Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 POLHP1-201ENST00000411806 470 ntBASIC3.25□□□□□ -1.89
TCRBV7S3A2A0A539 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.25□□□□□ -1.89
TCRBV7S3A2A0A539 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.25□□□□□ -1.89
TCRBV7S3A2A0A539 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.25□□□□□ -1.89
TCRBV7S3A2A0A539 RPS23P3-201ENST00000470993 430 ntBASIC3.25□□□□□ -1.89
TCRBV7S3A2A0A539 AL135752.1-201ENST00000479477 471 ntBASIC3.25□□□□□ -1.89
TCRBV7S3A2A0A539 AC091951.2-201ENST00000500762 203 ntBASIC3.25□□□□□ -1.89
TCRBV7S3A2A0A539 AC008628.2-201ENST00000502605 298 ntBASIC3.25□□□□□ -1.89
TCRBV7S3A2A0A539 FAM206BP-201ENST00000510179 541 ntBASIC3.25□□□□□ -1.89
TCRBV7S3A2A0A539 RNU2-69P-201ENST00000516061 100 ntBASIC3.25□□□□□ -1.89
TCRBV7S3A2A0A539 RNU6-1314P-201ENST00000517139 104 ntBASIC3.25□□□□□ -1.89
TCRBV7S3A2A0A539 AC245166.1-201ENST00000521012 253 ntBASIC3.25□□□□□ -1.89
TCRBV7S3A2A0A539 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.25□□□□□ -1.89
TCRBV7S3A2A0A539 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.25□□□□□ -1.89
TCRBV7S3A2A0A539 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.25□□□□□ -1.89
TCRBV7S3A2A0A539 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.25□□□□□ -1.89
TCRBV7S3A2A0A539 MIR3186-201ENST00000577404 85 ntBASIC3.25□□□□□ -1.89
TCRBV7S3A2A0A539 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.25□□□□□ -1.89
TCRBV7S3A2A0A539 MIR3941-201ENST00000582572 103 ntBASIC3.25□□□□□ -1.89
TCRBV7S3A2A0A539 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.25□□□□□ -1.89
TCRBV7S3A2A0A539 AC104260.1-201ENST00000616660 539 ntBASIC3.25□□□□□ -1.89
TCRBV7S3A2A0A539 AC103705.1-201ENST00000619013 241 ntBASIC3.25□□□□□ -1.89
TCRBV7S3A2A0A539 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
TCRBV7S3A2A0A539 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.25□□□□□ -1.89
TCRBV7S3A2A0A539 AL136221.1-201ENST00000621449 509 ntBASIC3.25□□□□□ -1.89
TCRBV7S3A2A0A539 AL512643.1-201ENST00000635735 524 ntBASIC3.25□□□□□ -1.89
TCRBV7S3A2A0A539 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
TCRBV7S3A2A0A539 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.24□□□□□ -1.89
TCRBV7S3A2A0A539 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TCRBV7S3A2A0A539 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TCRBV7S3A2A0A539 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.24□□□□□ -1.89
TCRBV7S3A2A0A539 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.24□□□□□ -1.89
TCRBV7S3A2A0A539 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TCRBV7S3A2A0A539 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TCRBV7S3A2A0A539 RNU6-845P-201ENST00000362578 103 ntBASIC3.24□□□□□ -1.89
TCRBV7S3A2A0A539 Y_RNA.166-201ENST00000363730 102 ntBASIC3.24□□□□□ -1.89
TCRBV7S3A2A0A539 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
TCRBV7S3A2A0A539 RNU6-510P-201ENST00000391239 108 ntBASIC3.24□□□□□ -1.89
TCRBV7S3A2A0A539 AL591034.1-201ENST00000407447 340 ntBASIC3.24□□□□□ -1.89
TCRBV7S3A2A0A539 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TCRBV7S3A2A0A539 BX682237.1-201ENST00000415016 335 ntBASIC3.24□□□□□ -1.89
TCRBV7S3A2A0A539 RPL32P35-201ENST00000415214 394 ntBASIC3.24□□□□□ -1.89
TCRBV7S3A2A0A539 USP9YP8-201ENST00000441913 500 ntBASIC3.24□□□□□ -1.89
TCRBV7S3A2A0A539 RPS12P18-201ENST00000442381 270 ntBASIC3.24□□□□□ -1.89
TCRBV7S3A2A0A539 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
TCRBV7S3A2A0A539 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.24□□□□□ -1.89
TCRBV7S3A2A0A539 AL590639.1-201ENST00000456484 337 ntBASIC3.24□□□□□ -1.89
TCRBV7S3A2A0A539 RNU7-167P-201ENST00000459160 62 ntBASIC3.24□□□□□ -1.89
TCRBV7S3A2A0A539 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.24□□□□□ -1.89
TCRBV7S3A2A0A539 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.24□□□□□ -1.89
TCRBV7S3A2A0A539 RNU6-875P-201ENST00000516488 106 ntBASIC3.24□□□□□ -1.89
TCRBV7S3A2A0A539 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.24□□□□□ -1.89
TCRBV7S3A2A0A539 RPL7P20-201ENST00000520308 745 ntBASIC3.24□□□□□ -1.89
TCRBV7S3A2A0A539 HIGD1AP1-201ENST00000550979 275 ntBASIC3.24□□□□□ -1.89
TCRBV7S3A2A0A539 AC090115.3-201ENST00000553218 849 ntBASIC3.24□□□□□ -1.89
TCRBV7S3A2A0A539 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.24□□□□□ -1.89
TCRBV7S3A2A0A539 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.24□□□□□ -1.89
TCRBV7S3A2A0A539 AC106782.4-201ENST00000568264 210 ntBASIC3.24□□□□□ -1.89
TCRBV7S3A2A0A539 MIR5692A1-201ENST00000580523 69 ntBASIC3.24□□□□□ -1.89
TCRBV7S3A2A0A539 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.24□□□□□ -1.89
TCRBV7S3A2A0A539 AC021646.1-201ENST00000605469 484 ntBASIC3.24□□□□□ -1.89
TCRBV7S3A2A0A539 AL591516.1-201ENST00000611326 274 ntBASIC3.24□□□□□ -1.89
TCRBV7S3A2A0A539 uc_338.25-201ENST00000613756 156 ntBASIC3.24□□□□□ -1.89
TCRBV7S3A2A0A539 AL157817.1-201ENST00000614264 790 ntBASIC3.24□□□□□ -1.89
TCRBV7S3A2A0A539 AL355365.1-201ENST00000616480 294 ntBASIC3.24□□□□□ -1.89
TCRBV7S3A2A0A539 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.24□□□□□ -1.89
TCRBV7S3A2A0A539 AC092628.2-201ENST00000622492 339 ntBASIC3.24□□□□□ -1.89
TCRBV7S3A2A0A539 AC027309.3-201ENST00000623419 351 ntBASIC3.24□□□□□ -1.89
TCRBV7S3A2A0A539 AC022418.1-201ENST00000624118 445 ntBASIC3.24□□□□□ -1.89
TCRBV7S3A2A0A539 CUL1P1-201ENST00000509510 2425 ntBASIC3.24□□□□□ -1.89
TCRBV7S3A2A0A539 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TCRBV7S3A2A0A539 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.24□□□□□ -1.89
TCRBV7S3A2A0A539 MTND4P12-201ENST00000498999 1377 ntBASIC3.24□□□□□ -1.89
TCRBV7S3A2A0A539 AC093831.2-201ENST00000624393 3427 ntBASIC3.23□□□□□ -1.89
TCRBV7S3A2A0A539 RNA5SP50-201ENST00000363731 107 ntBASIC3.23□□□□□ -1.89
TCRBV7S3A2A0A539 RNU6-395P-201ENST00000365662 106 ntBASIC3.23□□□□□ -1.89
TCRBV7S3A2A0A539 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TCRBV7S3A2A0A539 RNU6-217P-201ENST00000384164 104 ntBASIC3.23□□□□□ -1.89
TCRBV7S3A2A0A539 RNU6-45P-201ENST00000384471 107 ntBASIC3.23□□□□□ -1.89
TCRBV7S3A2A0A539 Y_RNA.530-201ENST00000384587 101 ntBASIC3.23□□□□□ -1.89
TCRBV7S3A2A0A539 RPL21P3-201ENST00000395517 478 ntBASIC3.23□□□□□ -1.89
TCRBV7S3A2A0A539 RPL7P10-201ENST00000417407 739 ntBASIC3.23□□□□□ -1.89
TCRBV7S3A2A0A539 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.23□□□□□ -1.89
TCRBV7S3A2A0A539 AL360271.2-201ENST00000447710 161 ntBASIC3.23□□□□□ -1.89
TCRBV7S3A2A0A539 HMGN2P7-201ENST00000456186 273 ntBASIC3.23□□□□□ -1.89
TCRBV7S3A2A0A539 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.23□□□□□ -1.89
TCRBV7S3A2A0A539 AC146507.2-201ENST00000460608 476 ntBASIC3.23□□□□□ -1.89
TCRBV7S3A2A0A539 RN7SL75P-201ENST00000461926 281 ntBASIC3.23□□□□□ -1.89
TCRBV7S3A2A0A539 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.23□□□□□ -1.89
TCRBV7S3A2A0A539 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
TCRBV7S3A2A0A539 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.23□□□□□ -1.89
TCRBV7S3A2A0A539 AC114781.4-201ENST00000513707 639 ntBASIC3.23□□□□□ -1.89
TCRBV7S3A2A0A539 RNU6-1038P-201ENST00000516516 104 ntBASIC3.23□□□□□ -1.89
TCRBV7S3A2A0A539 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.23□□□□□ -1.89
TCRBV7S3A2A0A539 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.23□□□□□ -1.89
TCRBV7S3A2A0A539 AL157871.3-201ENST00000557231 293 ntBASIC3.23□□□□□ -1.89
TCRBV7S3A2A0A539 AC034105.4-201ENST00000568304 277 ntBASIC3.23□□□□□ -1.89
TCRBV7S3A2A0A539 MIR548AC-201ENST00000585049 88 ntBASIC3.23□□□□□ -1.89
TCRBV7S3A2A0A539 BNIP3P25-201ENST00000596023 559 ntBASIC3.23□□□□□ -1.89
TCRBV7S3A2A0A539 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms