Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC5.04□□□□□ -1.6
ATG3Q9NT62 SETP7-201ENST00000552169 453 ntBASIC5.04□□□□□ -1.6
ATG3Q9NT62 AL133153.1-201ENST00000557756 303 ntBASIC5.04□□□□□ -1.6
ATG3Q9NT62 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC5.04□□□□□ -1.6
ATG3Q9NT62 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC5.04□□□□□ -1.6
ATG3Q9NT62 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC5.04□□□□□ -1.6
ATG3Q9NT62 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATG3Q9NT62 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATG3Q9NT62 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
ATG3Q9NT62 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATG3Q9NT62 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATG3Q9NT62 MTND5P6-201ENST00000422338 1798 ntBASIC5.04□□□□□ -1.6
ATG3Q9NT62 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.03□□□□□ -1.6
ATG3Q9NT62 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ATG3Q9NT62 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
ATG3Q9NT62 Y_RNA.462-201ENST00000384268 102 ntBASIC5.03□□□□□ -1.6
ATG3Q9NT62 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC5.03□□□□□ -1.6
ATG3Q9NT62 RPS29P4-201ENST00000414733 161 ntBASIC5.03□□□□□ -1.6
ATG3Q9NT62 MRPS18BP2-201ENST00000434310 759 ntBASIC5.03□□□□□ -1.6
ATG3Q9NT62 RPL36AP6-201ENST00000435770 321 ntBASIC5.03□□□□□ -1.6
ATG3Q9NT62 AC083863.1-201ENST00000438811 231 ntBASIC5.03□□□□□ -1.6
ATG3Q9NT62 AL353748.1-201ENST00000440753 474 ntBASIC5.03□□□□□ -1.6
ATG3Q9NT62 RPL29P29-201ENST00000448725 423 ntBASIC5.03□□□□□ -1.6
ATG3Q9NT62 RN7SL585P-201ENST00000470538 280 ntBASIC5.03□□□□□ -1.6
ATG3Q9NT62 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC5.03□□□□□ -1.6
ATG3Q9NT62 AC105758.1-201ENST00000506038 399 ntBASIC5.03□□□□□ -1.6
ATG3Q9NT62 AC005798.1-201ENST00000513715 387 ntBASIC5.03□□□□□ -1.6
ATG3Q9NT62 SNORA14.1-201ENST00000516113 141 ntBASIC5.03□□□□□ -1.6
ATG3Q9NT62 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.03□□□□□ -1.6
ATG3Q9NT62 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.03□□□□□ -1.6
ATG3Q9NT62 AC008521.1-201ENST00000587471 187 ntBASIC5.03□□□□□ -1.6
ATG3Q9NT62 AL031176.1-201ENST00000604554 466 ntBASIC5.03□□□□□ -1.6
ATG3Q9NT62 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ATG3Q9NT62 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
ATG3Q9NT62 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
ATG3Q9NT62 AL359893.1-201ENST00000447628 1580 ntBASIC5.03□□□□□ -1.6
ATG3Q9NT62 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ATG3Q9NT62 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
ATG3Q9NT62 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC5.02□□□□□ -1.61
ATG3Q9NT62 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
ATG3Q9NT62 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
ATG3Q9NT62 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
ATG3Q9NT62 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
ATG3Q9NT62 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC5.02□□□□□ -1.61
ATG3Q9NT62 SNORD62.1-201ENST00000362541 86 ntBASIC5.02□□□□□ -1.61
ATG3Q9NT62 RNU6-128P-201ENST00000383976 107 ntBASIC5.02□□□□□ -1.61
ATG3Q9NT62 RNU6-746P-201ENST00000384112 109 ntBASIC5.02□□□□□ -1.61
ATG3Q9NT62 MIR491-201ENST00000384877 84 ntBASIC5.02□□□□□ -1.61
ATG3Q9NT62 MIR483-201ENST00000385070 76 ntBASIC5.02□□□□□ -1.61
ATG3Q9NT62 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
ATG3Q9NT62 SNORD70.1-201ENST00000391007 85 ntBASIC5.02□□□□□ -1.61
ATG3Q9NT62 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
ATG3Q9NT62 RNU2-14P-201ENST00000411053 191 ntBASIC5.02□□□□□ -1.61
ATG3Q9NT62 AC096664.2-201ENST00000411843 406 ntBASIC5.02□□□□□ -1.61
ATG3Q9NT62 HMGN1P24-201ENST00000412282 298 ntBASIC5.02□□□□□ -1.61
ATG3Q9NT62 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ATG3Q9NT62 AL158071.1-201ENST00000430315 461 ntBASIC5.02□□□□□ -1.61
ATG3Q9NT62 HSPD1P21-201ENST00000436541 245 ntBASIC5.02□□□□□ -1.61
ATG3Q9NT62 AC007967.1-201ENST00000455422 1159 ntBASIC5.02□□□□□ -1.61
ATG3Q9NT62 RNU7-59P-201ENST00000459101 61 ntBASIC5.02□□□□□ -1.61
ATG3Q9NT62 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.02□□□□□ -1.61
ATG3Q9NT62 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.02□□□□□ -1.61
ATG3Q9NT62 AC006517.1-201ENST00000480485 328 ntBASIC5.02□□□□□ -1.61
ATG3Q9NT62 AC108860.1-201ENST00000484521 383 ntBASIC5.02□□□□□ -1.61
ATG3Q9NT62 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5.02□□□□□ -1.61
ATG3Q9NT62 AC108078.2-201ENST00000510750 236 ntBASIC5.02□□□□□ -1.61
ATG3Q9NT62 PPBPP1-201ENST00000510807 373 ntBASIC5.02□□□□□ -1.61
ATG3Q9NT62 VWA8P1-201ENST00000510889 176 ntBASIC5.02□□□□□ -1.61
ATG3Q9NT62 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.02□□□□□ -1.61
ATG3Q9NT62 SNORA74D-201ENST00000516404 141 ntBASIC5.02□□□□□ -1.61
ATG3Q9NT62 RNU6-798P-201ENST00000516912 103 ntBASIC5.02□□□□□ -1.61
ATG3Q9NT62 RNU6-64P-201ENST00000517119 105 ntBASIC5.02□□□□□ -1.61
ATG3Q9NT62 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC5.02□□□□□ -1.61
ATG3Q9NT62 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.02□□□□□ -1.61
ATG3Q9NT62 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC5.02□□□□□ -1.61
ATG3Q9NT62 AL133271.1-201ENST00000538229 291 ntBASIC5.02□□□□□ -1.61
ATG3Q9NT62 CYP4A43P-201ENST00000568156 121 ntBASIC5.02□□□□□ -1.61
ATG3Q9NT62 MIR3941-201ENST00000582572 103 ntBASIC5.02□□□□□ -1.61
ATG3Q9NT62 MIR5188-201ENST00000583467 113 ntBASIC5.02□□□□□ -1.61
ATG3Q9NT62 MIR5187-201ENST00000583479 76 ntBASIC5.02□□□□□ -1.61
ATG3Q9NT62 MIR4293-201ENST00000584305 78 ntBASIC5.02□□□□□ -1.61
ATG3Q9NT62 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.02□□□□□ -1.61
ATG3Q9NT62 RAC1P9-201ENST00000604990 392 ntBASIC5.02□□□□□ -1.61
ATG3Q9NT62 AC012443.1-201ENST00000605605 231 ntBASIC5.02□□□□□ -1.61
ATG3Q9NT62 RNU1-30P-201ENST00000606575 163 ntBASIC5.02□□□□□ -1.61
ATG3Q9NT62 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.02□□□□□ -1.61
ATG3Q9NT62 PABPC1P7-201ENST00000413177 1513 ntBASIC5.02□□□□□ -1.61
ATG3Q9NT62 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
ATG3Q9NT62 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
ATG3Q9NT62 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
ATG3Q9NT62 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
ATG3Q9NT62 RNA5SP51-201ENST00000364750 119 ntBASIC5.01□□□□□ -1.61
ATG3Q9NT62 SNORA23-201ENST00000365128 182 ntBASIC5.01□□□□□ -1.61
ATG3Q9NT62 SNORA41-201ENST00000384675 132 ntBASIC5.01□□□□□ -1.61
ATG3Q9NT62 AP000275.1-201ENST00000411943 390 ntBASIC5.01□□□□□ -1.61
ATG3Q9NT62 RPLP0P7-201ENST00000416050 667 ntBASIC5.01□□□□□ -1.61
ATG3Q9NT62 RPL21P112-201ENST00000434403 463 ntBASIC5.01□□□□□ -1.61
ATG3Q9NT62 AC099799.1-201ENST00000439809 192 ntBASIC5.01□□□□□ -1.61
ATG3Q9NT62 RPL23AP33-201ENST00000442301 452 ntBASIC5.01□□□□□ -1.61
ATG3Q9NT62 SNORD121B-201ENST00000458838 81 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms