Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC0.91□□□□□ -2.26
LIMD2Q9BT23 AP000889.1-201ENST00000530968 660 ntBASIC0.91□□□□□ -2.26
LIMD2Q9BT23 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.91□□□□□ -2.26
LIMD2Q9BT23 AP000873.5-201ENST00000533906 236 ntBASIC0.91□□□□□ -2.26
LIMD2Q9BT23 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC0.91□□□□□ -2.26
LIMD2Q9BT23 IMMP1LP2-201ENST00000552954 492 ntBASIC0.91□□□□□ -2.26
LIMD2Q9BT23 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC0.91□□□□□ -2.26
LIMD2Q9BT23 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC0.91□□□□□ -2.26
LIMD2Q9BT23 SUB1P3-201ENST00000564581 315 ntBASIC0.91□□□□□ -2.26
LIMD2Q9BT23 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC0.91□□□□□ -2.26
LIMD2Q9BT23 RN7SL622P-201ENST00000585292 275 ntBASIC0.91□□□□□ -2.26
LIMD2Q9BT23 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC0.91□□□□□ -2.26
LIMD2Q9BT23 AP002906.1-201ENST00000603405 233 ntBASIC0.91□□□□□ -2.26
LIMD2Q9BT23 MTCYBP22-201ENST00000603788 447 ntBASIC0.91□□□□□ -2.26
LIMD2Q9BT23 AL355598.1-201ENST00000604169 202 ntBASIC0.91□□□□□ -2.26
LIMD2Q9BT23 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.91□□□□□ -2.26
LIMD2Q9BT23 AC010133.1-201ENST00000615809 842 ntBASIC0.91□□□□□ -2.26
LIMD2Q9BT23 AC253576.2-201ENST00000618815 580 ntBASIC0.91□□□□□ -2.26
LIMD2Q9BT23 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
LIMD2Q9BT23 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
LIMD2Q9BT23 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
LIMD2Q9BT23 MTND5P10-201ENST00000603719 1809 ntBASIC0.91□□□□□ -2.26
LIMD2Q9BT23 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
LIMD2Q9BT23 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC0.91□□□□□ -2.26
LIMD2Q9BT23 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.9□□□□□ -2.26
LIMD2Q9BT23 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC0.9□□□□□ -2.27
LIMD2Q9BT23 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC0.9□□□□□ -2.27
LIMD2Q9BT23 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.9□□□□□ -2.27
LIMD2Q9BT23 SNORA67.5-201ENST00000391036 107 ntBASIC0.9□□□□□ -2.27
LIMD2Q9BT23 RNA5SP465-201ENST00000391195 109 ntBASIC0.9□□□□□ -2.27
LIMD2Q9BT23 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
LIMD2Q9BT23 UBE2V1P4-201ENST00000425374 344 ntBASIC0.9□□□□□ -2.27
LIMD2Q9BT23 MTCYBP32-201ENST00000427945 1084 ntBASIC0.9□□□□□ -2.27
LIMD2Q9BT23 HMGN2P3-201ENST00000433603 273 ntBASIC0.9□□□□□ -2.27
LIMD2Q9BT23 HMGN2P5-201ENST00000436882 273 ntBASIC0.9□□□□□ -2.27
LIMD2Q9BT23 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC0.9□□□□□ -2.27
LIMD2Q9BT23 AC114878.1-201ENST00000441166 358 ntBASIC0.9□□□□□ -2.27
LIMD2Q9BT23 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC0.9□□□□□ -2.27
LIMD2Q9BT23 NDUFAF4P2-201ENST00000445374 520 ntBASIC0.9□□□□□ -2.27
LIMD2Q9BT23 AL137159.1-201ENST00000452808 512 ntBASIC0.9□□□□□ -2.27
LIMD2Q9BT23 snoU13.26-201ENST00000459452 105 ntBASIC0.9□□□□□ -2.27
LIMD2Q9BT23 AC008379.1-201ENST00000463655 464 ntBASIC0.9□□□□□ -2.27
LIMD2Q9BT23 AC108729.2-201ENST00000476543 840 ntBASIC0.9□□□□□ -2.27
LIMD2Q9BT23 FAM206BP-201ENST00000510179 541 ntBASIC0.9□□□□□ -2.27
LIMD2Q9BT23 AC093677.1-201ENST00000514414 678 ntBASIC0.9□□□□□ -2.27
LIMD2Q9BT23 SMURF2P1-201ENST00000514992 481 ntBASIC0.9□□□□□ -2.27
LIMD2Q9BT23 RNU6-927P-201ENST00000516199 100 ntBASIC0.9□□□□□ -2.27
LIMD2Q9BT23 RNU6-1261P-201ENST00000517194 104 ntBASIC0.9□□□□□ -2.27
LIMD2Q9BT23 AC022861.1-201ENST00000522981 663 ntBASIC0.9□□□□□ -2.27
LIMD2Q9BT23 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.9□□□□□ -2.27
LIMD2Q9BT23 AK6P1-201ENST00000540219 478 ntBASIC0.9□□□□□ -2.27
LIMD2Q9BT23 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC0.9□□□□□ -2.27
LIMD2Q9BT23 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC0.9□□□□□ -2.27
LIMD2Q9BT23 AC090079.2-201ENST00000575289 768 ntBASIC0.9□□□□□ -2.27
LIMD2Q9BT23 MIR3167-201ENST00000579623 85 ntBASIC0.9□□□□□ -2.27
LIMD2Q9BT23 MIR3683-201ENST00000580847 82 ntBASIC0.9□□□□□ -2.27
LIMD2Q9BT23 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC0.9□□□□□ -2.27
LIMD2Q9BT23 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.9□□□□□ -2.27
LIMD2Q9BT23 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC0.9□□□□□ -2.27
LIMD2Q9BT23 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC0.9□□□□□ -2.27
LIMD2Q9BT23 AL158827.2-201ENST00000602494 330 ntBASIC0.9□□□□□ -2.27
LIMD2Q9BT23 AC010900.2-201ENST00000604508 210 ntBASIC0.9□□□□□ -2.27
LIMD2Q9BT23 AC018638.7-201ENST00000605836 1114 ntBASIC0.9□□□□□ -2.27
LIMD2Q9BT23 AP005229.2-201ENST00000609980 697 ntBASIC0.9□□□□□ -2.27
LIMD2Q9BT23 AL109620.1-201ENST00000618738 1197 ntBASIC0.9□□□□□ -2.27
LIMD2Q9BT23 AC138627.2-201ENST00000624202 601 ntBASIC0.9□□□□□ -2.27
LIMD2Q9BT23 AL691447.3-201ENST00000635020 330 ntBASIC0.9□□□□□ -2.27
LIMD2Q9BT23 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
LIMD2Q9BT23 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
LIMD2Q9BT23 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
LIMD2Q9BT23 MIR29C-201ENST00000385231 88 ntBASIC0.89□□□□□ -2.27
LIMD2Q9BT23 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
LIMD2Q9BT23 MIR1304-201ENST00000408243 91 ntBASIC0.89□□□□□ -2.27
LIMD2Q9BT23 MTND1P21-201ENST00000412991 285 ntBASIC0.89□□□□□ -2.27
LIMD2Q9BT23 AL158050.1-201ENST00000416077 457 ntBASIC0.89□□□□□ -2.27
LIMD2Q9BT23 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.89□□□□□ -2.27
LIMD2Q9BT23 USP9YP24-201ENST00000434374 697 ntBASIC0.89□□□□□ -2.27
LIMD2Q9BT23 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC0.89□□□□□ -2.27
LIMD2Q9BT23 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC0.89□□□□□ -2.27
LIMD2Q9BT23 AC002381.1-201ENST00000447049 280 ntBASIC0.89□□□□□ -2.27
LIMD2Q9BT23 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.89□□□□□ -2.27
LIMD2Q9BT23 COX6CP18-201ENST00000448769 222 ntBASIC0.89□□□□□ -2.27
LIMD2Q9BT23 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.89□□□□□ -2.27
LIMD2Q9BT23 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC0.89□□□□□ -2.27
LIMD2Q9BT23 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC0.89□□□□□ -2.27
LIMD2Q9BT23 RPL36AP48-201ENST00000485521 314 ntBASIC0.89□□□□□ -2.27
LIMD2Q9BT23 RN7SKP179-201ENST00000516126 217 ntBASIC0.89□□□□□ -2.27
LIMD2Q9BT23 RNA5SP290-201ENST00000517133 127 ntBASIC0.89□□□□□ -2.27
LIMD2Q9BT23 RNU6-840P-201ENST00000517275 65 ntBASIC0.89□□□□□ -2.27
LIMD2Q9BT23 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.89□□□□□ -2.27
LIMD2Q9BT23 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC0.89□□□□□ -2.27
LIMD2Q9BT23 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC0.89□□□□□ -2.27
LIMD2Q9BT23 AP003497.1-201ENST00000528472 562 ntBASIC0.89□□□□□ -2.27
LIMD2Q9BT23 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC0.89□□□□□ -2.27
LIMD2Q9BT23 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC0.89□□□□□ -2.27
LIMD2Q9BT23 AL390208.1-201ENST00000605885 644 ntBASIC0.89□□□□□ -2.27
LIMD2Q9BT23 AL450270.1-201ENST00000606160 391 ntBASIC0.89□□□□□ -2.27
LIMD2Q9BT23 U1.36-201ENST00000620684 176 ntBASIC0.89□□□□□ -2.27
LIMD2Q9BT23 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.89□□□□□ -2.27
LIMD2Q9BT23 AC091812.1-201ENST00000432235 1948 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms