Protein–RNA interactions for Protein: Q96JN2

CCDC136, Coiled-coil domain-containing protein 136, humanhuman

Predictions only

Length 1,154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136Q96JN2 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.91□□□□□ -1.78
CCDC136Q96JN2 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC136Q96JN2 BPY2DP-201ENST00000422208 265 ntBASIC3.91□□□□□ -1.78
CCDC136Q96JN2 AL159987.2-201ENST00000432754 307 ntBASIC3.91□□□□□ -1.78
CCDC136Q96JN2 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC136Q96JN2 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC136Q96JN2 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.91□□□□□ -1.78
CCDC136Q96JN2 RPL37P4-201ENST00000448908 268 ntBASIC3.91□□□□□ -1.78
CCDC136Q96JN2 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
CCDC136Q96JN2 AC104806.1-201ENST00000508720 308 ntBASIC3.91□□□□□ -1.78
CCDC136Q96JN2 AC010493.1-201ENST00000513479 292 ntBASIC3.91□□□□□ -1.78
CCDC136Q96JN2 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.91□□□□□ -1.78
CCDC136Q96JN2 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.91□□□□□ -1.78
CCDC136Q96JN2 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC136Q96JN2 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC136Q96JN2 AC007684.1-201ENST00000609671 477 ntBASIC3.91□□□□□ -1.78
CCDC136Q96JN2 AC011155.2-201ENST00000623202 216 ntBASIC3.91□□□□□ -1.78
CCDC136Q96JN2 U6.99-201ENST00000637524 83 ntBASIC3.91□□□□□ -1.78
CCDC136Q96JN2 NACAP2-201ENST00000318548 624 ntBASIC3.9□□□□□ -1.79
CCDC136Q96JN2 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.9□□□□□ -1.79
CCDC136Q96JN2 Y_RNA.381-201ENST00000365666 102 ntBASIC3.9□□□□□ -1.79
CCDC136Q96JN2 Y_RNA.517-201ENST00000384551 106 ntBASIC3.9□□□□□ -1.79
CCDC136Q96JN2 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC136Q96JN2 USP9YP6-201ENST00000413550 854 ntBASIC3.9□□□□□ -1.79
CCDC136Q96JN2 AL353678.1-201ENST00000422735 741 ntBASIC3.9□□□□□ -1.79
CCDC136Q96JN2 MTCO2P19-201ENST00000427513 598 ntBASIC3.9□□□□□ -1.79
CCDC136Q96JN2 AC002486.1-201ENST00000435098 391 ntBASIC3.9□□□□□ -1.79
CCDC136Q96JN2 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.9□□□□□ -1.79
CCDC136Q96JN2 AL590639.1-201ENST00000456484 337 ntBASIC3.9□□□□□ -1.79
CCDC136Q96JN2 RPS3AP14-201ENST00000483907 780 ntBASIC3.9□□□□□ -1.79
CCDC136Q96JN2 AC098591.2-201ENST00000510152 315 ntBASIC3.9□□□□□ -1.79
CCDC136Q96JN2 RNU6-703P-201ENST00000516946 107 ntBASIC3.9□□□□□ -1.79
CCDC136Q96JN2 AC022634.1-201ENST00000520765 532 ntBASIC3.9□□□□□ -1.79
CCDC136Q96JN2 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC136Q96JN2 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.9□□□□□ -1.79
CCDC136Q96JN2 AC010620.2-201ENST00000600135 313 ntBASIC3.9□□□□□ -1.79
CCDC136Q96JN2 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC136Q96JN2 AL355365.1-201ENST00000616480 294 ntBASIC3.9□□□□□ -1.79
CCDC136Q96JN2 AC012314.7-201ENST00000619693 93 ntBASIC3.9□□□□□ -1.79
CCDC136Q96JN2 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC136Q96JN2 U6.114-201ENST00000636407 96 ntBASIC3.9□□□□□ -1.79
CCDC136Q96JN2 MTND5P17-201ENST00000418405 1603 ntBASIC3.9□□□□□ -1.79
CCDC136Q96JN2 AL049781.1-201ENST00000623195 3585 ntBASIC3.9□□□□□ -1.79
CCDC136Q96JN2 ELF2P3-201ENST00000445099 1506 ntBASIC3.9□□□□□ -1.79
CCDC136Q96JN2 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
CCDC136Q96JN2 AC026241.1-201ENST00000517873 2142 ntBASIC3.89□□□□□ -1.79
CCDC136Q96JN2 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC136Q96JN2 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC136Q96JN2 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC136Q96JN2 RNU6-623P-201ENST00000363143 105 ntBASIC3.89□□□□□ -1.79
CCDC136Q96JN2 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
CCDC136Q96JN2 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC136Q96JN2 RNU4-55P-201ENST00000410731 137 ntBASIC3.89□□□□□ -1.79
CCDC136Q96JN2 HMGN2P35-201ENST00000412164 270 ntBASIC3.89□□□□□ -1.79
CCDC136Q96JN2 NDUFS5P4-201ENST00000412983 318 ntBASIC3.89□□□□□ -1.79
CCDC136Q96JN2 MTCO3P41-201ENST00000414801 328 ntBASIC3.89□□□□□ -1.79
CCDC136Q96JN2 RPL7P37-201ENST00000425095 738 ntBASIC3.89□□□□□ -1.79
CCDC136Q96JN2 CALM2P2-201ENST00000428512 440 ntBASIC3.89□□□□□ -1.79
CCDC136Q96JN2 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC136Q96JN2 AC011825.1-201ENST00000484967 388 ntBASIC3.89□□□□□ -1.79
CCDC136Q96JN2 AC079382.1-201ENST00000493346 557 ntBASIC3.89□□□□□ -1.79
CCDC136Q96JN2 HMGB1P29-201ENST00000505659 499 ntBASIC3.89□□□□□ -1.79
CCDC136Q96JN2 RNU6-572P-201ENST00000516724 80 ntBASIC3.89□□□□□ -1.79
CCDC136Q96JN2 SNORA31.19-201ENST00000517079 126 ntBASIC3.89□□□□□ -1.79
CCDC136Q96JN2 RANP3-201ENST00000530970 276 ntBASIC3.89□□□□□ -1.79
CCDC136Q96JN2 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC136Q96JN2 MIR4775-201ENST00000581168 75 ntBASIC3.89□□□□□ -1.79
CCDC136Q96JN2 AC004223.2-201ENST00000590309 544 ntBASIC3.89□□□□□ -1.79
CCDC136Q96JN2 AC008739.2-201ENST00000597006 317 ntBASIC3.89□□□□□ -1.79
CCDC136Q96JN2 AC078795.2-201ENST00000602835 1252 ntBASIC3.89□□□□□ -1.79
CCDC136Q96JN2 AC008536.2-201ENST00000607284 349 ntBASIC3.89□□□□□ -1.79
CCDC136Q96JN2 AC069200.1-201ENST00000609511 323 ntBASIC3.89□□□□□ -1.79
CCDC136Q96JN2 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC136Q96JN2 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC136Q96JN2 ZNF680P1-201ENST00000436625 1469 ntBASIC3.89□□□□□ -1.79
CCDC136Q96JN2 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC136Q96JN2 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.89□□□□□ -1.79
CCDC136Q96JN2 AC093010.3-201ENST00000570269 15214 ntBASIC3.89□□□□□ -1.79
CCDC136Q96JN2 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC136Q96JN2 HSPA8P4-201ENST00000511877 1920 ntBASIC3.88□□□□□ -1.79
CCDC136Q96JN2 Y_RNA.1-201ENST00000352915 104 ntBASIC3.88□□□□□ -1.79
CCDC136Q96JN2 Y_RNA.41-201ENST00000362646 102 ntBASIC3.88□□□□□ -1.79
CCDC136Q96JN2 SNORD56.5-201ENST00000364281 72 ntBASIC3.88□□□□□ -1.79
CCDC136Q96JN2 RNU4-48P-201ENST00000365559 182 ntBASIC3.88□□□□□ -1.79
CCDC136Q96JN2 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
CCDC136Q96JN2 RNU1-109P-201ENST00000383960 147 ntBASIC3.88□□□□□ -1.79
CCDC136Q96JN2 RNU6-116P-201ENST00000384042 109 ntBASIC3.88□□□□□ -1.79
CCDC136Q96JN2 RNU6-1029P-201ENST00000384109 107 ntBASIC3.88□□□□□ -1.79
CCDC136Q96JN2 RPL21P75-201ENST00000396599 483 ntBASIC3.88□□□□□ -1.79
CCDC136Q96JN2 RPL21P28-201ENST00000401418 483 ntBASIC3.88□□□□□ -1.79
CCDC136Q96JN2 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.88□□□□□ -1.79
CCDC136Q96JN2 AL592114.1-201ENST00000403842 483 ntBASIC3.88□□□□□ -1.79
CCDC136Q96JN2 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC136Q96JN2 AL353193.1-201ENST00000421444 268 ntBASIC3.88□□□□□ -1.79
CCDC136Q96JN2 AC097713.2-201ENST00000430199 356 ntBASIC3.88□□□□□ -1.79
CCDC136Q96JN2 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.88□□□□□ -1.79
CCDC136Q96JN2 DPPA3P1-201ENST00000448050 469 ntBASIC3.88□□□□□ -1.79
CCDC136Q96JN2 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.88□□□□□ -1.79
CCDC136Q96JN2 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC136Q96JN2 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms