Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
USP48Q86UV5 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.8□□□□□ -1.64
USP48Q86UV5 SKA2P1-201ENST00000425592 390 ntBASIC4.8□□□□□ -1.64
USP48Q86UV5 AL358472.1-201ENST00000431295 329 ntBASIC4.8□□□□□ -1.64
USP48Q86UV5 RPS24P13-201ENST00000442520 397 ntBASIC4.8□□□□□ -1.64
USP48Q86UV5 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.8□□□□□ -1.64
USP48Q86UV5 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC4.8□□□□□ -1.64
USP48Q86UV5 AC104472.2-201ENST00000469035 601 ntBASIC4.8□□□□□ -1.64
USP48Q86UV5 RN7SL293P-201ENST00000481765 281 ntBASIC4.8□□□□□ -1.64
USP48Q86UV5 RPL29P14-201ENST00000495837 428 ntBASIC4.8□□□□□ -1.64
USP48Q86UV5 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.8□□□□□ -1.64
USP48Q86UV5 AC008716.1-201ENST00000511084 513 ntBASIC4.8□□□□□ -1.64
USP48Q86UV5 RNA5SP291-201ENST00000517222 105 ntBASIC4.8□□□□□ -1.64
USP48Q86UV5 AC069113.1-201ENST00000517763 267 ntBASIC4.8□□□□□ -1.64
USP48Q86UV5 APOOP3-201ENST00000536787 586 ntBASIC4.8□□□□□ -1.64
USP48Q86UV5 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.8□□□□□ -1.64
USP48Q86UV5 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.8□□□□□ -1.64
USP48Q86UV5 AL360157.1-201ENST00000565962 87 ntBASIC4.8□□□□□ -1.64
USP48Q86UV5 AC025627.2-201ENST00000576220 160 ntBASIC4.8□□□□□ -1.64
USP48Q86UV5 MIR1273C-201ENST00000578669 77 ntBASIC4.8□□□□□ -1.64
USP48Q86UV5 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
USP48Q86UV5 AC008737.2-201ENST00000599446 118 ntBASIC4.8□□□□□ -1.64
USP48Q86UV5 AC080078.3-201ENST00000605407 463 ntBASIC4.8□□□□□ -1.64
USP48Q86UV5 AC002044.1-201ENST00000606707 158 ntBASIC4.8□□□□□ -1.64
USP48Q86UV5 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.8□□□□□ -1.64
USP48Q86UV5 AC090132.2-201ENST00000615881 347 ntBASIC4.8□□□□□ -1.64
USP48Q86UV5 AL773545.4-201ENST00000637262 310 ntBASIC4.8□□□□□ -1.64
USP48Q86UV5 AL513478.4-201ENST00000641636 310 ntBASIC4.8□□□□□ -1.64
USP48Q86UV5 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.8□□□□□ -1.64
USP48Q86UV5 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.8□□□□□ -1.64
USP48Q86UV5 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
USP48Q86UV5 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
USP48Q86UV5 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.79□□□□□ -1.64
USP48Q86UV5 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.79□□□□□ -1.64
USP48Q86UV5 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.79□□□□□ -1.64
USP48Q86UV5 RNU6-600P-201ENST00000362524 99 ntBASIC4.79□□□□□ -1.64
USP48Q86UV5 RNU6-1303P-201ENST00000364841 107 ntBASIC4.79□□□□□ -1.64
USP48Q86UV5 SNORA22B-201ENST00000383876 138 ntBASIC4.79□□□□□ -1.64
USP48Q86UV5 RNU6-741P-201ENST00000383889 107 ntBASIC4.79□□□□□ -1.64
USP48Q86UV5 SNORA3.3-201ENST00000408712 125 ntBASIC4.79□□□□□ -1.64
USP48Q86UV5 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC4.79□□□□□ -1.64
USP48Q86UV5 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.79□□□□□ -1.64
USP48Q86UV5 PMCHL1-202ENST00000423102 261 ntBASIC4.79□□□□□ -1.64
USP48Q86UV5 AP000907.1-201ENST00000428428 510 ntBASIC4.79□□□□□ -1.64
USP48Q86UV5 AL359672.1-201ENST00000442302 409 ntBASIC4.79□□□□□ -1.64
USP48Q86UV5 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.79□□□□□ -1.64
USP48Q86UV5 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.79□□□□□ -1.64
USP48Q86UV5 AP000926.1-201ENST00000479573 241 ntBASIC4.79□□□□□ -1.64
USP48Q86UV5 AC026801.1-201ENST00000497178 464 ntBASIC4.79□□□□□ -1.64
USP48Q86UV5 SRP72-202ENST00000504757 745 ntTSL 2 BASIC4.79□□□□□ -1.64
USP48Q86UV5 MTND3P25-201ENST00000509243 135 ntBASIC4.79□□□□□ -1.64
