Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 AL583843.1-201ENST00000456070 346 ntBASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 AC083798.1-201ENST00000472671 131 ntBASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 AL163973.1-201ENST00000484753 577 ntBASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 RPL21P13-201ENST00000488305 481 ntBASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 AC026801.1-201ENST00000497178 464 ntBASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 FAM92A1P2-202ENST00000504766 877 ntBASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 RNU1-143P-201ENST00000516296 146 ntBASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 TPRKBP2-201ENST00000565969 475 ntBASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 AC073539.2-201ENST00000597113 165 ntBASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 AC068790.6-201ENST00000602558 258 ntBASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 AC007621.1-201ENST00000604544 437 ntBASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 U1.23-201ENST00000610293 146 ntBASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 RNU1-68P-201ENST00000615382 146 ntBASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 U1.39-201ENST00000621562 146 ntBASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 AC010338.1-201ENST00000621823 717 ntBASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 CR381653.2-201ENST00000624041 768 ntBASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 ASNSP3-201ENST00000451989 1306 ntBASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 AL354685.2-201ENST00000448218 1447 ntBASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CHMP1AQ9HD42 RNU6-1322P-201ENST00000364309 107 ntBASIC2.82□□□□□ -1.96
CHMP1AQ9HD42 RNA5SP139-201ENST00000364340 117 ntBASIC2.82□□□□□ -1.96
CHMP1AQ9HD42 Y_RNA.255-201ENST00000364581 97 ntBASIC2.82□□□□□ -1.96
CHMP1AQ9HD42 RNU6-715P-201ENST00000365204 103 ntBASIC2.82□□□□□ -1.96
CHMP1AQ9HD42 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
CHMP1AQ9HD42 RNU6-517P-201ENST00000384362 110 ntBASIC2.82□□□□□ -1.96
CHMP1AQ9HD42 RNU6-1179P-201ENST00000384667 107 ntBASIC2.82□□□□□ -1.96
CHMP1AQ9HD42 MIR767-201ENST00000390228 109 ntBASIC2.82□□□□□ -1.96
CHMP1AQ9HD42 RPL17P50-201ENST00000396131 546 ntBASIC2.82□□□□□ -1.96
CHMP1AQ9HD42 AL356057.2-201ENST00000403318 432 ntBASIC2.82□□□□□ -1.96
CHMP1AQ9HD42 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.82□□□□□ -1.96
CHMP1AQ9HD42 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.82□□□□□ -1.96
CHMP1AQ9HD42 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.82□□□□□ -1.96
CHMP1AQ9HD42 MTND3P21-201ENST00000433774 331 ntBASIC2.82□□□□□ -1.96
CHMP1AQ9HD42 MTND1P34-201ENST00000438556 671 ntBASIC2.82□□□□□ -1.96
CHMP1AQ9HD42 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.82□□□□□ -1.96
CHMP1AQ9HD42 RPS29P12-201ENST00000460178 152 ntBASIC2.82□□□□□ -1.96
CHMP1AQ9HD42 AC025518.1-201ENST00000479856 347 ntBASIC2.82□□□□□ -1.96
CHMP1AQ9HD42 FCF1P8-201ENST00000510322 597 ntBASIC2.82□□□□□ -1.96
CHMP1AQ9HD42 AC104619.4-201ENST00000510773 249 ntBASIC2.82□□□□□ -1.96
CHMP1AQ9HD42 RNU6-314P-201ENST00000516574 104 ntBASIC2.82□□□□□ -1.96
CHMP1AQ9HD42 RNU6-835P-201ENST00000516974 104 ntBASIC2.82□□□□□ -1.96
CHMP1AQ9HD42 SUB1P1-201ENST00000524415 382 ntBASIC2.82□□□□□ -1.96
CHMP1AQ9HD42 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.82□□□□□ -1.96
CHMP1AQ9HD42 HIF1AP1-201ENST00000553642 175 ntBASIC2.82□□□□□ -1.96
CHMP1AQ9HD42 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC2.82□□□□□ -1.96
CHMP1AQ9HD42 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.82□□□□□ -1.96
CHMP1AQ9HD42 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.82□□□□□ -1.96
CHMP1AQ9HD42 AC025281.1-201ENST00000567026 265 ntBASIC2.82□□□□□ -1.96
CHMP1AQ9HD42 MIR4782-201ENST00000577987 79 ntBASIC2.82□□□□□ -1.96
CHMP1AQ9HD42 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.82□□□□□ -1.96
CHMP1AQ9HD42 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.82□□□□□ -1.96
CHMP1AQ9HD42 AC008739.2-201ENST00000597006 317 ntBASIC2.82□□□□□ -1.96
CHMP1AQ9HD42 AC093788.1-201ENST00000609356 927 ntBASIC2.82□□□□□ -1.96
CHMP1AQ9HD42 AL359198.2-201ENST00000611836 194 ntBASIC2.82□□□□□ -1.96
CHMP1AQ9HD42 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.82□□□□□ -1.96
CHMP1AQ9HD42 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.82□□□□□ -1.96
CHMP1AQ9HD42 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.82□□□□□ -1.96
CHMP1AQ9HD42 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CHMP1AQ9HD42 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.82□□□□□ -1.96
CHMP1AQ9HD42 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CHMP1AQ9HD42 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.82□□□□□ -1.96
CHMP1AQ9HD42 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CHMP1AQ9HD42 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CHMP1AQ9HD42 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CHMP1AQ9HD42 MIR412-201ENST00000362142 91 ntBASIC2.81□□□□□ -1.96
CHMP1AQ9HD42 U3.6-201ENST00000363622 211 ntBASIC2.81□□□□□ -1.96
CHMP1AQ9HD42 RNU6-384P-201ENST00000364900 104 ntBASIC2.81□□□□□ -1.96
CHMP1AQ9HD42 Y_RNA.554-201ENST00000384672 102 ntBASIC2.81□□□□□ -1.96
CHMP1AQ9HD42 MIR518D-201ENST00000385014 87 ntBASIC2.81□□□□□ -1.96
CHMP1AQ9HD42 RNA5SP354-201ENST00000391247 136 ntBASIC2.81□□□□□ -1.96
CHMP1AQ9HD42 MIR1289-1-201ENST00000408836 144 ntBASIC2.81□□□□□ -1.96
CHMP1AQ9HD42 Y_RNA.623-201ENST00000411128 95 ntBASIC2.81□□□□□ -1.96
CHMP1AQ9HD42 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.81□□□□□ -1.96
CHMP1AQ9HD42 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.81□□□□□ -1.96
CHMP1AQ9HD42 AC073063.1-201ENST00000434352 607 ntBASIC2.81□□□□□ -1.96
CHMP1AQ9HD42 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.81□□□□□ -1.96
CHMP1AQ9HD42 NOTCH2P1-201ENST00000443481 624 ntBASIC2.81□□□□□ -1.96
CHMP1AQ9HD42 Z99127.3-201ENST00000448158 395 ntBASIC2.81□□□□□ -1.96
CHMP1AQ9HD42 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CHMP1AQ9HD42 AC115115.1-201ENST00000449927 248 ntBASIC2.81□□□□□ -1.96
CHMP1AQ9HD42 AC128713.1-201ENST00000471495 306 ntBASIC2.81□□□□□ -1.96
CHMP1AQ9HD42 RN7SL499P-201ENST00000481141 276 ntBASIC2.81□□□□□ -1.96
CHMP1AQ9HD42 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.81□□□□□ -1.96
CHMP1AQ9HD42 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.81□□□□□ -1.96
CHMP1AQ9HD42 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.81□□□□□ -1.96
CHMP1AQ9HD42 MTND3P25-201ENST00000509243 135 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms