Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 RNU6-1167P-201ENST00000363227 94 ntBASIC5.57□□□□□ -1.52
ZC3H4Q9UPT8 U3.6-201ENST00000363622 211 ntBASIC5.57□□□□□ -1.52
ZC3H4Q9UPT8 RNU1-132P-201ENST00000364300 164 ntBASIC5.57□□□□□ -1.52
ZC3H4Q9UPT8 RNA5SP513-201ENST00000364648 118 ntBASIC5.57□□□□□ -1.52
ZC3H4Q9UPT8 RNU6-384P-201ENST00000364900 104 ntBASIC5.57□□□□□ -1.52
ZC3H4Q9UPT8 Y_RNA.405-201ENST00000383979 100 ntBASIC5.57□□□□□ -1.52
ZC3H4Q9UPT8 Y_RNA.451-201ENST00000384200 100 ntBASIC5.57□□□□□ -1.52
ZC3H4Q9UPT8 Y_RNA.524-201ENST00000384564 100 ntBASIC5.57□□□□□ -1.52
ZC3H4Q9UPT8 Y_RNA.561-201ENST00000384694 100 ntBASIC5.57□□□□□ -1.52
ZC3H4Q9UPT8 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
ZC3H4Q9UPT8 RPS29P13-201ENST00000402041 169 ntBASIC5.57□□□□□ -1.52
ZC3H4Q9UPT8 MORN2-203ENST00000409131 544 ntTSL 5 BASIC5.57□□□□□ -1.52
ZC3H4Q9UPT8 TMEM167AP1-201ENST00000423409 219 ntBASIC5.57□□□□□ -1.52
ZC3H4Q9UPT8 AL117339.2-201ENST00000430475 180 ntBASIC5.57□□□□□ -1.52
ZC3H4Q9UPT8 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.57□□□□□ -1.52
ZC3H4Q9UPT8 AL353748.1-201ENST00000440753 474 ntBASIC5.57□□□□□ -1.52
ZC3H4Q9UPT8 HSPE1P6-201ENST00000479457 291 ntBASIC5.57□□□□□ -1.52
ZC3H4Q9UPT8 Y_RNA.706-201ENST00000516933 99 ntBASIC5.57□□□□□ -1.52
ZC3H4Q9UPT8 CASP1P1-201ENST00000526345 212 ntBASIC5.57□□□□□ -1.52
ZC3H4Q9UPT8 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC5.57□□□□□ -1.52
ZC3H4Q9UPT8 SNORD84-203ENST00000584275 78 ntBASIC5.57□□□□□ -1.52
ZC3H4Q9UPT8 RPL7P50-201ENST00000600588 727 ntBASIC5.57□□□□□ -1.52
ZC3H4Q9UPT8 AL713866.2-201ENST00000603579 219 ntBASIC5.57□□□□□ -1.52
ZC3H4Q9UPT8 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC5.57□□□□□ -1.52
ZC3H4Q9UPT8 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ZC3H4Q9UPT8 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ZC3H4Q9UPT8 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
ZC3H4Q9UPT8 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC5.57□□□□□ -1.52
ZC3H4Q9UPT8 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.57□□□□□ -1.52
ZC3H4Q9UPT8 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
ZC3H4Q9UPT8 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.57□□□□□ -1.52
ZC3H4Q9UPT8 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
ZC3H4Q9UPT8 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.56□□□□□ -1.52
ZC3H4Q9UPT8 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ZC3H4Q9UPT8 AL391684.1-202ENST00000641293 1636 ntBASIC5.56□□□□□ -1.52
ZC3H4Q9UPT8 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.56□□□□□ -1.52
ZC3H4Q9UPT8 OR4G2P-202ENST00000641004 1759 ntBASIC5.56□□□□□ -1.52
ZC3H4Q9UPT8 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
ZC3H4Q9UPT8 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
ZC3H4Q9UPT8 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ZC3H4Q9UPT8 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ZC3H4Q9UPT8 MIR412-201ENST00000362142 91 ntBASIC5.56□□□□□ -1.52
ZC3H4Q9UPT8 5S_rRNA.1-201ENST00000364415 116 ntBASIC5.56□□□□□ -1.52
ZC3H4Q9UPT8 MTCYBP2-201ENST00000407745 171 ntBASIC5.56□□□□□ -1.52
ZC3H4Q9UPT8 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.56□□□□□ -1.52
ZC3H4Q9UPT8 AL356095.1-201ENST00000417217 199 ntBASIC5.56□□□□□ -1.52
ZC3H4Q9UPT8 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC5.56□□□□□ -1.52
ZC3H4Q9UPT8 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.56□□□□□ -1.52
ZC3H4Q9UPT8 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC5.56□□□□□ -1.52
ZC3H4Q9UPT8 NDUFS5P3-201ENST00000450668 321 ntBASIC5.56□□□□□ -1.52
ZC3H4Q9UPT8 AL136097.1-201ENST00000456945 913 ntBASIC5.56□□□□□ -1.52
ZC3H4Q9UPT8 RPL23AP45-201ENST00000476406 468 ntBASIC5.56□□□□□ -1.52
ZC3H4Q9UPT8 AC107393.1-201ENST00000512403 346 ntBASIC5.56□□□□□ -1.52
ZC3H4Q9UPT8 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC5.56□□□□□ -1.52
ZC3H4Q9UPT8 IGHVII-62-1-201ENST00000519283 235 ntBASIC5.56□□□□□ -1.52
ZC3H4Q9UPT8 UTP23-205ENST00000520733 369 ntTSL 3 BASIC5.56□□□□□ -1.52
ZC3H4Q9UPT8 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC5.56□□□□□ -1.52
ZC3H4Q9UPT8 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC5.56□□□□□ -1.52
ZC3H4Q9UPT8 RN7SL435P-201ENST00000584418 282 ntBASIC5.56□□□□□ -1.52
ZC3H4Q9UPT8 AC008121.1-201ENST00000603244 268 ntBASIC5.56□□□□□ -1.52
ZC3H4Q9UPT8 AL161756.2-201ENST00000604597 246 ntBASIC5.56□□□□□ -1.52
ZC3H4Q9UPT8 AC112484.5-201ENST00000624189 228 ntBASIC5.56□□□□□ -1.52
ZC3H4Q9UPT8 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.56□□□□□ -1.52
ZC3H4Q9UPT8 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.56□□□□□ -1.52
ZC3H4Q9UPT8 AC000123.3-201ENST00000624029 4975 ntBASIC5.56□□□□□ -1.52
ZC3H4Q9UPT8 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.56□□□□□ -1.52
ZC3H4Q9UPT8 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC5.56□□□□□ -1.52
ZC3H4Q9UPT8 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
ZC3H4Q9UPT8 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
ZC3H4Q9UPT8 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.55□□□□□ -1.52
ZC3H4Q9UPT8 Y_RNA.291-201ENST00000364886 113 ntBASIC5.55□□□□□ -1.52
ZC3H4Q9UPT8 Y_RNA.506-201ENST00000384494 102 ntBASIC5.55□□□□□ -1.52
ZC3H4Q9UPT8 RNU6-125P-201ENST00000384505 107 ntBASIC5.55□□□□□ -1.52
ZC3H4Q9UPT8 SNORA12.2-201ENST00000391040 156 ntBASIC5.55□□□□□ -1.52
ZC3H4Q9UPT8 AL592148.1-201ENST00000413568 445 ntBASIC5.55□□□□□ -1.52
ZC3H4Q9UPT8 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC5.55□□□□□ -1.52
ZC3H4Q9UPT8 AC087588.1-201ENST00000462203 316 ntBASIC5.55□□□□□ -1.52
ZC3H4Q9UPT8 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
ZC3H4Q9UPT8 AC093591.2-201ENST00000565254 3843 ntBASIC5.55□□□□□ -1.52
ZC3H4Q9UPT8 AC022968.1-201ENST00000567372 442 ntBASIC5.55□□□□□ -1.52
ZC3H4Q9UPT8 AL161629.2-201ENST00000615347 275 ntBASIC5.55□□□□□ -1.52
ZC3H4Q9UPT8 U2.14-201ENST00000615943 113 ntBASIC5.55□□□□□ -1.52
ZC3H4Q9UPT8 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.55□□□□□ -1.52
ZC3H4Q9UPT8 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
ZC3H4Q9UPT8 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
ZC3H4Q9UPT8 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.55□□□□□ -1.52
ZC3H4Q9UPT8 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.55□□□□□ -1.52
ZC3H4Q9UPT8 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC5.55□□□□□ -1.52
ZC3H4Q9UPT8 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
ZC3H4Q9UPT8 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.55□□□□□ -1.52
ZC3H4Q9UPT8 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
ZC3H4Q9UPT8 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.55□□□□□ -1.52
ZC3H4Q9UPT8 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
ZC3H4Q9UPT8 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
ZC3H4Q9UPT8 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
ZC3H4Q9UPT8 MIR411-201ENST00000362239 96 ntBASIC5.54□□□□□ -1.52
ZC3H4Q9UPT8 SNORD113-8-201ENST00000363497 74 ntBASIC5.54□□□□□ -1.52
ZC3H4Q9UPT8 RNA5SP167-201ENST00000365461 116 ntBASIC5.54□□□□□ -1.52
ZC3H4Q9UPT8 MIR483-201ENST00000385070 76 ntBASIC5.54□□□□□ -1.52
ZC3H4Q9UPT8 Y_RNA.581-201ENST00000391017 97 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 155.6 ms