USP48Q86UV5 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC4.79□□□□□ -1.64
USP48Q86UV5 RNA5SP179-201ENST00000517284 121 ntBASIC4.79□□□□□ -1.64
USP48Q86UV5 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.79□□□□□ -1.64
USP48Q86UV5 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.79□□□□□ -1.64
USP48Q86UV5 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.79□□□□□ -1.64
USP48Q86UV5 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.79□□□□□ -1.64
USP48Q86UV5 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.79□□□□□ -1.64
USP48Q86UV5 AL157871.3-201ENST00000557231 293 ntBASIC4.79□□□□□ -1.64
USP48Q86UV5 AC087499.8-201ENST00000578406 226 ntBASIC4.79□□□□□ -1.64
USP48Q86UV5 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.79□□□□□ -1.64
USP48Q86UV5 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC4.79□□□□□ -1.64
USP48Q86UV5 AC010378.1-201ENST00000619270 362 ntBASIC4.79□□□□□ -1.64
USP48Q86UV5 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.79□□□□□ -1.64
USP48Q86UV5 AL031601.2-202ENST00000622650 282 ntBASIC4.79□□□□□ -1.64
USP48Q86UV5 TTK-211ENST00000627129 240 ntTSL 5 BASIC4.79□□□□□ -1.64
USP48Q86UV5 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
USP48Q86UV5 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.79□□□□□ -1.64
USP48Q86UV5 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP48Q86UV5 AC008568.2-201ENST00000623862 2313 ntBASIC4.79□□□□□ -1.64
USP48Q86UV5 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.79□□□□□ -1.64
USP48Q86UV5 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
USP48Q86UV5 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
USP48Q86UV5 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.78□□□□□ -1.64
USP48Q86UV5 USP8P1-201ENST00000494673 3183 ntBASIC4.78□□□□□ -1.64
USP48Q86UV5 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.78□□□□□ -1.64
USP48Q86UV5 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
USP48Q86UV5 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.78□□□□□ -1.64
USP48Q86UV5 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.78□□□□□ -1.64
USP48Q86UV5 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.78□□□□□ -1.64
USP48Q86UV5 Y_RNA.133-201ENST00000363428 110 ntBASIC4.78□□□□□ -1.64
USP48Q86UV5 Y_RNA.245-201ENST00000364493 95 ntBASIC4.78□□□□□ -1.64
USP48Q86UV5 RNU6-593P-201ENST00000364716 112 ntBASIC4.78□□□□□ -1.64
USP48Q86UV5 RNU6-395P-201ENST00000365662 106 ntBASIC4.78□□□□□ -1.64
USP48Q86UV5 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
USP48Q86UV5 RNU6-214P-201ENST00000384130 107 ntBASIC4.78□□□□□ -1.64
USP48Q86UV5 RNU6-601P-201ENST00000384540 107 ntBASIC4.78□□□□□ -1.64
USP48Q86UV5 AL391417.1-201ENST00000404100 426 ntBASIC4.78□□□□□ -1.64
USP48Q86UV5 RNU2-33P-201ENST00000410344 192 ntBASIC4.78□□□□□ -1.64
USP48Q86UV5 AL035423.1-201ENST00000420331 213 ntBASIC4.78□□□□□ -1.64
USP48Q86UV5 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC4.78□□□□□ -1.64
USP48Q86UV5 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.78□□□□□ -1.64
USP48Q86UV5 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.78□□□□□ -1.64
USP48Q86UV5 IPO7P1-201ENST00000442031 636 ntBASIC4.78□□□□□ -1.64
USP48Q86UV5 RPL7P42-201ENST00000481005 679 ntBASIC4.78□□□□□ -1.64
USP48Q86UV5 HMGB1P30-201ENST00000492455 606 ntBASIC4.78□□□□□ -1.64
USP48Q86UV5 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.78□□□□□ -1.64
USP48Q86UV5 AC021146.2-201ENST00000504736 556 ntBASIC4.78□□□□□ -1.64
USP48Q86UV5 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.78□□□□□ -1.64
USP48Q86UV5 AC104619.4-201ENST00000510773 249 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms