□□□□□ -2.13
SMKR1H3BMG3 AC010378.1-201ENST00000619270 362 ntBASIC1.77□□□□□ -2.13
SMKR1H3BMG3 AC092656.1-203ENST00000624134 423 ntBASIC1.77□□□□□ -2.13
SMKR1H3BMG3 AC017037.3-201ENST00000625016 472 ntBASIC1.77□□□□□ -2.13
SMKR1H3BMG3 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC1.77□□□□□ -2.13
SMKR1H3BMG3 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.77□□□□□ -2.13
SMKR1H3BMG3 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.77□□□□□ -2.13
SMKR1H3BMG3 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.77□□□□□ -2.13
SMKR1H3BMG3 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
SMKR1H3BMG3 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
SMKR1H3BMG3 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
SMKR1H3BMG3 AC069528.2-201ENST00000624849 1991 ntBASIC1.76□□□□□ -2.13
SMKR1H3BMG3 OR5J1P-201ENST00000313544 939 ntBASIC1.76□□□□□ -2.13
SMKR1H3BMG3 AC073343.1-201ENST00000328239 651 ntBASIC1.76□□□□□ -2.13
SMKR1H3BMG3 MIRLET7G-201ENST00000362280 84 ntBASIC1.76□□□□□ -2.13
SMKR1H3BMG3 SNORD114-19-201ENST00000363072 75 ntBASIC1.76□□□□□ -2.13
SMKR1H3BMG3 RNU6-501P-201ENST00000364072 100 ntBASIC1.76□□□□□ -2.13
SMKR1H3BMG3 SNORA75B-201ENST00000384053 137 ntBASIC1.76□□□□□ -2.13
SMKR1H3BMG3 MIR561-201ENST00000385216 97 ntBASIC1.76□□□□□ -2.13
SMKR1H3BMG3 Y_RNA.625-201ENST00000411256 107 ntBASIC1.76□□□□□ -2.13
SMKR1H3BMG3 AC016831.2-201ENST00000417179 352 ntBASIC1.76□□□□□ -2.13
SMKR1H3BMG3 AL389915.1-201ENST00000422463 466 ntBASIC1.76□□□□□ -2.13
SMKR1H3BMG3 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms