Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SALL4Q9UJQ4 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SALL4Q9UJQ4 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.75□□□□□ -1.65
SALL4Q9UJQ4 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.75□□□□□ -1.65
SALL4Q9UJQ4 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.75□□□□□ -1.65
SALL4Q9UJQ4 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SALL4Q9UJQ4 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.74□□□□□ -1.65
SALL4Q9UJQ4 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SALL4Q9UJQ4 Y_RNA.54-201ENST00000362766 105 ntBASIC4.74□□□□□ -1.65
SALL4Q9UJQ4 Y_RNA.65-201ENST00000362846 100 ntBASIC4.74□□□□□ -1.65
SALL4Q9UJQ4 Y_RNA.358-201ENST00000365491 99 ntBASIC4.74□□□□□ -1.65
SALL4Q9UJQ4 Y_RNA.462-201ENST00000384268 102 ntBASIC4.74□□□□□ -1.65
SALL4Q9UJQ4 MIR215-201ENST00000384858 110 ntBASIC4.74□□□□□ -1.65
SALL4Q9UJQ4 MIR34A-201ENST00000385130 110 ntBASIC4.74□□□□□ -1.65
SALL4Q9UJQ4 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SALL4Q9UJQ4 MIR1290-201ENST00000408735 78 ntBASIC4.74□□□□□ -1.65
SALL4Q9UJQ4 RNU2-33P-201ENST00000410344 192 ntBASIC4.74□□□□□ -1.65
SALL4Q9UJQ4 RN7SKP106-201ENST00000410832 272 ntBASIC4.74□□□□□ -1.65
SALL4Q9UJQ4 SNORA74C-2-201ENST00000411179 201 ntBASIC4.74□□□□□ -1.65
SALL4Q9UJQ4 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.74□□□□□ -1.65
SALL4Q9UJQ4 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.74□□□□□ -1.65
SALL4Q9UJQ4 AC091286.1-201ENST00000431233 461 ntBASIC4.74□□□□□ -1.65
SALL4Q9UJQ4 AC091390.1-201ENST00000433904 331 ntBASIC4.74□□□□□ -1.65
SALL4Q9UJQ4 HLA-N-201ENST00000437516 135 ntBASIC4.74□□□□□ -1.65
SALL4Q9UJQ4 AC016831.4-201ENST00000438302 307 ntBASIC4.74□□□□□ -1.65
SALL4Q9UJQ4 RPL23AP93-201ENST00000440847 484 ntBASIC4.74□□□□□ -1.65
SALL4Q9UJQ4 TPT1P12-201ENST00000448968 492 ntBASIC4.74□□□□□ -1.65
SALL4Q9UJQ4 RNU7-87P-201ENST00000459343 62 ntBASIC4.74□□□□□ -1.65
SALL4Q9UJQ4 AC025755.1-201ENST00000521306 278 ntBASIC4.74□□□□□ -1.65
SALL4Q9UJQ4 DEFB108E-201ENST00000524692 240 ntBASIC4.74□□□□□ -1.65
SALL4Q9UJQ4 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.74□□□□□ -1.65
SALL4Q9UJQ4 AC130289.1-201ENST00000577321 73 ntBASIC4.74□□□□□ -1.65
SALL4Q9UJQ4 SRGNP1-201ENST00000603392 451 ntBASIC4.74□□□□□ -1.65
SALL4Q9UJQ4 MIR376A1-201ENST00000616574 68 ntBASIC4.74□□□□□ -1.65
SALL4Q9UJQ4 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.74□□□□□ -1.65
SALL4Q9UJQ4 AC007546.2-201ENST00000623996 360 ntBASIC4.74□□□□□ -1.65
SALL4Q9UJQ4 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC4.74□□□□□ -1.65
SALL4Q9UJQ4 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SALL4Q9UJQ4 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
SALL4Q9UJQ4 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SALL4Q9UJQ4 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
SALL4Q9UJQ4 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
SALL4Q9UJQ4 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
SALL4Q9UJQ4 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.74□□□□□ -1.65
SALL4Q9UJQ4 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SALL4Q9UJQ4 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
SALL4Q9UJQ4 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.73□□□□□ -1.65
SALL4Q9UJQ4 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SALL4Q9UJQ4 AL022322.2-201ENST00000624072 20397 ntBASIC4.73□□□□□ -1.65
SALL4Q9UJQ4 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.73□□□□□ -1.65
SALL4Q9UJQ4 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.73□□□□□ -1.65
SALL4Q9UJQ4 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.73□□□□□ -1.65
SALL4Q9UJQ4 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SALL4Q9UJQ4 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.73□□□□□ -1.65
SALL4Q9UJQ4 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
SALL4Q9UJQ4 U3.6-201ENST00000363622 211 ntBASIC4.73□□□□□ -1.65
SALL4Q9UJQ4 Y_RNA.180-201ENST00000363867 113 ntBASIC4.73□□□□□ -1.65
SALL4Q9UJQ4 Y_RNA.270-201ENST00000364693 104 ntBASIC4.73□□□□□ -1.65
SALL4Q9UJQ4 SNORD115-46-201ENST00000390982 71 ntBASIC4.73□□□□□ -1.65
SALL4Q9UJQ4 SNORA12.2-201ENST00000391040 156 ntBASIC4.73□□□□□ -1.65
SALL4Q9UJQ4 RNA5SP332-201ENST00000391063 115 ntBASIC4.73□□□□□ -1.65
SALL4Q9UJQ4 AP000275.1-201ENST00000411943 390 ntBASIC4.73□□□□□ -1.65
SALL4Q9UJQ4 AC244098.2-201ENST00000422068 99 ntBASIC4.73□□□□□ -1.65
SALL4Q9UJQ4 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.73□□□□□ -1.65
SALL4Q9UJQ4 RN7SL385P-201ENST00000468873 276 ntBASIC4.73□□□□□ -1.65
SALL4Q9UJQ4 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.73□□□□□ -1.65
SALL4Q9UJQ4 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.73□□□□□ -1.65
SALL4Q9UJQ4 RNU7-175P-201ENST00000515915 61 ntBASIC4.73□□□□□ -1.65
SALL4Q9UJQ4 RNU6-377P-201ENST00000515965 102 ntBASIC4.73□□□□□ -1.65
SALL4Q9UJQ4 RNU4-71P-201ENST00000516258 113 ntBASIC4.73□□□□□ -1.65
SALL4Q9UJQ4 RNA5SP290-201ENST00000517133 127 ntBASIC4.73□□□□□ -1.65
SALL4Q9UJQ4 MIR2355-201ENST00000517199 87 ntBASIC4.73□□□□□ -1.65
SALL4Q9UJQ4 AC022868.1-201ENST00000517767 391 ntBASIC4.73□□□□□ -1.65
SALL4Q9UJQ4 AP004371.1-201ENST00000525240 214 ntBASIC4.73□□□□□ -1.65
SALL4Q9UJQ4 AC007458.1-201ENST00000542812 373 ntBASIC4.73□□□□□ -1.65
SALL4Q9UJQ4 HMGB1P14-201ENST00000557424 591 ntBASIC4.73□□□□□ -1.65
SALL4Q9UJQ4 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.73□□□□□ -1.65
SALL4Q9UJQ4 BX284668.6-201ENST00000606899 438 ntBASIC4.73□□□□□ -1.65
SALL4Q9UJQ4 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC4.73□□□□□ -1.65
SALL4Q9UJQ4 FTX_2.1-201ENST00000618816 94 ntBASIC4.73□□□□□ -1.65
SALL4Q9UJQ4 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.73□□□□□ -1.65
SALL4Q9UJQ4 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
SALL4Q9UJQ4 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
SALL4Q9UJQ4 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
SALL4Q9UJQ4 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.73□□□□□ -1.65
SALL4Q9UJQ4 AC139713.2-215ENST00000641428 5037 ntBASIC4.73□□□□□ -1.65
SALL4Q9UJQ4 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SALL4Q9UJQ4 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
SALL4Q9UJQ4 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
SALL4Q9UJQ4 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
SALL4Q9UJQ4 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SALL4Q9UJQ4 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
SALL4Q9UJQ4 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.72□□□□□ -1.65
SALL4Q9UJQ4 ZNF137P-201ENST00000456718 1920 ntBASIC4.72□□□□□ -1.65
SALL4Q9UJQ4 AC025031.4-201ENST00000621248 3271 ntBASIC4.72□□□□□ -1.65
SALL4Q9UJQ4 AC016588.2-201ENST00000632484 3021 ntBASIC4.72□□□□□ -1.65
SALL4Q9UJQ4 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
SALL4Q9UJQ4 RNU1-15P-201ENST00000353977 144 ntBASIC4.72□□□□□ -1.65
SALL4Q9UJQ4 RNU6-227P-201ENST00000362865 103 ntBASIC4.72□□□□□ -1.65
SALL4Q9UJQ4 SNORD81.1-201ENST00000363064 77 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms