Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AC010620.1-201ENST00000601088 1102 ntBASIC2.79□□□□□ -1.96
PCDHGA1Q9Y5H4 AC104763.2-201ENST00000604179 382 ntBASIC2.79□□□□□ -1.96
PCDHGA1Q9Y5H4 AC135507.1-201ENST00000607214 561 ntBASIC2.79□□□□□ -1.96
PCDHGA1Q9Y5H4 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.79□□□□□ -1.96
PCDHGA1Q9Y5H4 AC008250.2-201ENST00000615261 205 ntBASIC2.79□□□□□ -1.96
PCDHGA1Q9Y5H4 AL158063.1-201ENST00000615349 536 ntBASIC2.79□□□□□ -1.96
PCDHGA1Q9Y5H4 AP001506.1-201ENST00000615444 211 ntBASIC2.79□□□□□ -1.96
PCDHGA1Q9Y5H4 U2.21-201ENST00000637295 81 ntBASIC2.79□□□□□ -1.96
PCDHGA1Q9Y5H4 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
PCDHGA1Q9Y5H4 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
PCDHGA1Q9Y5H4 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.79□□□□□ -1.96
PCDHGA1Q9Y5H4 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PCDHGA1Q9Y5H4 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.79□□□□□ -1.96
PCDHGA1Q9Y5H4 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
PCDHGA1Q9Y5H4 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
PCDHGA1Q9Y5H4 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
PCDHGA1Q9Y5H4 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.78□□□□□ -1.96
PCDHGA1Q9Y5H4 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
PCDHGA1Q9Y5H4 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
PCDHGA1Q9Y5H4 AC135776.4-201ENST00000624300 1904 ntBASIC2.78□□□□□ -1.96
PCDHGA1Q9Y5H4 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.78□□□□□ -1.96
PCDHGA1Q9Y5H4 HSPE1P11-201ENST00000339579 310 ntBASIC2.78□□□□□ -1.96
PCDHGA1Q9Y5H4 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
PCDHGA1Q9Y5H4 RNU6-859P-201ENST00000362728 107 ntBASIC2.78□□□□□ -1.96
PCDHGA1Q9Y5H4 SNORD56.2-201ENST00000363242 71 ntBASIC2.78□□□□□ -1.96
PCDHGA1Q9Y5H4 RNU6-778P-201ENST00000363269 103 ntBASIC2.78□□□□□ -1.96
PCDHGA1Q9Y5H4 U8.3-201ENST00000363321 132 ntBASIC2.78□□□□□ -1.96
PCDHGA1Q9Y5H4 U3.6-201ENST00000363622 211 ntBASIC2.78□□□□□ -1.96
PCDHGA1Q9Y5H4 SNORA51.4-201ENST00000364993 124 ntBASIC2.78□□□□□ -1.96
PCDHGA1Q9Y5H4 SMIM11P1-201ENST00000369586 178 ntBASIC2.78□□□□□ -1.96
PCDHGA1Q9Y5H4 RNU6-297P-201ENST00000384636 107 ntBASIC2.78□□□□□ -1.96
PCDHGA1Q9Y5H4 RNA5SP274-201ENST00000410484 108 ntBASIC2.78□□□□□ -1.96
PCDHGA1Q9Y5H4 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.78□□□□□ -1.96
PCDHGA1Q9Y5H4 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.78□□□□□ -1.96
PCDHGA1Q9Y5H4 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC2.78□□□□□ -1.96
PCDHGA1Q9Y5H4 RPL36AP53-201ENST00000432891 316 ntBASIC2.78□□□□□ -1.96
PCDHGA1Q9Y5H4 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.78□□□□□ -1.96
PCDHGA1Q9Y5H4 RPS15AP7-201ENST00000439294 405 ntBASIC2.78□□□□□ -1.96
PCDHGA1Q9Y5H4 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.78□□□□□ -1.96
PCDHGA1Q9Y5H4 NEFMP1-201ENST00000443423 1006 ntBASIC2.78□□□□□ -1.96
PCDHGA1Q9Y5H4 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.78□□□□□ -1.96
PCDHGA1Q9Y5H4 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.78□□□□□ -1.96
PCDHGA1Q9Y5H4 RPL39P36-201ENST00000490784 156 ntBASIC2.78□□□□□ -1.96
PCDHGA1Q9Y5H4 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.78□□□□□ -1.96
PCDHGA1Q9Y5H4 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.78□□□□□ -1.96
PCDHGA1Q9Y5H4 AC091965.2-201ENST00000512324 613 ntBASIC2.78□□□□□ -1.96
PCDHGA1Q9Y5H4 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.78□□□□□ -1.96
PCDHGA1Q9Y5H4 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.78□□□□□ -1.96
PCDHGA1Q9Y5H4 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.78□□□□□ -1.96
PCDHGA1Q9Y5H4 MIR3682-201ENST00000581338 84 ntBASIC2.78□□□□□ -1.96
PCDHGA1Q9Y5H4 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.78□□□□□ -1.96
PCDHGA1Q9Y5H4 OR1M4P-201ENST00000589199 287 ntBASIC2.78□□□□□ -1.96
PCDHGA1Q9Y5H4 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.78□□□□□ -1.96
PCDHGA1Q9Y5H4 AL358072.1-201ENST00000604156 575 ntBASIC2.78□□□□□ -1.96
PCDHGA1Q9Y5H4 AC007363.1-201ENST00000604736 620 ntBASIC2.78□□□□□ -1.96
PCDHGA1Q9Y5H4 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.78□□□□□ -1.96
PCDHGA1Q9Y5H4 AC011939.3-201ENST00000613686 466 ntBASIC2.78□□□□□ -1.96
PCDHGA1Q9Y5H4 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
PCDHGA1Q9Y5H4 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.78□□□□□ -1.96
PCDHGA1Q9Y5H4 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.78□□□□□ -1.96
PCDHGA1Q9Y5H4 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
PCDHGA1Q9Y5H4 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
PCDHGA1Q9Y5H4 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.77□□□□□ -1.97
PCDHGA1Q9Y5H4 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.77□□□□□ -1.97
PCDHGA1Q9Y5H4 RNU6-1083P-201ENST00000384022 107 ntBASIC2.77□□□□□ -1.97
PCDHGA1Q9Y5H4 MIR1302-8-201ENST00000408342 128 ntBASIC2.77□□□□□ -1.97
PCDHGA1Q9Y5H4 RNA5SP344-201ENST00000411081 104 ntBASIC2.77□□□□□ -1.97
PCDHGA1Q9Y5H4 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.77□□□□□ -1.97
PCDHGA1Q9Y5H4 AC007283.2-201ENST00000424739 197 ntBASIC2.77□□□□□ -1.97
PCDHGA1Q9Y5H4 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.77□□□□□ -1.97
PCDHGA1Q9Y5H4 OR2AS1P-201ENST00000427827 319 ntBASIC2.77□□□□□ -1.97
PCDHGA1Q9Y5H4 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.77□□□□□ -1.97
PCDHGA1Q9Y5H4 AC009961.2-201ENST00000435771 251 ntBASIC2.77□□□□□ -1.97
PCDHGA1Q9Y5H4 AL022238.1-201ENST00000442557 355 ntBASIC2.77□□□□□ -1.97
PCDHGA1Q9Y5H4 AL513328.1-201ENST00000446460 224 ntBASIC2.77□□□□□ -1.97
PCDHGA1Q9Y5H4 GAPDHP17-201ENST00000449858 1001 ntBASIC2.77□□□□□ -1.97
PCDHGA1Q9Y5H4 NIPA2P5-201ENST00000452282 464 ntBASIC2.77□□□□□ -1.97
PCDHGA1Q9Y5H4 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.77□□□□□ -1.97
PCDHGA1Q9Y5H4 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.77□□□□□ -1.97
PCDHGA1Q9Y5H4 RN7SL499P-201ENST00000481141 276 ntBASIC2.77□□□□□ -1.97
PCDHGA1Q9Y5H4 RPS15AP34-201ENST00000487776 387 ntBASIC2.77□□□□□ -1.97
PCDHGA1Q9Y5H4 RN7SL20P-201ENST00000488827 297 ntBASIC2.77□□□□□ -1.97
PCDHGA1Q9Y5H4 RPS27AP10-201ENST00000496103 208 ntBASIC2.77□□□□□ -1.97
PCDHGA1Q9Y5H4 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.77□□□□□ -1.97
PCDHGA1Q9Y5H4 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.77□□□□□ -1.97
PCDHGA1Q9Y5H4 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.77□□□□□ -1.97
PCDHGA1Q9Y5H4 RNU4-29P-201ENST00000515943 174 ntBASIC2.77□□□□□ -1.97
PCDHGA1Q9Y5H4 RNU7-51P-201ENST00000516560 62 ntBASIC2.77□□□□□ -1.97
PCDHGA1Q9Y5H4 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.77□□□□□ -1.97
PCDHGA1Q9Y5H4 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.77□□□□□ -1.97
PCDHGA1Q9Y5H4 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.77□□□□□ -1.97
PCDHGA1Q9Y5H4 AL356057.1-201ENST00000533798 831 ntBASIC2.77□□□□□ -1.97
PCDHGA1Q9Y5H4 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
PCDHGA1Q9Y5H4 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.77□□□□□ -1.97
PCDHGA1Q9Y5H4 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.77□□□□□ -1.97
PCDHGA1Q9Y5H4 AC015871.2-201ENST00000603605 948 ntBASIC2.77□□□□□ -1.97
PCDHGA1Q9Y5H4 BNIP3P9-201ENST00000603714 553 ntBASIC2.77□□□□□ -1.97
PCDHGA1Q9Y5H4 AP002360.4-201ENST00000606980 481 ntBASIC2.77□□□□□ -1.97
PCDHGA1Q9Y5H4 AL365204.3-201ENST00000612448 685 ntBASIC2.77□□□□□ -1.97
PCDHGA1Q9Y5H4 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms