Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 U8.22-201ENST00000459141 133 ntBASIC5.12□□□□□ -1.59
NEDD1Q8NHV4 RPL37P6-202ENST00000464216 403 ntBASIC5.12□□□□□ -1.59
NEDD1Q8NHV4 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.12□□□□□ -1.59
NEDD1Q8NHV4 AC104057.1-201ENST00000515547 497 ntBASIC5.12□□□□□ -1.59
NEDD1Q8NHV4 SNORD116-25-201ENST00000516517 92 ntBASIC5.12□□□□□ -1.59
NEDD1Q8NHV4 RNU6-1012P-201ENST00000516606 109 ntBASIC5.12□□□□□ -1.59
NEDD1Q8NHV4 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.12□□□□□ -1.59
NEDD1Q8NHV4 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
NEDD1Q8NHV4 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.12□□□□□ -1.59
NEDD1Q8NHV4 AC006077.1-201ENST00000604746 343 ntBASIC5.12□□□□□ -1.59
NEDD1Q8NHV4 AL021997.2-201ENST00000615674 271 ntBASIC5.12□□□□□ -1.59
NEDD1Q8NHV4 AL023881.1-201ENST00000621088 301 ntBASIC5.12□□□□□ -1.59
NEDD1Q8NHV4 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
NEDD1Q8NHV4 AC005086.4-201ENST00000623065 213 ntBASIC5.12□□□□□ -1.59
NEDD1Q8NHV4 PHKBP1-201ENST00000450951 1951 ntBASIC5.12□□□□□ -1.59
NEDD1Q8NHV4 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NEDD1Q8NHV4 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
NEDD1Q8NHV4 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NEDD1Q8NHV4 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NEDD1Q8NHV4 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.12□□□□□ -1.59
NEDD1Q8NHV4 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NEDD1Q8NHV4 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NEDD1Q8NHV4 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.11□□□□□ -1.59
NEDD1Q8NHV4 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
NEDD1Q8NHV4 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
NEDD1Q8NHV4 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
NEDD1Q8NHV4 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.11□□□□□ -1.59
NEDD1Q8NHV4 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
NEDD1Q8NHV4 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
NEDD1Q8NHV4 RN7SKP224-201ENST00000364140 325 ntBASIC5.11□□□□□ -1.59
NEDD1Q8NHV4 Y_RNA.308-201ENST00000365043 101 ntBASIC5.11□□□□□ -1.59
NEDD1Q8NHV4 RNU6-449P-201ENST00000383914 107 ntBASIC5.11□□□□□ -1.59
NEDD1Q8NHV4 RNU6-1293P-201ENST00000384077 107 ntBASIC5.11□□□□□ -1.59
NEDD1Q8NHV4 RNU6-14P-201ENST00000384630 106 ntBASIC5.11□□□□□ -1.59
NEDD1Q8NHV4 MIR1271-201ENST00000408537 86 ntBASIC5.11□□□□□ -1.59
NEDD1Q8NHV4 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.11□□□□□ -1.59
NEDD1Q8NHV4 TBCAP1-201ENST00000436520 327 ntBASIC5.11□□□□□ -1.59
NEDD1Q8NHV4 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.11□□□□□ -1.59
NEDD1Q8NHV4 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.11□□□□□ -1.59
NEDD1Q8NHV4 AC009963.2-201ENST00000453431 138 ntBASIC5.11□□□□□ -1.59
NEDD1Q8NHV4 RPL21P41-201ENST00000459863 264 ntBASIC5.11□□□□□ -1.59
NEDD1Q8NHV4 RPL35AP15-201ENST00000468042 339 ntBASIC5.11□□□□□ -1.59
NEDD1Q8NHV4 UQCRHP4-201ENST00000471686 272 ntBASIC5.11□□□□□ -1.59
NEDD1Q8NHV4 RPL30P1-201ENST00000488676 339 ntBASIC5.11□□□□□ -1.59
NEDD1Q8NHV4 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.11□□□□□ -1.59
NEDD1Q8NHV4 MTND3P25-201ENST00000509243 135 ntBASIC5.11□□□□□ -1.59
NEDD1Q8NHV4 AC016065.2-201ENST00000514530 444 ntBASIC5.11□□□□□ -1.59
NEDD1Q8NHV4 AP003730.1-201ENST00000524605 285 ntBASIC5.11□□□□□ -1.59
NEDD1Q8NHV4 MIR4504-201ENST00000577413 92 ntBASIC5.11□□□□□ -1.59
NEDD1Q8NHV4 AC011476.5-201ENST00000615594 130 ntBASIC5.11□□□□□ -1.59
NEDD1Q8NHV4 RNU6-156P-201ENST00000621869 107 ntBASIC5.11□□□□□ -1.59
NEDD1Q8NHV4 AL031601.2-202ENST00000622650 282 ntBASIC5.11□□□□□ -1.59
NEDD1Q8NHV4 CR392039.4-201ENST00000624968 501 ntBASIC5.11□□□□□ -1.59
NEDD1Q8NHV4 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
NEDD1Q8NHV4 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
NEDD1Q8NHV4 MTND5P9-201ENST00000503854 1755 ntBASIC5.11□□□□□ -1.59
NEDD1Q8NHV4 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.11□□□□□ -1.59
NEDD1Q8NHV4 AC116667.1-201ENST00000604855 2072 ntBASIC5.11□□□□□ -1.59
NEDD1Q8NHV4 AC093535.2-201ENST00000624769 2326 ntBASIC5.11□□□□□ -1.59
NEDD1Q8NHV4 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
NEDD1Q8NHV4 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
NEDD1Q8NHV4 Y_RNA.71-201ENST00000362892 104 ntBASIC5.1□□□□□ -1.59
NEDD1Q8NHV4 RNA5SP175-201ENST00000364275 119 ntBASIC5.1□□□□□ -1.59
NEDD1Q8NHV4 SNORD96B-201ENST00000386148 79 ntBASIC5.1□□□□□ -1.59
NEDD1Q8NHV4 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
NEDD1Q8NHV4 AL590704.1-201ENST00000402856 794 ntBASIC5.1□□□□□ -1.59
NEDD1Q8NHV4 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC5.1□□□□□ -1.59
NEDD1Q8NHV4 AL157831.1-201ENST00000426134 473 ntBASIC5.1□□□□□ -1.59
NEDD1Q8NHV4 AC010631.1-201ENST00000474150 156 ntBASIC5.1□□□□□ -1.59
NEDD1Q8NHV4 AC105137.1-201ENST00000484355 562 ntBASIC5.1□□□□□ -1.59
NEDD1Q8NHV4 AC108022.1-201ENST00000493466 478 ntBASIC5.1□□□□□ -1.59
NEDD1Q8NHV4 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NEDD1Q8NHV4 Y_RNA.679-201ENST00000516416 91 ntBASIC5.1□□□□□ -1.59
NEDD1Q8NHV4 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.1□□□□□ -1.59
NEDD1Q8NHV4 AC090151.1-201ENST00000520784 730 ntBASIC5.1□□□□□ -1.59
NEDD1Q8NHV4 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.1□□□□□ -1.59
NEDD1Q8NHV4 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC5.1□□□□□ -1.59
NEDD1Q8NHV4 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.1□□□□□ -1.59
NEDD1Q8NHV4 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NEDD1Q8NHV4 IPO5P1-202ENST00000600039 287 ntBASIC5.1□□□□□ -1.59
NEDD1Q8NHV4 ARF4P1-201ENST00000605447 541 ntBASIC5.1□□□□□ -1.59
NEDD1Q8NHV4 AC110801.1-201ENST00000623590 212 ntBASIC5.1□□□□□ -1.59
NEDD1Q8NHV4 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.1□□□□□ -1.59
NEDD1Q8NHV4 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NEDD1Q8NHV4 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
NEDD1Q8NHV4 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
NEDD1Q8NHV4 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NEDD1Q8NHV4 AL451142.2-201ENST00000429076 2090 ntBASIC5.09□□□□□ -1.59
NEDD1Q8NHV4 MAPK10-303ENST00000641324 3959 ntBASIC5.09□□□□□ -1.59
NEDD1Q8NHV4 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.09□□□□□ -1.59
NEDD1Q8NHV4 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.09□□□□□ -1.59
NEDD1Q8NHV4 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.09□□□□□ -1.59
NEDD1Q8NHV4 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NEDD1Q8NHV4 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NEDD1Q8NHV4 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NEDD1Q8NHV4 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.59
NEDD1Q8NHV4 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.09□□□□□ -1.59
NEDD1Q8NHV4 RNU1-44P-201ENST00000384453 163 ntBASIC5.09□□□□□ -1.59
NEDD1Q8NHV4 RN7SKP167-201ENST00000411047 285 ntBASIC5.09□□□□□ -1.59
NEDD1Q8NHV4 CYCSP33-201ENST00000414485 327 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms