Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 FABP5P15-201ENST00000453566 214 ntBASIC1.8□□□□□ -2.12
VAT1Q99536 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.8□□□□□ -2.12
VAT1Q99536 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.8□□□□□ -2.12
VAT1Q99536 AC055731.1-201ENST00000474387 401 ntBASIC1.8□□□□□ -2.12
VAT1Q99536 RPL21P99-201ENST00000480369 423 ntBASIC1.8□□□□□ -2.12
VAT1Q99536 AC016550.1-201ENST00000505348 785 ntBASIC1.8□□□□□ -2.12
VAT1Q99536 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.8□□□□□ -2.12
VAT1Q99536 RN7SKP258-201ENST00000517151 304 ntBASIC1.8□□□□□ -2.12
VAT1Q99536 SNORA31.25-201ENST00000517242 134 ntBASIC1.8□□□□□ -2.12
VAT1Q99536 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.8□□□□□ -2.12
VAT1Q99536 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.8□□□□□ -2.12
VAT1Q99536 AC093012.1-202ENST00000549403 582 ntBASIC1.8□□□□□ -2.12
VAT1Q99536 MRPS36P5-201ENST00000551909 298 ntBASIC1.8□□□□□ -2.12
VAT1Q99536 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.8□□□□□ -2.12
VAT1Q99536 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.8□□□□□ -2.12
VAT1Q99536 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.8□□□□□ -2.12
VAT1Q99536 AC011939.3-201ENST00000613686 466 ntBASIC1.8□□□□□ -2.12
VAT1Q99536 SDR42E1P4-201ENST00000620894 481 ntBASIC1.8□□□□□ -2.12
VAT1Q99536 AP000676.3-201ENST00000623299 569 ntBASIC1.8□□□□□ -2.12
VAT1Q99536 AC097655.1-201ENST00000635075 318 ntBASIC1.8□□□□□ -2.12
VAT1Q99536 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC1.8□□□□□ -2.12
VAT1Q99536 LINC02211-204ENST00000642024 1070 ntBASIC1.8□□□□□ -2.12
VAT1Q99536 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.8□□□□□ -2.12
VAT1Q99536 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.8□□□□□ -2.12
VAT1Q99536 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
VAT1Q99536 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
VAT1Q99536 RNU6-512P-201ENST00000364438 103 ntBASIC1.79□□□□□ -2.12
VAT1Q99536 RNU6-19P-201ENST00000384718 107 ntBASIC1.79□□□□□ -2.12
VAT1Q99536 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.79□□□□□ -2.12
VAT1Q99536 RNA5SP270-201ENST00000411361 118 ntBASIC1.79□□□□□ -2.12
VAT1Q99536 ISCA1P1-201ENST00000426679 387 ntBASIC1.79□□□□□ -2.12
VAT1Q99536 RPL36AP53-201ENST00000432891 316 ntBASIC1.79□□□□□ -2.12
VAT1Q99536 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.79□□□□□ -2.12
VAT1Q99536 USP9YP15-201ENST00000442391 422 ntBASIC1.79□□□□□ -2.12
VAT1Q99536 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.79□□□□□ -2.12
VAT1Q99536 AP001324.2-201ENST00000461163 319 ntBASIC1.79□□□□□ -2.12
VAT1Q99536 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1.79□□□□□ -2.12
VAT1Q99536 RPS29P11-201ENST00000496507 171 ntBASIC1.79□□□□□ -2.12
VAT1Q99536 AC093281.2-201ENST00000510153 597 ntBASIC1.79□□□□□ -2.12
VAT1Q99536 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.79□□□□□ -2.12
VAT1Q99536 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.79□□□□□ -2.12
VAT1Q99536 AC118273.2-201ENST00000532092 465 ntBASIC1.79□□□□□ -2.12
VAT1Q99536 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.79□□□□□ -2.12
VAT1Q99536 AC073544.2-201ENST00000601155 540 ntBASIC1.79□□□□□ -2.12
VAT1Q99536 AL606834.3-201ENST00000602615 496 ntBASIC1.79□□□□□ -2.12
VAT1Q99536 AL355598.1-201ENST00000604169 202 ntBASIC1.79□□□□□ -2.12
VAT1Q99536 AC068276.1-201ENST00000605793 379 ntBASIC1.79□□□□□ -2.12
VAT1Q99536 AC013412.1-201ENST00000610687 192 ntBASIC1.79□□□□□ -2.12
VAT1Q99536 AL133445.2-201ENST00000611191 527 ntBASIC1.79□□□□□ -2.12
VAT1Q99536 AC009233.1-201ENST00000616477 371 ntBASIC1.79□□□□□ -2.12
VAT1Q99536 PCMTD1P7-201ENST00000634506 357 ntBASIC1.79□□□□□ -2.12
VAT1Q99536 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.79□□□□□ -2.12
VAT1Q99536 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.78□□□□□ -2.12
VAT1Q99536 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
VAT1Q99536 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
VAT1Q99536 UBE2L2-201ENST00000254302 429 ntBASIC1.78□□□□□ -2.12
VAT1Q99536 Y_RNA.311-201ENST00000365068 96 ntBASIC1.78□□□□□ -2.12
VAT1Q99536 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.78□□□□□ -2.12
VAT1Q99536 Y_RNA.472-201ENST00000384322 102 ntBASIC1.78□□□□□ -2.12
VAT1Q99536 RNU6-1257P-201ENST00000384625 110 ntBASIC1.78□□□□□ -2.12
VAT1Q99536 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.78□□□□□ -2.12
VAT1Q99536 ZNF90P2-204ENST00000419323 1075 ntBASIC1.78□□□□□ -2.12
VAT1Q99536 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.78□□□□□ -2.12
VAT1Q99536 AC003989.2-201ENST00000440224 169 ntBASIC1.78□□□□□ -2.12
VAT1Q99536 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.78□□□□□ -2.12
VAT1Q99536 ELOCP30-201ENST00000447108 299 ntBASIC1.78□□□□□ -2.12
VAT1Q99536 AP000542.1-201ENST00000448473 371 ntBASIC1.78□□□□□ -2.12
VAT1Q99536 PAXBP1P1-201ENST00000449315 447 ntBASIC1.78□□□□□ -2.12
VAT1Q99536 MTND1P16-201ENST00000465177 898 ntBASIC1.78□□□□□ -2.12
VAT1Q99536 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.78□□□□□ -2.12
VAT1Q99536 AC139453.3-201ENST00000493276 369 ntBASIC1.78□□□□□ -2.12
VAT1Q99536 AC026801.1-201ENST00000497178 464 ntBASIC1.78□□□□□ -2.12
VAT1Q99536 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.78□□□□□ -2.12
VAT1Q99536 MRPS33P3-201ENST00000513456 322 ntBASIC1.78□□□□□ -2.12
VAT1Q99536 RNA5SP112-201ENST00000515937 99 ntBASIC1.78□□□□□ -2.12
VAT1Q99536 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.78□□□□□ -2.12
VAT1Q99536 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.78□□□□□ -2.12
VAT1Q99536 AC025165.5-201ENST00000602802 578 ntBASIC1.78□□□□□ -2.12
VAT1Q99536 AL138963.2-201ENST00000605137 226 ntBASIC1.78□□□□□ -2.12
VAT1Q99536 AC131235.4-201ENST00000609288 620 ntBASIC1.78□□□□□ -2.12
VAT1Q99536 U4atac.1-201ENST00000618345 95 ntBASIC1.78□□□□□ -2.12
VAT1Q99536 AL109620.1-201ENST00000618738 1197 ntBASIC1.78□□□□□ -2.12
VAT1Q99536 AC012150.2-201ENST00000621300 544 ntBASIC1.78□□□□□ -2.12
VAT1Q99536 AC112204.3-201ENST00000623822 332 ntBASIC1.78□□□□□ -2.12
VAT1Q99536 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.78□□□□□ -2.13
VAT1Q99536 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.77□□□□□ -2.13
VAT1Q99536 MTND5P33-201ENST00000571250 1450 ntBASIC1.77□□□□□ -2.13
VAT1Q99536 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
VAT1Q99536 NACAP2-201ENST00000318548 624 ntBASIC1.77□□□□□ -2.13
VAT1Q99536 SNORD48-201ENST00000364953 64 ntBASIC1.77□□□□□ -2.13
VAT1Q99536 MIR147B-201ENST00000390185 80 ntBASIC1.77□□□□□ -2.13
VAT1Q99536 U8.13-201ENST00000390842 128 ntBASIC1.77□□□□□ -2.13
VAT1Q99536 AL021407.1-201ENST00000404531 386 ntBASIC1.77□□□□□ -2.13
VAT1Q99536 AL359634.1-202ENST00000404721 284 ntBASIC1.77□□□□□ -2.13
VAT1Q99536 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.77□□□□□ -2.13
VAT1Q99536 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.77□□□□□ -2.13
VAT1Q99536 PTGES3P4-201ENST00000426243 356 ntBASIC1.77□□□□□ -2.13
VAT1Q99536 AL645568.3-201ENST00000433683 316 ntBASIC1.77□□□□□ -2.13
VAT1Q99536 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.77□□□□□ -2.13
VAT1Q99536 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms