Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 RN7SL807P-201ENST00000470923 297 ntBASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 RPL31P60-201ENST00000478450 367 ntBASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 RPL9P6-201ENST00000492764 598 ntBASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 SAP18P1-201ENST00000512058 390 ntBASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 SCARNA24.1-201ENST00000516465 137 ntBASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 RNA5SP367-201ENST00000516557 118 ntBASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 RPPH1-2P-201ENST00000516688 293 ntBASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 RNU6-1220P-201ENST00000517126 108 ntBASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 AC098848.2-201ENST00000588023 330 ntBASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 AC174048.1-201ENST00000603389 144 ntBASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 AC007998.5-201ENST00000622938 237 ntBASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 AC124864.2-201ENST00000624736 186 ntBASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 CUL1P1-201ENST00000509510 2425 ntBASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC28BQ9BUN5 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC28BQ9BUN5 Y_RNA.22-201ENST00000362492 102 ntBASIC2.6□□□□□ -1.99
CCDC28BQ9BUN5 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC28BQ9BUN5 RNU6-39P-201ENST00000384344 107 ntBASIC2.6□□□□□ -1.99
CCDC28BQ9BUN5 RNU6-1215P-201ENST00000384441 102 ntBASIC2.6□□□□□ -1.99
CCDC28BQ9BUN5 RNU6-456P-201ENST00000384493 107 ntBASIC2.6□□□□□ -1.99
CCDC28BQ9BUN5 MIR493-201ENST00000385254 89 ntBASIC2.6□□□□□ -1.99
CCDC28BQ9BUN5 U3.37-201ENST00000408528 213 ntBASIC2.6□□□□□ -1.99
CCDC28BQ9BUN5 RNU2-39P-201ENST00000410604 198 ntBASIC2.6□□□□□ -1.99
CCDC28BQ9BUN5 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC28BQ9BUN5 AL513477.1-202ENST00000417061 214 ntBASIC2.6□□□□□ -1.99
CCDC28BQ9BUN5 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.6□□□□□ -1.99
CCDC28BQ9BUN5 SUMO1P4-201ENST00000429430 302 ntBASIC2.6□□□□□ -1.99
CCDC28BQ9BUN5 AC022018.1-201ENST00000430685 241 ntBASIC2.6□□□□□ -1.99
CCDC28BQ9BUN5 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.6□□□□□ -1.99
CCDC28BQ9BUN5 TAAR7P-201ENST00000436141 242 ntBASIC2.6□□□□□ -1.99
CCDC28BQ9BUN5 NDUFB4P6-201ENST00000436819 366 ntBASIC2.6□□□□□ -1.99
CCDC28BQ9BUN5 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC28BQ9BUN5 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC28BQ9BUN5 AC009237.8-201ENST00000445492 379 ntBASIC2.6□□□□□ -1.99
CCDC28BQ9BUN5 CBWD4P-201ENST00000445695 655 ntBASIC2.6□□□□□ -1.99
CCDC28BQ9BUN5 AL590664.1-201ENST00000448065 339 ntBASIC2.6□□□□□ -1.99
CCDC28BQ9BUN5 PSPHP1-201ENST00000450062 261 ntBASIC2.6□□□□□ -1.99
CCDC28BQ9BUN5 AC087588.1-201ENST00000462203 316 ntBASIC2.6□□□□□ -1.99
CCDC28BQ9BUN5 AC079382.1-201ENST00000493346 557 ntBASIC2.6□□□□□ -1.99
CCDC28BQ9BUN5 AC117522.1-201ENST00000509821 380 ntBASIC2.6□□□□□ -1.99
CCDC28BQ9BUN5 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC28BQ9BUN5 RNU6-1256P-201ENST00000516539 103 ntBASIC2.6□□□□□ -1.99
CCDC28BQ9BUN5 AP006587.4-201ENST00000526053 529 ntBASIC2.6□□□□□ -1.99
CCDC28BQ9BUN5 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC28BQ9BUN5 AP003034.1-201ENST00000534621 422 ntBASIC2.6□□□□□ -1.99
CCDC28BQ9BUN5 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC28BQ9BUN5 AL359212.1-201ENST00000556608 614 ntBASIC2.6□□□□□ -1.99
CCDC28BQ9BUN5 ZNF519P2-201ENST00000557032 169 ntBASIC2.6□□□□□ -1.99
CCDC28BQ9BUN5 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC28BQ9BUN5 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC28BQ9BUN5 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.6□□□□□ -1.99
CCDC28BQ9BUN5 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.6□□□□□ -1.99
CCDC28BQ9BUN5 AC005609.4-201ENST00000625071 447 ntBASIC2.6□□□□□ -1.99
CCDC28BQ9BUN5 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.6□□□□□ -1.99
CCDC28BQ9BUN5 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.6□□□□□ -1.99
CCDC28BQ9BUN5 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.6□□□□□ -1.99
CCDC28BQ9BUN5 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
CCDC28BQ9BUN5 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
CCDC28BQ9BUN5 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.59□□□□□ -1.99
CCDC28BQ9BUN5 Y_RNA.1-201ENST00000352915 104 ntBASIC2.59□□□□□ -1.99
CCDC28BQ9BUN5 Y_RNA.6-201ENST00000362350 114 ntBASIC2.59□□□□□ -1.99
CCDC28BQ9BUN5 RNU6-1120P-201ENST00000362988 108 ntBASIC2.59□□□□□ -1.99
CCDC28BQ9BUN5 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
CCDC28BQ9BUN5 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CCDC28BQ9BUN5 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.59□□□□□ -1.99
CCDC28BQ9BUN5 RNU6-741P-201ENST00000383889 107 ntBASIC2.59□□□□□ -1.99
CCDC28BQ9BUN5 RNU6-701P-201ENST00000384059 107 ntBASIC2.59□□□□□ -1.99
CCDC28BQ9BUN5 RNU6-74P-201ENST00000384235 107 ntBASIC2.59□□□□□ -1.99
CCDC28BQ9BUN5 RNU6-817P-201ENST00000391083 104 ntBASIC2.59□□□□□ -1.99
CCDC28BQ9BUN5 RNA5SP252-201ENST00000391131 119 ntBASIC2.59□□□□□ -1.99
CCDC28BQ9BUN5 RNU4-55P-201ENST00000410731 137 ntBASIC2.59□□□□□ -1.99
CCDC28BQ9BUN5 MTATP6P18-201ENST00000417994 673 ntBASIC2.59□□□□□ -1.99
CCDC28BQ9BUN5 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC28BQ9BUN5 AC002486.1-201ENST00000435098 391 ntBASIC2.59□□□□□ -1.99
CCDC28BQ9BUN5 MTATP6P30-201ENST00000443540 664 ntBASIC2.59□□□□□ -1.99
CCDC28BQ9BUN5 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CCDC28BQ9BUN5 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC28BQ9BUN5 AC126389.1-201ENST00000477436 290 ntBASIC2.59□□□□□ -1.99
CCDC28BQ9BUN5 RPL30P14-201ENST00000482744 348 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms