Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 RPL7P46-201ENST00000425129 740 ntBASIC3.25□□□□□ -1.89
SNX9Q9Y5X1 RPL35AP12-201ENST00000425362 338 ntBASIC3.25□□□□□ -1.89
SNX9Q9Y5X1 BNIP3P2-201ENST00000441221 577 ntBASIC3.25□□□□□ -1.89
SNX9Q9Y5X1 DDX3P2-201ENST00000446138 111 ntBASIC3.25□□□□□ -1.89
SNX9Q9Y5X1 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SNX9Q9Y5X1 DPPA3P1-201ENST00000448050 469 ntBASIC3.25□□□□□ -1.89
SNX9Q9Y5X1 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.25□□□□□ -1.89
SNX9Q9Y5X1 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.25□□□□□ -1.89
SNX9Q9Y5X1 SNORD97-201ENST00000459187 142 ntBASIC3.25□□□□□ -1.89
SNX9Q9Y5X1 RPL31P58-201ENST00000469001 379 ntBASIC3.25□□□□□ -1.89
SNX9Q9Y5X1 RPL30P14-201ENST00000482744 348 ntBASIC3.25□□□□□ -1.89
SNX9Q9Y5X1 AC233702.1-201ENST00000482905 502 ntBASIC3.25□□□□□ -1.89
SNX9Q9Y5X1 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.25□□□□□ -1.89
SNX9Q9Y5X1 RNU6-1092P-201ENST00000516955 87 ntBASIC3.25□□□□□ -1.89
SNX9Q9Y5X1 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.25□□□□□ -1.89
SNX9Q9Y5X1 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.25□□□□□ -1.89
SNX9Q9Y5X1 AC118273.2-201ENST00000532092 465 ntBASIC3.25□□□□□ -1.89
SNX9Q9Y5X1 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.25□□□□□ -1.89
SNX9Q9Y5X1 AC022080.3-201ENST00000544433 482 ntBASIC3.25□□□□□ -1.89
SNX9Q9Y5X1 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.25□□□□□ -1.89
SNX9Q9Y5X1 AC005951.2-201ENST00000576282 495 ntBASIC3.25□□□□□ -1.89
SNX9Q9Y5X1 AF038458.1-201ENST00000588406 262 ntBASIC3.25□□□□□ -1.89
SNX9Q9Y5X1 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.25□□□□□ -1.89
SNX9Q9Y5X1 AC078899.3-201ENST00000599065 212 ntBASIC3.25□□□□□ -1.89
SNX9Q9Y5X1 AL162413.1-201ENST00000603198 110 ntBASIC3.25□□□□□ -1.89
SNX9Q9Y5X1 AL035413.2-201ENST00000604801 525 ntBASIC3.25□□□□□ -1.89
SNX9Q9Y5X1 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.25□□□□□ -1.89
SNX9Q9Y5X1 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.25□□□□□ -1.89
SNX9Q9Y5X1 AP003122.6-201ENST00000623831 495 ntBASIC3.25□□□□□ -1.89
SNX9Q9Y5X1 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
SNX9Q9Y5X1 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SNX9Q9Y5X1 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.25□□□□□ -1.89
SNX9Q9Y5X1 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SNX9Q9Y5X1 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
SNX9Q9Y5X1 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SNX9Q9Y5X1 CKAP2P1-201ENST00000555477 2049 ntBASIC3.24□□□□□ -1.89
SNX9Q9Y5X1 MTND5P17-201ENST00000418405 1603 ntBASIC3.24□□□□□ -1.89
SNX9Q9Y5X1 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SNX9Q9Y5X1 AC073325.2-201ENST00000339545 159 ntBASIC3.24□□□□□ -1.89
SNX9Q9Y5X1 RNU6-451P-201ENST00000362921 107 ntBASIC3.24□□□□□ -1.89
SNX9Q9Y5X1 RNY3P3-201ENST00000363816 102 ntBASIC3.24□□□□□ -1.89
SNX9Q9Y5X1 SMIM11P1-201ENST00000369586 178 ntBASIC3.24□□□□□ -1.89
SNX9Q9Y5X1 RNU6-14P-201ENST00000384630 106 ntBASIC3.24□□□□□ -1.89
SNX9Q9Y5X1 Y_RNA.573-201ENST00000384763 105 ntBASIC3.24□□□□□ -1.89
SNX9Q9Y5X1 AL109913.1-201ENST00000421173 514 ntBASIC3.24□□□□□ -1.89
SNX9Q9Y5X1 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.24□□□□□ -1.89
SNX9Q9Y5X1 USP12PX-201ENST00000432383 1057 ntBASIC3.24□□□□□ -1.89
SNX9Q9Y5X1 MTCO3P18-201ENST00000440206 761 ntBASIC3.24□□□□□ -1.89
SNX9Q9Y5X1 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.24□□□□□ -1.89
SNX9Q9Y5X1 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.24□□□□□ -1.89
SNX9Q9Y5X1 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.24□□□□□ -1.89
SNX9Q9Y5X1 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.24□□□□□ -1.89
SNX9Q9Y5X1 RNU6-261P-201ENST00000459506 102 ntBASIC3.24□□□□□ -1.89
SNX9Q9Y5X1 MRPS17P3-201ENST00000465453 385 ntBASIC3.24□□□□□ -1.89
SNX9Q9Y5X1 RN7SL20P-201ENST00000488827 297 ntBASIC3.24□□□□□ -1.89
SNX9Q9Y5X1 AC116562.3-201ENST00000506136 177 ntBASIC3.24□□□□□ -1.89
SNX9Q9Y5X1 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.24□□□□□ -1.89
SNX9Q9Y5X1 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.24□□□□□ -1.89
SNX9Q9Y5X1 RNU6-358P-201ENST00000516564 75 ntBASIC3.24□□□□□ -1.89
SNX9Q9Y5X1 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.24□□□□□ -1.89
SNX9Q9Y5X1 AC245166.1-201ENST00000521012 253 ntBASIC3.24□□□□□ -1.89
SNX9Q9Y5X1 AC068587.5-201ENST00000528506 175 ntBASIC3.24□□□□□ -1.89
SNX9Q9Y5X1 AP005435.4-201ENST00000529514 284 ntBASIC3.24□□□□□ -1.89
SNX9Q9Y5X1 OR5B19P-201ENST00000531766 928 ntBASIC3.24□□□□□ -1.89
SNX9Q9Y5X1 AC007536.1-201ENST00000533382 349 ntBASIC3.24□□□□□ -1.89
SNX9Q9Y5X1 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.24□□□□□ -1.89
SNX9Q9Y5X1 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.24□□□□□ -1.89
SNX9Q9Y5X1 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.24□□□□□ -1.89
SNX9Q9Y5X1 H3F3AP1-201ENST00000559984 334 ntBASIC3.24□□□□□ -1.89
SNX9Q9Y5X1 MTCO3P24-201ENST00000572729 782 ntBASIC3.24□□□□□ -1.89
SNX9Q9Y5X1 BNIP3P30-201ENST00000601184 574 ntBASIC3.24□□□□□ -1.89
SNX9Q9Y5X1 AP001486.3-201ENST00000615334 372 ntBASIC3.24□□□□□ -1.89
SNX9Q9Y5X1 AL138880.2-201ENST00000616214 239 ntBASIC3.24□□□□□ -1.89
SNX9Q9Y5X1 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
SNX9Q9Y5X1 YWHAEP7-203ENST00000622054 312 ntBASIC3.24□□□□□ -1.89
SNX9Q9Y5X1 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SNX9Q9Y5X1 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
SNX9Q9Y5X1 AL139276.1-201ENST00000311910 1001 ntBASIC3.23□□□□□ -1.89
SNX9Q9Y5X1 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
SNX9Q9Y5X1 AC073343.1-201ENST00000328239 651 ntBASIC3.23□□□□□ -1.89
SNX9Q9Y5X1 RNU6-525P-201ENST00000363685 104 ntBASIC3.23□□□□□ -1.89
SNX9Q9Y5X1 RNU1-140P-201ENST00000365040 165 ntBASIC3.23□□□□□ -1.89
SNX9Q9Y5X1 SNORA24.1-201ENST00000384401 135 ntBASIC3.23□□□□□ -1.89
SNX9Q9Y5X1 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SNX9Q9Y5X1 TXNP7-201ENST00000406296 293 ntBASIC3.23□□□□□ -1.89
SNX9Q9Y5X1 AC138393.2-201ENST00000414742 246 ntBASIC3.23□□□□□ -1.89
SNX9Q9Y5X1 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.23□□□□□ -1.89
SNX9Q9Y5X1 TMEM167AP1-201ENST00000423409 219 ntBASIC3.23□□□□□ -1.89
SNX9Q9Y5X1 RPL27AP8-201ENST00000424277 446 ntBASIC3.23□□□□□ -1.89
SNX9Q9Y5X1 AC022018.1-201ENST00000430685 241 ntBASIC3.23□□□□□ -1.89
SNX9Q9Y5X1 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.23□□□□□ -1.89
SNX9Q9Y5X1 RPL36AP6-201ENST00000435770 321 ntBASIC3.23□□□□□ -1.89
SNX9Q9Y5X1 AL121871.1-201ENST00000443413 436 ntBASIC3.23□□□□□ -1.89
SNX9Q9Y5X1 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.23□□□□□ -1.89
SNX9Q9Y5X1 AC073415.1-201ENST00000449240 153 ntBASIC3.23□□□□□ -1.89
SNX9Q9Y5X1 GMFBP1-201ENST00000467831 427 ntBASIC3.23□□□□□ -1.89
SNX9Q9Y5X1 AC117440.1-201ENST00000474107 571 ntBASIC3.23□□□□□ -1.89
SNX9Q9Y5X1 NRON-201ENST00000517270 370 ntBASIC3.23□□□□□ -1.89
SNX9Q9Y5X1 AP006587.4-201ENST00000526053 529 ntBASIC3.23□□□□□ -1.89
SNX9Q9Y5X1 AC093012.1-202ENST00000549403 582 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms