Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 AC092608.2-201ENST00000624427 218 ntBASIC4.39□□□□□ -1.71
DDX1Q92499 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
DDX1Q92499 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
DDX1Q92499 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
DDX1Q92499 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
DDX1Q92499 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
DDX1Q92499 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.38□□□□□ -1.71
DDX1Q92499 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
DDX1Q92499 ZNF962P-201ENST00000443465 3140 ntBASIC4.38□□□□□ -1.71
DDX1Q92499 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
DDX1Q92499 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
DDX1Q92499 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
DDX1Q92499 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
DDX1Q92499 SNORD74.4-201ENST00000364129 80 ntBASIC4.38□□□□□ -1.71
DDX1Q92499 RNU6-266P-201ENST00000364225 107 ntBASIC4.38□□□□□ -1.71
DDX1Q92499 Y_RNA.404-201ENST00000383978 102 ntBASIC4.38□□□□□ -1.71
DDX1Q92499 RNU6-209P-201ENST00000384118 107 ntBASIC4.38□□□□□ -1.71
DDX1Q92499 AC092809.3-201ENST00000415453 231 ntBASIC4.38□□□□□ -1.71
DDX1Q92499 BX842559.1-201ENST00000419615 532 ntBASIC4.38□□□□□ -1.71
DDX1Q92499 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.38□□□□□ -1.71
DDX1Q92499 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.38□□□□□ -1.71
DDX1Q92499 AL590383.1-201ENST00000428602 75 ntBASIC4.38□□□□□ -1.71
DDX1Q92499 AL591704.1-201ENST00000432574 275 ntBASIC4.38□□□□□ -1.71
DDX1Q92499 AC004801.2-202ENST00000463559 283 ntBASIC4.38□□□□□ -1.71
DDX1Q92499 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.38□□□□□ -1.71
DDX1Q92499 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
DDX1Q92499 HIGD1AP13-201ENST00000509878 289 ntBASIC4.38□□□□□ -1.71
DDX1Q92499 RNU6-408P-201ENST00000515910 100 ntBASIC4.38□□□□□ -1.71
DDX1Q92499 RNU2-58P-201ENST00000516403 183 ntBASIC4.38□□□□□ -1.71
DDX1Q92499 RNU6-143P-201ENST00000516942 93 ntBASIC4.38□□□□□ -1.71
DDX1Q92499 ATP5F1P5-201ENST00000526403 760 ntBASIC4.38□□□□□ -1.71
DDX1Q92499 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.38□□□□□ -1.71
DDX1Q92499 OR5D17P-201ENST00000531492 978 ntBASIC4.38□□□□□ -1.71
DDX1Q92499 AC135001.1-201ENST00000544546 283 ntBASIC4.38□□□□□ -1.71
DDX1Q92499 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.38□□□□□ -1.71
DDX1Q92499 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.38□□□□□ -1.71
DDX1Q92499 RN7SL600P-201ENST00000581811 299 ntBASIC4.38□□□□□ -1.71
DDX1Q92499 AC092747.3-201ENST00000603769 301 ntBASIC4.38□□□□□ -1.71
DDX1Q92499 AL355365.1-201ENST00000616480 294 ntBASIC4.38□□□□□ -1.71
DDX1Q92499 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.38□□□□□ -1.71
DDX1Q92499 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
DDX1Q92499 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
DDX1Q92499 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
DDX1Q92499 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.38□□□□□ -1.71
DDX1Q92499 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.38□□□□□ -1.71
DDX1Q92499 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
DDX1Q92499 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
DDX1Q92499 AC016588.2-201ENST00000632484 3021 ntBASIC4.38□□□□□ -1.71
DDX1Q92499 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.37□□□□□ -1.71
DDX1Q92499 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
DDX1Q92499 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
DDX1Q92499 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
DDX1Q92499 AC116096.1-201ENST00000566804 2314 ntBASIC4.37□□□□□ -1.71
DDX1Q92499 RNU1-115P-201ENST00000365329 160 ntBASIC4.37□□□□□ -1.71
DDX1Q92499 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
DDX1Q92499 RNU6-1062P-201ENST00000383908 107 ntBASIC4.37□□□□□ -1.71
DDX1Q92499 Y_RNA.447-201ENST00000384184 113 ntBASIC4.37□□□□□ -1.71
DDX1Q92499 Y_RNA.489-201ENST00000384410 101 ntBASIC4.37□□□□□ -1.71
DDX1Q92499 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.37□□□□□ -1.71
DDX1Q92499 RNA5SP306-201ENST00000411087 107 ntBASIC4.37□□□□□ -1.71
DDX1Q92499 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.37□□□□□ -1.71
DDX1Q92499 NDUFB4P7-201ENST00000423198 363 ntBASIC4.37□□□□□ -1.71
DDX1Q92499 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.37□□□□□ -1.71
DDX1Q92499 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.37□□□□□ -1.71
DDX1Q92499 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.37□□□□□ -1.71
DDX1Q92499 RPL23AP46-201ENST00000438548 490 ntBASIC4.37□□□□□ -1.71
DDX1Q92499 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.37□□□□□ -1.71
DDX1Q92499 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC4.37□□□□□ -1.71
DDX1Q92499 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.37□□□□□ -1.71
DDX1Q92499 AC010469.1-201ENST00000463864 576 ntBASIC4.37□□□□□ -1.71
DDX1Q92499 RPS15AP34-201ENST00000487776 387 ntBASIC4.37□□□□□ -1.71
DDX1Q92499 FTH1P9-201ENST00000513251 355 ntBASIC4.37□□□□□ -1.71
DDX1Q92499 SNORA70.16-201ENST00000516390 95 ntBASIC4.37□□□□□ -1.71
DDX1Q92499 SNORA74D-201ENST00000516404 141 ntBASIC4.37□□□□□ -1.71
DDX1Q92499 RNU6-1016P-201ENST00000516689 94 ntBASIC4.37□□□□□ -1.71
DDX1Q92499 RNU6-699P-201ENST00000517081 110 ntBASIC4.37□□□□□ -1.71
DDX1Q92499 IGKV2-38-201ENST00000517443 247 ntBASIC4.37□□□□□ -1.71
DDX1Q92499 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.37□□□□□ -1.71
DDX1Q92499 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.37□□□□□ -1.71
DDX1Q92499 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC4.37□□□□□ -1.71
DDX1Q92499 RPL23AP87-202ENST00000573039 466 ntBASIC4.37□□□□□ -1.71
DDX1Q92499 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.37□□□□□ -1.71
DDX1Q92499 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.37□□□□□ -1.71
DDX1Q92499 AC100812.1-201ENST00000607622 580 ntBASIC4.37□□□□□ -1.71
DDX1Q92499 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.37□□□□□ -1.71
DDX1Q92499 AC019176.2-201ENST00000611579 315 ntBASIC4.37□□□□□ -1.71
DDX1Q92499 DUSP12P1-201ENST00000612874 516 ntBASIC4.37□□□□□ -1.71
DDX1Q92499 AC011890.2-201ENST00000613393 294 ntBASIC4.37□□□□□ -1.71
DDX1Q92499 DLEU2_5.1-201ENST00000615567 84 ntBASIC4.37□□□□□ -1.71
DDX1Q92499 U2.1-201ENST00000618978 145 ntBASIC4.37□□□□□ -1.71
DDX1Q92499 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
DDX1Q92499 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
DDX1Q92499 CDC27P3-201ENST00000635418 1910 ntBASIC4.36□□□□□ -1.71
DDX1Q92499 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.36□□□□□ -1.71
DDX1Q92499 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
DDX1Q92499 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.36□□□□□ -1.71
DDX1Q92499 RNU6-490P-201ENST00000362985 107 ntBASIC4.36□□□□□ -1.71
DDX1Q92499 RNU6-99P-201ENST00000364721 107 ntBASIC4.36□□□□□ -1.71
DDX1Q92499 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
DDX1Q92499 AL391417.1-201ENST00000404100 426 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms