Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 AC090096.1-201ENST00000489168 390 ntBASIC1.9□□□□□ -2.11
LINC00477Q96M19 MRPS36P2-201ENST00000512569 299 ntBASIC1.9□□□□□ -2.11
LINC00477Q96M19 MTND5P13-201ENST00000513046 1079 ntBASIC1.9□□□□□ -2.11
LINC00477Q96M19 Y_RNA.695-201ENST00000516715 107 ntBASIC1.9□□□□□ -2.11
LINC00477Q96M19 SCARNA11.3-201ENST00000517276 130 ntBASIC1.9□□□□□ -2.11
LINC00477Q96M19 IGHVII-62-1-201ENST00000519283 235 ntBASIC1.9□□□□□ -2.11
LINC00477Q96M19 AC022616.3-201ENST00000523940 148 ntBASIC1.9□□□□□ -2.11
LINC00477Q96M19 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.9□□□□□ -2.11
LINC00477Q96M19 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.9□□□□□ -2.11
LINC00477Q96M19 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.9□□□□□ -2.11
LINC00477Q96M19 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.9□□□□□ -2.11
LINC00477Q96M19 MIR3167-201ENST00000579623 85 ntBASIC1.9□□□□□ -2.11
LINC00477Q96M19 AC073544.2-201ENST00000601155 540 ntBASIC1.9□□□□□ -2.11
LINC00477Q96M19 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC1.9□□□□□ -2.11
LINC00477Q96M19 AC004908.2-201ENST00000609090 574 ntBASIC1.9□□□□□ -2.11
LINC00477Q96M19 MIR6840-201ENST00000611937 71 ntBASIC1.9□□□□□ -2.11
LINC00477Q96M19 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
LINC00477Q96M19 SDR42E1P2-201ENST00000614861 481 ntBASIC1.9□□□□□ -2.11
LINC00477Q96M19 uc_338.12-201ENST00000616344 181 ntBASIC1.9□□□□□ -2.11
LINC00477Q96M19 MTND1P37-201ENST00000636562 264 ntBASIC1.9□□□□□ -2.11
LINC00477Q96M19 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
LINC00477Q96M19 TEX21P-201ENST00000447107 1476 ntBASIC1.89□□□□□ -2.11
LINC00477Q96M19 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
LINC00477Q96M19 FGF7P2-201ENST00000332473 296 ntBASIC1.89□□□□□ -2.11
LINC00477Q96M19 RNY4P34-201ENST00000364779 95 ntBASIC1.89□□□□□ -2.11
LINC00477Q96M19 SNORA9-201ENST00000384215 133 ntBASIC1.89□□□□□ -2.11
LINC00477Q96M19 AL360182.1-201ENST00000397433 468 ntBASIC1.89□□□□□ -2.11
LINC00477Q96M19 AL122016.1-201ENST00000403365 367 ntBASIC1.89□□□□□ -2.11
LINC00477Q96M19 NDUFS5P1-201ENST00000405668 289 ntBASIC1.89□□□□□ -2.11
LINC00477Q96M19 AC114491.1-201ENST00000416095 246 ntBASIC1.89□□□□□ -2.11
LINC00477Q96M19 BTF3L4P3-201ENST00000418879 476 ntBASIC1.89□□□□□ -2.11
LINC00477Q96M19 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.89□□□□□ -2.11
LINC00477Q96M19 ISCA1P6-201ENST00000427740 390 ntBASIC1.89□□□□□ -2.11
LINC00477Q96M19 CALM2P2-201ENST00000428512 440 ntBASIC1.89□□□□□ -2.11
LINC00477Q96M19 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.89□□□□□ -2.11
LINC00477Q96M19 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.89□□□□□ -2.11
LINC00477Q96M19 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.89□□□□□ -2.11
LINC00477Q96M19 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.89□□□□□ -2.11
LINC00477Q96M19 AC025750.2-201ENST00000442609 450 ntBASIC1.89□□□□□ -2.11
LINC00477Q96M19 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC1.89□□□□□ -2.11
LINC00477Q96M19 IFNA11P-201ENST00000446352 526 ntBASIC1.89□□□□□ -2.11
LINC00477Q96M19 MTND1P9-201ENST00000453775 944 ntBASIC1.89□□□□□ -2.11
LINC00477Q96M19 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.89□□□□□ -2.11
LINC00477Q96M19 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.89□□□□□ -2.11
LINC00477Q96M19 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC1.89□□□□□ -2.11
LINC00477Q96M19 AL122001.1-201ENST00000457027 370 ntBASIC1.89□□□□□ -2.11
LINC00477Q96M19 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.89□□□□□ -2.11
LINC00477Q96M19 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
LINC00477Q96M19 AC112204.1-201ENST00000502591 103 ntBASIC1.89□□□□□ -2.11
LINC00477Q96M19 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.89□□□□□ -2.11
LINC00477Q96M19 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.89□□□□□ -2.11
LINC00477Q96M19 SCARNA24.1-201ENST00000516465 137 ntBASIC1.89□□□□□ -2.11
LINC00477Q96M19 AP003467.2-201ENST00000520175 319 ntBASIC1.89□□□□□ -2.11
LINC00477Q96M19 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.89□□□□□ -2.11
LINC00477Q96M19 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.89□□□□□ -2.11
LINC00477Q96M19 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.89□□□□□ -2.11
LINC00477Q96M19 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
LINC00477Q96M19 AC243972.3-201ENST00000539655 198 ntBASIC1.89□□□□□ -2.11
LINC00477Q96M19 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.89□□□□□ -2.11
LINC00477Q96M19 AC124947.2-202ENST00000552735 133 ntBASIC1.89□□□□□ -2.11
LINC00477Q96M19 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.89□□□□□ -2.11
LINC00477Q96M19 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.89□□□□□ -2.11
LINC00477Q96M19 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC1.89□□□□□ -2.11
LINC00477Q96M19 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.89□□□□□ -2.11
LINC00477Q96M19 AC006362.1-201ENST00000567392 174 ntBASIC1.89□□□□□ -2.11
LINC00477Q96M19 AC005771.1-201ENST00000585581 349 ntBASIC1.89□□□□□ -2.11
LINC00477Q96M19 KC877982.1-201ENST00000602313 470 ntBASIC1.89□□□□□ -2.11
LINC00477Q96M19 AC136601.2-201ENST00000604356 474 ntBASIC1.89□□□□□ -2.11
LINC00477Q96M19 AC136475.10-201ENST00000620253 385 ntBASIC1.89□□□□□ -2.11
LINC00477Q96M19 AL390237.1-201ENST00000404226 1415 ntBASIC1.89□□□□□ -2.11
LINC00477Q96M19 AC007785.2-201ENST00000598627 1916 ntBASIC1.89□□□□□ -2.11
LINC00477Q96M19 AC010329.5-201ENST00000623497 2174 ntBASIC1.89□□□□□ -2.11
LINC00477Q96M19 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.88□□□□□ -2.11
LINC00477Q96M19 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.88□□□□□ -2.11
LINC00477Q96M19 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
LINC00477Q96M19 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
LINC00477Q96M19 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.88□□□□□ -2.11
LINC00477Q96M19 FTLP6-201ENST00000355274 422 ntBASIC1.88□□□□□ -2.11
LINC00477Q96M19 RNU6-512P-201ENST00000364438 103 ntBASIC1.88□□□□□ -2.11
LINC00477Q96M19 RNU6-282P-201ENST00000365357 103 ntBASIC1.88□□□□□ -2.11
LINC00477Q96M19 Y_RNA.553-201ENST00000384670 102 ntBASIC1.88□□□□□ -2.11
LINC00477Q96M19 SNORA41-201ENST00000384675 132 ntBASIC1.88□□□□□ -2.11
LINC00477Q96M19 DEFB108C-201ENST00000400154 252 ntBASIC1.88□□□□□ -2.11
LINC00477Q96M19 AC006366.1-201ENST00000422002 759 ntBASIC1.88□□□□□ -2.11
LINC00477Q96M19 AC007560.1-201ENST00000426912 237 ntBASIC1.88□□□□□ -2.11
LINC00477Q96M19 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.88□□□□□ -2.11
LINC00477Q96M19 RPL23AP30-201ENST00000432419 501 ntBASIC1.88□□□□□ -2.11
LINC00477Q96M19 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.88□□□□□ -2.11
LINC00477Q96M19 AL512844.2-201ENST00000433990 593 ntBASIC1.88□□□□□ -2.11
LINC00477Q96M19 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.88□□□□□ -2.11
LINC00477Q96M19 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.88□□□□□ -2.11
LINC00477Q96M19 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.88□□□□□ -2.11
LINC00477Q96M19 RPS20P20-201ENST00000460498 340 ntBASIC1.88□□□□□ -2.11
LINC00477Q96M19 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.88□□□□□ -2.11
LINC00477Q96M19 AC139453.3-201ENST00000493276 369 ntBASIC1.88□□□□□ -2.11
LINC00477Q96M19 SUMO2P6-201ENST00000505273 288 ntBASIC1.88□□□□□ -2.11
LINC00477Q96M19 AC010424.1-201ENST00000506336 297 ntBASIC1.88□□□□□ -2.11
LINC00477Q96M19 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.88□□□□□ -2.11
LINC00477Q96M19 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC1.88□□□□□ -2.11
LINC00477Q96M19 SNORA31.3-201ENST00000516029 96 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms