Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
SHMT2P34897 MTND4LP18-201ENST00000526864 291 ntBASIC2.24□□□□□ -2.05
SHMT2P34897 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.24□□□□□ -2.05
SHMT2P34897 AC009063.1-201ENST00000563342 702 ntBASIC2.24□□□□□ -2.05
SHMT2P34897 MIR5697-201ENST00000578045 78 ntBASIC2.24□□□□□ -2.05
SHMT2P34897 SNORD53-201ENST00000579969 78 ntBASIC2.24□□□□□ -2.05
SHMT2P34897 AC090616.3-201ENST00000582184 217 ntBASIC2.24□□□□□ -2.05
SHMT2P34897 AC005498.1-201ENST00000592125 465 ntBASIC2.24□□□□□ -2.05
SHMT2P34897 AL355877.2-201ENST00000603670 358 ntBASIC2.24□□□□□ -2.05
SHMT2P34897 AC105129.3-201ENST00000605455 485 ntBASIC2.24□□□□□ -2.05
SHMT2P34897 AC103710.2-201ENST00000609912 942 ntBASIC2.24□□□□□ -2.05
SHMT2P34897 AC025594.3-201ENST00000613068 790 ntBASIC2.24□□□□□ -2.05
SHMT2P34897 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
SHMT2P34897 AC091953.2-201ENST00000623979 160 ntBASIC2.24□□□□□ -2.05
SHMT2P34897 AC068057.2-201ENST00000624047 895 ntBASIC2.24□□□□□ -2.05
SHMT2P34897 AL160394.1-201ENST00000624765 724 ntBASIC2.24□□□□□ -2.05
SHMT2P34897 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
SHMT2P34897 AC004944.1-201ENST00000517807 3059 ntBASIC2.24□□□□□ -2.05
SHMT2P34897 AC092104.1-201ENST00000497346 1441 ntBASIC2.24□□□□□ -2.05
SHMT2P34897 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SHMT2P34897 RNU6-512P-201ENST00000364438 103 ntBASIC2.23□□□□□ -2.05
SHMT2P34897 SET-203ENST00000372688 801 ntTSL 2 BASIC2.23□□□□□ -2.05
SHMT2P34897 RNU1-73P-201ENST00000383971 164 ntBASIC2.23□□□□□ -2.05
SHMT2P34897 RNU6-533P-201ENST00000384144 107 ntBASIC2.23□□□□□ -2.05
SHMT2P34897 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.23□□□□□ -2.05
SHMT2P34897 RNU2-36P-201ENST00000410361 191 ntBASIC2.23□□□□□ -2.05
SHMT2P34897 RNU2-68P-201ENST00000410878 191 ntBASIC2.23□□□□□ -2.05
SHMT2P34897 RPL26P27-201ENST00000414397 437 ntBASIC2.23□□□□□ -2.05
SHMT2P34897 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.23□□□□□ -2.05
SHMT2P34897 RAC1P6-201ENST00000423911 575 ntBASIC2.23□□□□□ -2.05
SHMT2P34897 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.23□□□□□ -2.05
SHMT2P34897 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.23□□□□□ -2.05
SHMT2P34897 MYL8P-204ENST00000431574 518 ntBASIC2.23□□□□□ -2.05
SHMT2P34897 GPM6BP2-201ENST00000432046 144 ntBASIC2.23□□□□□ -2.05
SHMT2P34897 RPS15AP28-201ENST00000435088 386 ntBASIC2.23□□□□□ -2.05
SHMT2P34897 GPM6BP1-201ENST00000446387 144 ntBASIC2.23□□□□□ -2.05
SHMT2P34897 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.23□□□□□ -2.05
SHMT2P34897 EPS15P1-201ENST00000448836 336 ntBASIC2.23□□□□□ -2.05
SHMT2P34897 ZNF114P1-201ENST00000453500 292 ntBASIC2.23□□□□□ -2.05
SHMT2P34897 MTND1P12-201ENST00000455231 147 ntBASIC2.23□□□□□ -2.05
SHMT2P34897 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.23□□□□□ -2.05
SHMT2P34897 AC112204.1-201ENST00000502591 103 ntBASIC2.23□□□□□ -2.05
SHMT2P34897 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.23□□□□□ -2.05
SHMT2P34897 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.23□□□□□ -2.05
SHMT2P34897 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.23□□□□□ -2.05
SHMT2P34897 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.23□□□□□ -2.05
SHMT2P34897 AC090616.2-202ENST00000584248 222 ntBASIC2.23□□□□□ -2.05
SHMT2P34897 OR1M4P-201ENST00000589199 287 ntBASIC2.23□□□□□ -2.05
SHMT2P34897 AL356280.1-201ENST00000603614 379 ntBASIC2.23□□□□□ -2.05
SHMT2P34897 AC007363.1-201ENST00000604736 620 ntBASIC2.23□□□□□ -2.05
SHMT2P34897 AC107294.1-201ENST00000609524 467 ntBASIC2.23□□□□□ -2.05
SHMT2P34897 AL355816.2-201ENST00000610049 647 ntBASIC2.23□□□□□ -2.05
SHMT2P34897 AC087683.2-201ENST00000611384 326 ntBASIC2.23□□□□□ -2.05
SHMT2P34897 DUSP12P1-201ENST00000612874 516 ntBASIC2.23□□□□□ -2.05
SHMT2P34897 AC009159.2-201ENST00000617603 606 ntBASIC2.23□□□□□ -2.05
SHMT2P34897 AC110491.1-201ENST00000562191 2010 ntBASIC2.23□□□□□ -2.05
SHMT2P34897 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SHMT2P34897 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SHMT2P34897 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
SHMT2P34897 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
SHMT2P34897 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
SHMT2P34897 SNORA68.1-201ENST00000364537 132 ntBASIC2.22□□□□□ -2.05
SHMT2P34897 RN7SKP226-201ENST00000364912 300 ntBASIC2.22□□□□□ -2.05
SHMT2P34897 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.22□□□□□ -2.05
SHMT2P34897 AL021407.1-201ENST00000404531 386 ntBASIC2.22□□□□□ -2.05
SHMT2P34897 NDUFS5P4-201ENST00000412983 318 ntBASIC2.22□□□□□ -2.05
SHMT2P34897 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.22□□□□□ -2.05
SHMT2P34897 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.22□□□□□ -2.05
SHMT2P34897 AL356320.1-201ENST00000429616 163 ntBASIC2.22□□□□□ -2.05
SHMT2P34897 HMGB1P9-201ENST00000429856 646 ntBASIC2.22□□□□□ -2.05
SHMT2P34897 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.22□□□□□ -2.05
SHMT2P34897 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.22□□□□□ -2.05
SHMT2P34897 RPL36AP53-201ENST00000432891 316 ntBASIC2.22□□□□□ -2.05
SHMT2P34897 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.22□□□□□ -2.05
SHMT2P34897 RPL22P17-201ENST00000438729 315 ntBASIC2.22□□□□□ -2.05
SHMT2P34897 RPS15AP7-201ENST00000439294 405 ntBASIC2.22□□□□□ -2.05
SHMT2P34897 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.22□□□□□ -2.05
SHMT2P34897 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.22□□□□□ -2.05
SHMT2P34897 AC105252.1-201ENST00000503089 286 ntBASIC2.22□□□□□ -2.05
SHMT2P34897 AC098591.2-201ENST00000510152 315 ntBASIC2.22□□□□□ -2.05
SHMT2P34897 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.22□□□□□ -2.05
SHMT2P34897 MTCYBP20-201ENST00000524239 1129 ntBASIC2.22□□□□□ -2.05
SHMT2P34897 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
SHMT2P34897 AC008015.1-201ENST00000555505 465 ntBASIC2.22□□□□□ -2.05
SHMT2P34897 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.22□□□□□ -2.05
SHMT2P34897 AC012435.1-202ENST00000568772 240 ntBASIC2.22□□□□□ -2.05
SHMT2P34897 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.22□□□□□ -2.05
SHMT2P34897 MIR3118-1-201ENST00000581787 76 ntBASIC2.22□□□□□ -2.05
SHMT2P34897 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.22□□□□□ -2.05
SHMT2P34897 AP001981.2-201ENST00000603241 418 ntBASIC2.22□□□□□ -2.05
SHMT2P34897 AC018638.7-201ENST00000605836 1114 ntBASIC2.22□□□□□ -2.05
SHMT2P34897 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.22□□□□□ -2.05
SHMT2P34897 AC013562.2-201ENST00000611632 603 ntBASIC2.22□□□□□ -2.05
SHMT2P34897 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.22□□□□□ -2.05
SHMT2P34897 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.22□□□□□ -2.05
SHMT2P34897 AC092140.2-201ENST00000618027 521 ntBASIC2.22□□□□□ -2.05
SHMT2P34897 MIR6766-201ENST00000622641 72 ntBASIC2.22□□□□□ -2.05
SHMT2P34897 AC064859.1-201ENST00000624741 174 ntBASIC2.22□□□□□ -2.05
SHMT2P34897 AC006020.1-201ENST00000420179 1854 ntBASIC2.22□□□□□ -2.05
SHMT2P34897 RNU1-91P-201ENST00000364746 163 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms