Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 RNU6-667P-201ENST00000517186 102 ntBASIC1.24□□□□□ -2.21
VBP1P61758 AC103833.1-201ENST00000517442 172 ntBASIC1.24□□□□□ -2.21
VBP1P61758 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC1.24□□□□□ -2.21
VBP1P61758 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
VBP1P61758 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC1.24□□□□□ -2.21
VBP1P61758 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC1.24□□□□□ -2.21
VBP1P61758 MRPS36P5-201ENST00000551909 298 ntBASIC1.24□□□□□ -2.21
VBP1P61758 CYP2C61P-201ENST00000604072 290 ntBASIC1.24□□□□□ -2.21
VBP1P61758 AL118556.2-201ENST00000614375 824 ntBASIC1.24□□□□□ -2.21
VBP1P61758 MIR8074-201ENST00000615081 81 ntBASIC1.24□□□□□ -2.21
VBP1P61758 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.24□□□□□ -2.21
VBP1P61758 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.24□□□□□ -2.21
VBP1P61758 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.23□□□□□ -2.21
VBP1P61758 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
VBP1P61758 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
VBP1P61758 Y_RNA.548-201ENST00000384656 105 ntBASIC1.23□□□□□ -2.21
VBP1P61758 RNU6-1140P-201ENST00000410517 106 ntBASIC1.23□□□□□ -2.21
VBP1P61758 AL451062.2-201ENST00000427515 271 ntBASIC1.23□□□□□ -2.21
VBP1P61758 AC015922.2-201ENST00000435593 184 ntBASIC1.23□□□□□ -2.21
VBP1P61758 AL121601.2-201ENST00000438019 707 ntBASIC1.23□□□□□ -2.21
VBP1P61758 CR769776.1-201ENST00000441254 787 ntBASIC1.23□□□□□ -2.21
VBP1P61758 SNRPGP13-201ENST00000442212 177 ntBASIC1.23□□□□□ -2.21
VBP1P61758 AC245517.4-201ENST00000448601 281 ntBASIC1.23□□□□□ -2.21
VBP1P61758 OFD1P3Y-201ENST00000453312 783 ntBASIC1.23□□□□□ -2.21
VBP1P61758 RPS15AP17-201ENST00000470598 390 ntBASIC1.23□□□□□ -2.21
VBP1P61758 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.23□□□□□ -2.21
VBP1P61758 AC027309.2-201ENST00000520566 192 ntBASIC1.23□□□□□ -2.21
VBP1P61758 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.23□□□□□ -2.21
VBP1P61758 CYCSP27-201ENST00000527643 293 ntBASIC1.23□□□□□ -2.21
VBP1P61758 OR5B19P-201ENST00000531766 928 ntBASIC1.23□□□□□ -2.21
VBP1P61758 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.23□□□□□ -2.21
VBP1P61758 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.23□□□□□ -2.21
VBP1P61758 AC090615.1-201ENST00000577519 154 ntBASIC1.23□□□□□ -2.21
VBP1P61758 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.23□□□□□ -2.21
VBP1P61758 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.23□□□□□ -2.21
VBP1P61758 AC069304.2-201ENST00000605154 435 ntBASIC1.23□□□□□ -2.21
VBP1P61758 AC087045.1-201ENST00000605856 382 ntBASIC1.23□□□□□ -2.21
VBP1P61758 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.23□□□□□ -2.21
VBP1P61758 AC010133.1-201ENST00000615809 842 ntBASIC1.23□□□□□ -2.21
VBP1P61758 MIR7843-201ENST00000622274 79 ntBASIC1.23□□□□□ -2.21
VBP1P61758 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
VBP1P61758 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
VBP1P61758 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
VBP1P61758 SNORD65C-201ENST00000390962 71 ntBASIC1.22□□□□□ -2.21
VBP1P61758 RNU2-68P-201ENST00000410878 191 ntBASIC1.22□□□□□ -2.21
VBP1P61758 RNU2-41P-201ENST00000410991 178 ntBASIC1.22□□□□□ -2.21
VBP1P61758 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.22□□□□□ -2.21
VBP1P61758 USP9YP35-201ENST00000435696 412 ntBASIC1.22□□□□□ -2.21
VBP1P61758 AC234064.1-201ENST00000436312 247 ntBASIC1.22□□□□□ -2.21
VBP1P61758 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.22□□□□□ -2.21
VBP1P61758 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC1.22□□□□□ -2.21
VBP1P61758 AC017099.1-201ENST00000448261 1028 ntBASIC1.22□□□□□ -2.21
VBP1P61758 NDUFAF4P3-201ENST00000456468 525 ntBASIC1.22□□□□□ -2.21
VBP1P61758 AC117522.2-201ENST00000510049 657 ntBASIC1.22□□□□□ -2.21
VBP1P61758 RNA5SP445-201ENST00000515889 115 ntBASIC1.22□□□□□ -2.21
VBP1P61758 AP003034.1-201ENST00000534621 422 ntBASIC1.22□□□□□ -2.21
VBP1P61758 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.22□□□□□ -2.21
VBP1P61758 RPL21P5-201ENST00000554662 472 ntBASIC1.22□□□□□ -2.21
VBP1P61758 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.22□□□□□ -2.21
VBP1P61758 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC1.22□□□□□ -2.21
VBP1P61758 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.22□□□□□ -2.21
VBP1P61758 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.22□□□□□ -2.21
VBP1P61758 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
VBP1P61758 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
VBP1P61758 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
VBP1P61758 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.21□□□□□ -2.21
VBP1P61758 AC091812.1-201ENST00000432235 1948 ntBASIC1.21□□□□□ -2.22
VBP1P61758 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
VBP1P61758 U8.1-201ENST00000362843 134 ntBASIC1.21□□□□□ -2.22
VBP1P61758 MIR597-201ENST00000384968 97 ntBASIC1.21□□□□□ -2.22
VBP1P61758 SNORA3.2-201ENST00000408221 125 ntBASIC1.21□□□□□ -2.22
VBP1P61758 MTND4LP14-201ENST00000429447 288 ntBASIC1.21□□□□□ -2.22
VBP1P61758 TOMM22P2-201ENST00000430735 237 ntBASIC1.21□□□□□ -2.22
VBP1P61758 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.21□□□□□ -2.22
VBP1P61758 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.21□□□□□ -2.22
VBP1P61758 AC007677.1-201ENST00000445757 515 ntBASIC1.21□□□□□ -2.22
VBP1P61758 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.21□□□□□ -2.22
VBP1P61758 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.21□□□□□ -2.22
VBP1P61758 CECR9-201ENST00000453421 199 ntBASIC1.21□□□□□ -2.22
VBP1P61758 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.21□□□□□ -2.22
VBP1P61758 snoU13.9-201ENST00000458927 103 ntBASIC1.21□□□□□ -2.22
VBP1P61758 AC112771.1-201ENST00000463581 102 ntBASIC1.21□□□□□ -2.22
VBP1P61758 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.21□□□□□ -2.22
VBP1P61758 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.21□□□□□ -2.22
VBP1P61758 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
VBP1P61758 AP004247.1-201ENST00000531556 1289 ntBASIC1.21□□□□□ -2.22
VBP1P61758 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.21□□□□□ -2.22
VBP1P61758 AC125611.1-201ENST00000549563 229 ntBASIC1.21□□□□□ -2.22
VBP1P61758 AC019288.1-201ENST00000557918 224 ntBASIC1.21□□□□□ -2.22
VBP1P61758 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.21□□□□□ -2.22
VBP1P61758 AL050343.2-201ENST00000607338 280 ntBASIC1.21□□□□□ -2.22
VBP1P61758 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.21□□□□□ -2.22
VBP1P61758 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.21□□□□□ -2.22
VBP1P61758 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.21□□□□□ -2.22
VBP1P61758 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
VBP1P61758 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.21□□□□□ -2.22
VBP1P61758 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.21□□□□□ -2.22
VBP1P61758 RNU6-637P-201ENST00000384050 107 ntBASIC1.2□□□□□ -2.22
VBP1P61758 RNU6-658P-201ENST00000384606 106 ntBASIC1.2□□□□□ -2.22
VBP1P61758 MIR504-201ENST00000385065 83 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms