Protein–RNA interactions for Protein: Q9H0W5

CCDC8, Coiled-coil domain-containing protein 8, humanhuman

Predicted RBP Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8Q9H0W5 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CCDC8Q9H0W5 AC121333.1-201ENST00000567488 2709 ntBASIC4.07□□□□□ -1.76
CCDC8Q9H0W5 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC8Q9H0W5 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC8Q9H0W5 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC8Q9H0W5 RNU6-371P-201ENST00000364283 108 ntBASIC4.06□□□□□ -1.76
CCDC8Q9H0W5 SNORA4.3-201ENST00000365564 137 ntBASIC4.06□□□□□ -1.76
CCDC8Q9H0W5 RPS4XP3-201ENST00000398541 413 ntBASIC4.06□□□□□ -1.76
CCDC8Q9H0W5 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC8Q9H0W5 RPL30P16-201ENST00000419341 429 ntBASIC4.06□□□□□ -1.76
CCDC8Q9H0W5 AL158156.1-201ENST00000422509 473 ntBASIC4.06□□□□□ -1.76
CCDC8Q9H0W5 RPL23AP82-202ENST00000427528 469 ntBASIC4.06□□□□□ -1.76
CCDC8Q9H0W5 AC092573.2-201ENST00000434546 243 ntBASIC4.06□□□□□ -1.76
CCDC8Q9H0W5 SNRPEP9-201ENST00000436794 238 ntBASIC4.06□□□□□ -1.76
CCDC8Q9H0W5 AL590664.1-201ENST00000448065 339 ntBASIC4.06□□□□□ -1.76
CCDC8Q9H0W5 BX510359.1-201ENST00000456973 237 ntBASIC4.06□□□□□ -1.76
CCDC8Q9H0W5 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC8Q9H0W5 RNA5SP310-201ENST00000459084 116 ntBASIC4.06□□□□□ -1.76
CCDC8Q9H0W5 CENPBD1P1-201ENST00000464061 469 ntBASIC4.06□□□□□ -1.76
CCDC8Q9H0W5 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.06□□□□□ -1.76
CCDC8Q9H0W5 Y_RNA.654-201ENST00000497848 106 ntBASIC4.06□□□□□ -1.76
CCDC8Q9H0W5 HMGB3P15-201ENST00000507326 574 ntBASIC4.06□□□□□ -1.76
CCDC8Q9H0W5 CENPUP1-201ENST00000526649 1202 ntBASIC4.06□□□□□ -1.76
CCDC8Q9H0W5 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC8Q9H0W5 AL157871.3-201ENST00000557231 293 ntBASIC4.06□□□□□ -1.76
CCDC8Q9H0W5 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC8Q9H0W5 AC018638.8-201ENST00000588755 281 ntBASIC4.06□□□□□ -1.76
CCDC8Q9H0W5 AC002076.2-201ENST00000617362 122 ntBASIC4.06□□□□□ -1.76
CCDC8Q9H0W5 AC091953.5-201ENST00000622919 233 ntBASIC4.06□□□□□ -1.76
CCDC8Q9H0W5 AC009033.1-201ENST00000624279 431 ntBASIC4.06□□□□□ -1.76
CCDC8Q9H0W5 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC8Q9H0W5 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC8Q9H0W5 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC8Q9H0W5 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC8Q9H0W5 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC8Q9H0W5 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC8Q9H0W5 Z83843.1-201ENST00000604070 3685 ntBASIC4.06□□□□□ -1.76
CCDC8Q9H0W5 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CCDC8Q9H0W5 Y_RNA.33-201ENST00000362591 102 ntBASIC4.05□□□□□ -1.76
CCDC8Q9H0W5 RNU6-140P-201ENST00000384566 108 ntBASIC4.05□□□□□ -1.76
CCDC8Q9H0W5 MIR3074-201ENST00000384885 81 ntBASIC4.05□□□□□ -1.76
CCDC8Q9H0W5 RNU2-68P-201ENST00000410878 191 ntBASIC4.05□□□□□ -1.76
CCDC8Q9H0W5 EEF1A1P40-201ENST00000412883 573 ntBASIC4.05□□□□□ -1.76
CCDC8Q9H0W5 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC8Q9H0W5 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC8Q9H0W5 AL513185.2-201ENST00000425543 193 ntBASIC4.05□□□□□ -1.76
CCDC8Q9H0W5 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC8Q9H0W5 AL121601.2-201ENST00000438019 707 ntBASIC4.05□□□□□ -1.76
CCDC8Q9H0W5 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC8Q9H0W5 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC8Q9H0W5 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC8Q9H0W5 AC018710.1-201ENST00000506509 158 ntBASIC4.05□□□□□ -1.76
CCDC8Q9H0W5 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC8Q9H0W5 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC8Q9H0W5 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC8Q9H0W5 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC8Q9H0W5 AC022690.1-201ENST00000526681 550 ntBASIC4.05□□□□□ -1.76
CCDC8Q9H0W5 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC8Q9H0W5 AC011602.1-201ENST00000546484 331 ntBASIC4.05□□□□□ -1.76
CCDC8Q9H0W5 AL121579.1-201ENST00000555129 305 ntBASIC4.05□□□□□ -1.76
CCDC8Q9H0W5 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC8Q9H0W5 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC8Q9H0W5 AMZ2P1-203ENST00000565833 850 ntBASIC4.05□□□□□ -1.76
CCDC8Q9H0W5 MIR5195-201ENST00000583555 115 ntBASIC4.05□□□□□ -1.76
CCDC8Q9H0W5 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC8Q9H0W5 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC8Q9H0W5 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC8Q9H0W5 AL035413.2-201ENST00000604801 525 ntBASIC4.05□□□□□ -1.76
CCDC8Q9H0W5 Z82243.1-201ENST00000609432 473 ntBASIC4.05□□□□□ -1.76
CCDC8Q9H0W5 FTX_3.1-201ENST00000610451 147 ntBASIC4.05□□□□□ -1.76
CCDC8Q9H0W5 DUSP12P1-201ENST00000612874 516 ntBASIC4.05□□□□□ -1.76
CCDC8Q9H0W5 MIR7112-201ENST00000616126 65 ntBASIC4.05□□□□□ -1.76
CCDC8Q9H0W5 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC8Q9H0W5 AC099506.2-201ENST00000623074 221 ntBASIC4.05□□□□□ -1.76
CCDC8Q9H0W5 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC8Q9H0W5 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC8Q9H0W5 HSPA8P4-201ENST00000511877 1920 ntBASIC4.05□□□□□ -1.76
CCDC8Q9H0W5 TNPO1P3-201ENST00000436471 2662 ntBASIC4.05□□□□□ -1.76
CCDC8Q9H0W5 AC066616.2-201ENST00000559334 1481 ntBASIC4.05□□□□□ -1.76
CCDC8Q9H0W5 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC8Q9H0W5 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC8Q9H0W5 AC005183.1-201ENST00000603687 1979 ntBASIC4.04□□□□□ -1.76
CCDC8Q9H0W5 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CCDC8Q9H0W5 U3.12-201ENST00000364498 214 ntBASIC4.04□□□□□ -1.76
CCDC8Q9H0W5 SNORD6-201ENST00000365444 73 ntBASIC4.04□□□□□ -1.76
CCDC8Q9H0W5 RNU4-20P-201ENST00000365601 151 ntBASIC4.04□□□□□ -1.76
CCDC8Q9H0W5 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC8Q9H0W5 Y_RNA.390-201ENST00000383932 102 ntBASIC4.04□□□□□ -1.76
CCDC8Q9H0W5 RNY3P14-201ENST00000384309 102 ntBASIC4.04□□□□□ -1.76
CCDC8Q9H0W5 RNU6-876P-201ENST00000391295 104 ntBASIC4.04□□□□□ -1.76
CCDC8Q9H0W5 AL357075.1-201ENST00000404107 726 ntBASIC4.04□□□□□ -1.76
CCDC8Q9H0W5 AL356776.1-201ENST00000406574 447 ntBASIC4.04□□□□□ -1.76
CCDC8Q9H0W5 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC8Q9H0W5 RPL21P111-201ENST00000418453 477 ntBASIC4.04□□□□□ -1.76
CCDC8Q9H0W5 AC012498.1-201ENST00000424037 437 ntBASIC4.04□□□□□ -1.76
CCDC8Q9H0W5 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC8Q9H0W5 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC8Q9H0W5 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC8Q9H0W5 RPS15AP27-201ENST00000449183 343 ntBASIC4.04□□□□□ -1.76
CCDC8Q9H0W5 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms