Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 DUXAP3-201ENST00000603616 594 ntBASIC0.31□□□□□ -2.36
UBR4Q5T4S7 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC0.31□□□□□ -2.36
UBR4Q5T4S7 MIR6866-201ENST00000638146 69 ntBASIC0.31□□□□□ -2.36
UBR4Q5T4S7 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
UBR4Q5T4S7 AL356432.1-201ENST00000405809 419 ntBASIC0.31□□□□□ -2.36
UBR4Q5T4S7 SNORD56-201ENST00000413522 71 ntBASIC0.31□□□□□ -2.36
UBR4Q5T4S7 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC0.31□□□□□ -2.36
UBR4Q5T4S7 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC0.31□□□□□ -2.36
UBR4Q5T4S7 NDUFB4P2-201ENST00000509515 391 ntBASIC0.31□□□□□ -2.36
UBR4Q5T4S7 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC0.31□□□□□ -2.36
UBR4Q5T4S7 AC016256.1-201ENST00000547971 354 ntBASIC0.31□□□□□ -2.36
UBR4Q5T4S7 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.31□□□□□ -2.36
UBR4Q5T4S7 MIR3681-201ENST00000580089 72 ntBASIC0.31□□□□□ -2.36
UBR4Q5T4S7 AL355802.3-201ENST00000607571 545 ntBASIC0.31□□□□□ -2.36
UBR4Q5T4S7 AC106052.1-201ENST00000608029 497 ntBASIC0.31□□□□□ -2.36
UBR4Q5T4S7 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC0.3□□□□□ -2.36
UBR4Q5T4S7 TPMTP4-201ENST00000450749 678 ntBASIC0.3□□□□□ -2.36
UBR4Q5T4S7 AC104308.1-201ENST00000454621 333 ntBASIC0.3□□□□□ -2.36
UBR4Q5T4S7 KLF3P2-201ENST00000465138 268 ntBASIC0.3□□□□□ -2.36
UBR4Q5T4S7 AC078857.1-201ENST00000469870 667 ntBASIC0.3□□□□□ -2.36
UBR4Q5T4S7 RPS27P26-201ENST00000494583 239 ntBASIC0.3□□□□□ -2.36
UBR4Q5T4S7 RNA5SP309-201ENST00000516670 106 ntBASIC0.3□□□□□ -2.36
UBR4Q5T4S7 RNU6-56P-201ENST00000516986 93 ntBASIC0.3□□□□□ -2.36
UBR4Q5T4S7 MIR4768-201ENST00000585270 74 ntBASIC0.3□□□□□ -2.36
UBR4Q5T4S7 YWHAQP7-201ENST00000603536 658 ntBASIC0.3□□□□□ -2.36
UBR4Q5T4S7 AC121334.2-201ENST00000605387 271 ntBASIC0.3□□□□□ -2.36
UBR4Q5T4S7 AL138478.1-201ENST00000612252 832 ntBASIC0.3□□□□□ -2.36
UBR4Q5T4S7 SNORA46.1-201ENST00000391069 153 ntBASIC0.3□□□□□ -2.36
UBR4Q5T4S7 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC0.3□□□□□ -2.36
UBR4Q5T4S7 MTND5P8-201ENST00000449817 1083 ntBASIC0.3□□□□□ -2.36
UBR4Q5T4S7 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC0.3□□□□□ -2.36
UBR4Q5T4S7 SNORD124-201ENST00000459577 104 ntBASIC0.3□□□□□ -2.36
UBR4Q5T4S7 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC0.3□□□□□ -2.36
UBR4Q5T4S7 LINC00933-203ENST00000559812 219 ntBASIC0.3□□□□□ -2.36
UBR4Q5T4S7 AC079597.1-201ENST00000624306 508 ntBASIC0.3□□□□□ -2.36
UBR4Q5T4S7 RNU6-146P-201ENST00000384602 108 ntBASIC0.3□□□□□ -2.36
UBR4Q5T4S7 AL035666.1-201ENST00000446195 348 ntBASIC0.3□□□□□ -2.36
UBR4Q5T4S7 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC0.3□□□□□ -2.36
UBR4Q5T4S7 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC0.3□□□□□ -2.36
UBR4Q5T4S7 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC0.3□□□□□ -2.36
UBR4Q5T4S7 AC091304.6-201ENST00000619761 202 ntBASIC0.3□□□□□ -2.36
UBR4Q5T4S7 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC0.3□□□□□ -2.36
UBR4Q5T4S7 RNU6-657P-201ENST00000383904 107 ntBASIC0.3□□□□□ -2.36
UBR4Q5T4S7 Y_RNA.566-201ENST00000384735 101 ntBASIC0.3□□□□□ -2.36
UBR4Q5T4S7 Y_RNA.630-201ENST00000411370 108 ntBASIC0.3□□□□□ -2.36
UBR4Q5T4S7 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0.3□□□□□ -2.36
UBR4Q5T4S7 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC0.3□□□□□ -2.36
UBR4Q5T4S7 RAC1P9-201ENST00000604990 392 ntBASIC0.3□□□□□ -2.36
UBR4Q5T4S7 RNU6-178P-201ENST00000384631 104 ntBASIC0.29□□□□□ -2.36
UBR4Q5T4S7 PRELID3BP1-201ENST00000457142 540 ntBASIC0.29□□□□□ -2.36
UBR4Q5T4S7 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.29□□□□□ -2.36
UBR4Q5T4S7 AC008269.2-201ENST00000561915 1105 ntBASIC0.29□□□□□ -2.36
UBR4Q5T4S7 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC0.29□□□□□ -2.36
UBR4Q5T4S7 XIST_intron.1-201ENST00000619444 68 ntBASIC0.29□□□□□ -2.36
UBR4Q5T4S7 TPT1P8-201ENST00000510120 555 ntBASIC0.29□□□□□ -2.36
UBR4Q5T4S7 AC011406.1-201ENST00000512440 370 ntBASIC0.29□□□□□ -2.36
UBR4Q5T4S7 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
UBR4Q5T4S7 AC068050.1-201ENST00000394891 380 ntBASIC0.29□□□□□ -2.36
UBR4Q5T4S7 RNU6-955P-201ENST00000410497 104 ntBASIC0.29□□□□□ -2.36
UBR4Q5T4S7 RN7SKP61-201ENST00000410642 295 ntBASIC0.29□□□□□ -2.36
UBR4Q5T4S7 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC0.29□□□□□ -2.36
UBR4Q5T4S7 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC0.29□□□□□ -2.36
UBR4Q5T4S7 SUMO2P4-201ENST00000504193 276 ntBASIC0.29□□□□□ -2.36
UBR4Q5T4S7 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC0.29□□□□□ -2.36
UBR4Q5T4S7 AL355472.4-201ENST00000610233 626 ntBASIC0.29□□□□□ -2.36
UBR4Q5T4S7 MTND5P16-201ENST00000460269 1703 ntBASIC0.29□□□□□ -2.36
UBR4Q5T4S7 RNA5SP93-201ENST00000362525 114 ntBASIC0.29□□□□□ -2.36
UBR4Q5T4S7 SNORD56.5-201ENST00000364281 72 ntBASIC0.29□□□□□ -2.36
UBR4Q5T4S7 RNU6-234P-201ENST00000365229 104 ntBASIC0.29□□□□□ -2.36
UBR4Q5T4S7 SNRPEP4-201ENST00000435815 279 ntBASIC0.29□□□□□ -2.36
UBR4Q5T4S7 AC068446.3-201ENST00000555285 382 ntBASIC0.29□□□□□ -2.36
UBR4Q5T4S7 ZNF192P1-203ENST00000565888 810 ntBASIC0.29□□□□□ -2.36
UBR4Q5T4S7 MIR4716-201ENST00000579628 84 ntBASIC0.29□□□□□ -2.36
UBR4Q5T4S7 MIR8064-201ENST00000612863 90 ntBASIC0.29□□□□□ -2.36
UBR4Q5T4S7 C2orf27A-204ENST00000623058 969 ntBASIC0.29□□□□□ -2.36
UBR4Q5T4S7 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC0.29□□□□□ -2.36
UBR4Q5T4S7 RNU6-654P-201ENST00000364373 107 ntBASIC0.28□□□□□ -2.36
UBR4Q5T4S7 RNU6-939P-201ENST00000384634 107 ntBASIC0.28□□□□□ -2.36
UBR4Q5T4S7 Y_RNA.551-201ENST00000384661 102 ntBASIC0.28□□□□□ -2.36
UBR4Q5T4S7 MTND4P6-201ENST00000438297 472 ntBASIC0.28□□□□□ -2.36
UBR4Q5T4S7 AL031183.1-201ENST00000457667 207 ntBASIC0.28□□□□□ -2.36
UBR4Q5T4S7 AL049830.1-201ENST00000468034 425 ntBASIC0.28□□□□□ -2.36
UBR4Q5T4S7 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC0.28□□□□□ -2.36
UBR4Q5T4S7 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.28□□□□□ -2.36
UBR4Q5T4S7 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
UBR4Q5T4S7 RNA5SP167-201ENST00000365461 116 ntBASIC0.28□□□□□ -2.36
UBR4Q5T4S7 RNU1-101P-201ENST00000391171 127 ntBASIC0.28□□□□□ -2.36
UBR4Q5T4S7 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC0.28□□□□□ -2.36
UBR4Q5T4S7 MRPL42P6-201ENST00000486397 371 ntBASIC0.28□□□□□ -2.36
UBR4Q5T4S7 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC0.28□□□□□ -2.36
UBR4Q5T4S7 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC0.28□□□□□ -2.36
UBR4Q5T4S7 SNORA6-201ENST00000384033 151 ntBASIC0.28□□□□□ -2.36
UBR4Q5T4S7 SNORA50A-201ENST00000384225 134 ntBASIC0.28□□□□□ -2.36
UBR4Q5T4S7 ANAPC10P1-201ENST00000395991 556 ntBASIC0.28□□□□□ -2.36
UBR4Q5T4S7 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.28□□□□□ -2.36
UBR4Q5T4S7 RPS15AP11-201ENST00000594193 385 ntBASIC0.28□□□□□ -2.36
UBR4Q5T4S7 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC0.28□□□□□ -2.36
UBR4Q5T4S7 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC0.28□□□□□ -2.36
UBR4Q5T4S7 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.28□□□□□ -2.37
UBR4Q5T4S7 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC0.28□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms