Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 RPS15AP34-201ENST00000487776 387 ntBASIC3.17□□□□□ -1.9
SDF4Q9BRK5 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.17□□□□□ -1.9
SDF4Q9BRK5 MRPS36P2-201ENST00000512569 299 ntBASIC3.17□□□□□ -1.9
SDF4Q9BRK5 RN7SKP132-201ENST00000516001 208 ntBASIC3.17□□□□□ -1.9
SDF4Q9BRK5 Y_RNA.689-201ENST00000516589 107 ntBASIC3.17□□□□□ -1.9
SDF4Q9BRK5 RNU6-56P-201ENST00000516986 93 ntBASIC3.17□□□□□ -1.9
SDF4Q9BRK5 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.17□□□□□ -1.9
SDF4Q9BRK5 AP003072.2-201ENST00000527756 676 ntBASIC3.17□□□□□ -1.9
SDF4Q9BRK5 AC087883.1-201ENST00000551882 391 ntBASIC3.17□□□□□ -1.9
SDF4Q9BRK5 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.17□□□□□ -1.9
SDF4Q9BRK5 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.17□□□□□ -1.9
SDF4Q9BRK5 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.17□□□□□ -1.9
SDF4Q9BRK5 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.17□□□□□ -1.9
SDF4Q9BRK5 AC137800.2-201ENST00000574375 120 ntBASIC3.17□□□□□ -1.9
SDF4Q9BRK5 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.17□□□□□ -1.9
SDF4Q9BRK5 OR2AS2P-201ENST00000606902 342 ntBASIC3.17□□□□□ -1.9
SDF4Q9BRK5 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
SDF4Q9BRK5 AL512643.1-201ENST00000635735 524 ntBASIC3.17□□□□□ -1.9
SDF4Q9BRK5 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
SDF4Q9BRK5 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.17□□□□□ -1.9
SDF4Q9BRK5 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
SDF4Q9BRK5 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
SDF4Q9BRK5 TEX21P-201ENST00000447107 1476 ntBASIC3.16□□□□□ -1.9
SDF4Q9BRK5 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
SDF4Q9BRK5 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.16□□□□□ -1.9
SDF4Q9BRK5 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SDF4Q9BRK5 MIR26A1-201ENST00000362205 77 ntBASIC3.16□□□□□ -1.9
SDF4Q9BRK5 Y_RNA.22-201ENST00000362492 102 ntBASIC3.16□□□□□ -1.9
SDF4Q9BRK5 SNORA68.1-201ENST00000364537 132 ntBASIC3.16□□□□□ -1.9
SDF4Q9BRK5 SNORA4.3-201ENST00000365564 137 ntBASIC3.16□□□□□ -1.9
SDF4Q9BRK5 AC092809.3-201ENST00000415453 231 ntBASIC3.16□□□□□ -1.9
SDF4Q9BRK5 MTND3P17-201ENST00000416968 344 ntBASIC3.16□□□□□ -1.9
SDF4Q9BRK5 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.16□□□□□ -1.9
SDF4Q9BRK5 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.16□□□□□ -1.9
SDF4Q9BRK5 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.16□□□□□ -1.9
SDF4Q9BRK5 AL513043.1-201ENST00000439124 535 ntBASIC3.16□□□□□ -1.9
SDF4Q9BRK5 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.16□□□□□ -1.9
SDF4Q9BRK5 Z96811.1-201ENST00000445880 108 ntBASIC3.16□□□□□ -1.9
SDF4Q9BRK5 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.16□□□□□ -1.9
SDF4Q9BRK5 RN7SL297P-201ENST00000483161 293 ntBASIC3.16□□□□□ -1.9
SDF4Q9BRK5 AC105252.1-201ENST00000503089 286 ntBASIC3.16□□□□□ -1.9
SDF4Q9BRK5 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.16□□□□□ -1.9
SDF4Q9BRK5 AC117522.1-201ENST00000509821 380 ntBASIC3.16□□□□□ -1.9
SDF4Q9BRK5 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.16□□□□□ -1.9
SDF4Q9BRK5 RNU6-1315P-201ENST00000517187 99 ntBASIC3.16□□□□□ -1.9
SDF4Q9BRK5 AC009902.1-201ENST00000519351 183 ntBASIC3.16□□□□□ -1.9
SDF4Q9BRK5 AP000889.1-201ENST00000530968 660 ntBASIC3.16□□□□□ -1.9
SDF4Q9BRK5 AP002453.2-201ENST00000533503 320 ntBASIC3.16□□□□□ -1.9
SDF4Q9BRK5 AC021739.1-201ENST00000559631 174 ntBASIC3.16□□□□□ -1.9
SDF4Q9BRK5 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.16□□□□□ -1.9
SDF4Q9BRK5 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.16□□□□□ -1.9
SDF4Q9BRK5 SEPT7P9-203ENST00000604116 343 ntBASIC3.16□□□□□ -1.9
SDF4Q9BRK5 AC007938.3-201ENST00000604965 623 ntBASIC3.16□□□□□ -1.9
SDF4Q9BRK5 MIR15A-201ENST00000607334 83 ntBASIC3.16□□□□□ -1.9
SDF4Q9BRK5 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.16□□□□□ -1.9
SDF4Q9BRK5 MIR6852-201ENST00000621699 66 ntBASIC3.16□□□□□ -1.9
SDF4Q9BRK5 Z69908.1-201ENST00000622603 247 ntBASIC3.16□□□□□ -1.9
SDF4Q9BRK5 CU459211.1-201ENST00000635667 749 ntBASIC3.16□□□□□ -1.9
SDF4Q9BRK5 MIR3199-2-201ENST00000636243 86 ntBASIC3.16□□□□□ -1.9
SDF4Q9BRK5 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
SDF4Q9BRK5 AC010889.1-201ENST00000566193 2666 ntBASIC3.15□□□□□ -1.91
SDF4Q9BRK5 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SDF4Q9BRK5 RNU6-658P-201ENST00000384606 106 ntBASIC3.15□□□□□ -1.91
SDF4Q9BRK5 RN7SKP142-201ENST00000411236 328 ntBASIC3.15□□□□□ -1.91
SDF4Q9BRK5 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.15□□□□□ -1.91
SDF4Q9BRK5 AL513477.1-202ENST00000417061 214 ntBASIC3.15□□□□□ -1.91
SDF4Q9BRK5 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.15□□□□□ -1.91
SDF4Q9BRK5 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.15□□□□□ -1.91
SDF4Q9BRK5 AC104332.2-201ENST00000429959 156 ntBASIC3.15□□□□□ -1.91
SDF4Q9BRK5 AL353706.1-201ENST00000436728 494 ntBASIC3.15□□□□□ -1.91
SDF4Q9BRK5 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.15□□□□□ -1.91
SDF4Q9BRK5 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SDF4Q9BRK5 AC107626.1-201ENST00000471084 183 ntBASIC3.15□□□□□ -1.91
SDF4Q9BRK5 TRBV1-201ENST00000476502 284 ntBASIC3.15□□□□□ -1.91
SDF4Q9BRK5 RPS27AP9-201ENST00000477681 438 ntBASIC3.15□□□□□ -1.91
SDF4Q9BRK5 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.15□□□□□ -1.91
SDF4Q9BRK5 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.15□□□□□ -1.91
SDF4Q9BRK5 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.15□□□□□ -1.91
SDF4Q9BRK5 AC098591.2-201ENST00000510152 315 ntBASIC3.15□□□□□ -1.91
SDF4Q9BRK5 AC091965.2-201ENST00000512324 613 ntBASIC3.15□□□□□ -1.91
SDF4Q9BRK5 Y_RNA.695-201ENST00000516715 107 ntBASIC3.15□□□□□ -1.91
SDF4Q9BRK5 SNORD19.2-201ENST00000516978 73 ntBASIC3.15□□□□□ -1.91
SDF4Q9BRK5 AC007536.1-201ENST00000533382 349 ntBASIC3.15□□□□□ -1.91
SDF4Q9BRK5 ELOCP31-201ENST00000540463 467 ntBASIC3.15□□□□□ -1.91
SDF4Q9BRK5 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.15□□□□□ -1.91
SDF4Q9BRK5 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.15□□□□□ -1.91
SDF4Q9BRK5 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.15□□□□□ -1.91
SDF4Q9BRK5 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.15□□□□□ -1.91
SDF4Q9BRK5 MIR1273C-201ENST00000578669 77 ntBASIC3.15□□□□□ -1.91
SDF4Q9BRK5 AC024619.4-201ENST00000580924 316 ntBASIC3.15□□□□□ -1.91
SDF4Q9BRK5 AC110760.3-201ENST00000598794 467 ntBASIC3.15□□□□□ -1.91
SDF4Q9BRK5 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.15□□□□□ -1.91
SDF4Q9BRK5 AL359547.2-201ENST00000615810 418 ntBASIC3.15□□□□□ -1.91
SDF4Q9BRK5 AC110994.2-201ENST00000635481 492 ntBASIC3.15□□□□□ -1.91
SDF4Q9BRK5 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.15□□□□□ -1.91
SDF4Q9BRK5 ELL2P3-201ENST00000457883 1602 ntBASIC3.15□□□□□ -1.91
SDF4Q9BRK5 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.14□□□□□ -1.91
SDF4Q9BRK5 RN7SKP226-201ENST00000364912 300 ntBASIC3.14□□□□□ -1.91
SDF4Q9BRK5 AL138827.1-201ENST00000402666 306 ntBASIC3.14□□□□□ -1.91
SDF4Q9BRK5 AL513475.1-201ENST00000406602 315 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms