Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 MTND4LP5-201ENST00000605152 292 ntBASIC1.37□□□□□ -2.19
COL4A5P29400 AC012467.1-201ENST00000607740 256 ntBASIC1.37□□□□□ -2.19
COL4A5P29400 AC004067.1-201ENST00000608733 700 ntBASIC1.37□□□□□ -2.19
COL4A5P29400 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.37□□□□□ -2.19
COL4A5P29400 AC025594.3-201ENST00000613068 790 ntBASIC1.37□□□□□ -2.19
COL4A5P29400 AC245884.12-201ENST00000615364 59 ntBASIC1.37□□□□□ -2.19
COL4A5P29400 AC009902.3-201ENST00000606235 2172 ntBASIC1.37□□□□□ -2.19
COL4A5P29400 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
COL4A5P29400 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.36□□□□□ -2.19
COL4A5P29400 U6.112-201ENST00000384129 70 ntBASIC1.36□□□□□ -2.19
COL4A5P29400 RNU6-217P-201ENST00000384164 104 ntBASIC1.36□□□□□ -2.19
COL4A5P29400 TXNP7-201ENST00000406296 293 ntBASIC1.36□□□□□ -2.19
COL4A5P29400 AL139098.1-201ENST00000407291 389 ntBASIC1.36□□□□□ -2.19
COL4A5P29400 RNU6-920P-201ENST00000410926 92 ntBASIC1.36□□□□□ -2.19
COL4A5P29400 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC1.36□□□□□ -2.19
COL4A5P29400 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.36□□□□□ -2.19
COL4A5P29400 AL592310.1-201ENST00000414330 671 ntBASIC1.36□□□□□ -2.19
COL4A5P29400 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.36□□□□□ -2.19
COL4A5P29400 SNRPEP10-201ENST00000420249 274 ntBASIC1.36□□□□□ -2.19
COL4A5P29400 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC1.36□□□□□ -2.19
COL4A5P29400 MICF-203ENST00000432679 129 ntBASIC1.36□□□□□ -2.19
COL4A5P29400 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.36□□□□□ -2.19
COL4A5P29400 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.36□□□□□ -2.19
COL4A5P29400 AC108059.3-201ENST00000456388 214 ntBASIC1.36□□□□□ -2.19
COL4A5P29400 AC021382.1-201ENST00000483523 359 ntBASIC1.36□□□□□ -2.19
COL4A5P29400 EIF4EP3-201ENST00000498782 656 ntBASIC1.36□□□□□ -2.19
COL4A5P29400 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC1.36□□□□□ -2.19
COL4A5P29400 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.36□□□□□ -2.19
COL4A5P29400 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC1.36□□□□□ -2.19
COL4A5P29400 AC114786.4-201ENST00000508771 728 ntBASIC1.36□□□□□ -2.19
COL4A5P29400 AC114797.1-201ENST00000514003 728 ntBASIC1.36□□□□□ -2.19
COL4A5P29400 RNU6-1256P-201ENST00000516539 103 ntBASIC1.36□□□□□ -2.19
COL4A5P29400 RNU6-113P-201ENST00000516653 101 ntBASIC1.36□□□□□ -2.19
COL4A5P29400 SUB1P1-201ENST00000524415 382 ntBASIC1.36□□□□□ -2.19
COL4A5P29400 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.36□□□□□ -2.19
COL4A5P29400 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC1.36□□□□□ -2.19
COL4A5P29400 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.36□□□□□ -2.19
COL4A5P29400 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.36□□□□□ -2.19
COL4A5P29400 NACAP3-201ENST00000552100 481 ntBASIC1.36□□□□□ -2.19
COL4A5P29400 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.36□□□□□ -2.19
COL4A5P29400 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.36□□□□□ -2.19
COL4A5P29400 MTCO1P40-201ENST00000574371 625 ntBASIC1.36□□□□□ -2.19
COL4A5P29400 ZNF92P2-201ENST00000600543 1059 ntBASIC1.36□□□□□ -2.19
COL4A5P29400 AC011451.2-201ENST00000604303 598 ntBASIC1.36□□□□□ -2.19
COL4A5P29400 MIR6130-201ENST00000619419 109 ntBASIC1.36□□□□□ -2.19
COL4A5P29400 AL356473.1-201ENST00000406203 1408 ntBASIC1.36□□□□□ -2.19
COL4A5P29400 RPL7P27-201ENST00000403775 720 ntBASIC1.35□□□□□ -2.19
COL4A5P29400 MTND3P20-201ENST00000407663 186 ntBASIC1.35□□□□□ -2.19
COL4A5P29400 TAF13P2-201ENST00000416876 286 ntBASIC1.35□□□□□ -2.19
COL4A5P29400 MTATP6P27-201ENST00000416987 621 ntBASIC1.35□□□□□ -2.19
COL4A5P29400 AC008850.1-201ENST00000427546 362 ntBASIC1.35□□□□□ -2.19
COL4A5P29400 AL590233.1-201ENST00000430017 456 ntBASIC1.35□□□□□ -2.19
COL4A5P29400 AC092393.1-201ENST00000439625 742 ntBASIC1.35□□□□□ -2.19
COL4A5P29400 AL136380.1-201ENST00000447970 162 ntBASIC1.35□□□□□ -2.19
COL4A5P29400 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.35□□□□□ -2.19
COL4A5P29400 MRPL42P4-201ENST00000453267 443 ntBASIC1.35□□□□□ -2.19
COL4A5P29400 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
COL4A5P29400 MRPS17P3-201ENST00000465453 385 ntBASIC1.35□□□□□ -2.19
COL4A5P29400 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.35□□□□□ -2.19
COL4A5P29400 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.35□□□□□ -2.19
COL4A5P29400 SNORA31.23-201ENST00000517219 133 ntBASIC1.35□□□□□ -2.19
COL4A5P29400 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.35□□□□□ -2.19
COL4A5P29400 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.35□□□□□ -2.19
COL4A5P29400 MIR3122-201ENST00000577243 73 ntBASIC1.35□□□□□ -2.19
COL4A5P29400 AC090616.3-201ENST00000582184 217 ntBASIC1.35□□□□□ -2.19
COL4A5P29400 RPS15AP11-201ENST00000594193 385 ntBASIC1.35□□□□□ -2.19
COL4A5P29400 AP001429.1-201ENST00000602568 530 ntBASIC1.35□□□□□ -2.19
COL4A5P29400 AC005332.6-201ENST00000613178 446 ntBASIC1.35□□□□□ -2.19
COL4A5P29400 AL161423.1-201ENST00000613700 262 ntBASIC1.35□□□□□ -2.19
COL4A5P29400 AC006338.1-201ENST00000618453 749 ntBASIC1.35□□□□□ -2.19
COL4A5P29400 AL138955.1-201ENST00000622881 1040 ntBASIC1.35□□□□□ -2.19
COL4A5P29400 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.35□□□□□ -2.19
COL4A5P29400 AC087821.2-201ENST00000637086 450 ntBASIC1.35□□□□□ -2.19
COL4A5P29400 AC010329.5-201ENST00000623497 2174 ntBASIC1.35□□□□□ -2.19
COL4A5P29400 Y_RNA.115-201ENST00000363272 98 ntBASIC1.35□□□□□ -2.19
COL4A5P29400 UBE2V1P15-201ENST00000407776 448 ntBASIC1.35□□□□□ -2.19
COL4A5P29400 RN7SKP158-201ENST00000410453 326 ntBASIC1.35□□□□□ -2.19
COL4A5P29400 AL158050.1-201ENST00000416077 457 ntBASIC1.35□□□□□ -2.19
COL4A5P29400 MTCO2P5-201ENST00000422621 426 ntBASIC1.35□□□□□ -2.19
COL4A5P29400 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC1.35□□□□□ -2.19
COL4A5P29400 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.35□□□□□ -2.19
COL4A5P29400 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.35□□□□□ -2.19
COL4A5P29400 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
COL4A5P29400 OFD1P3Y-201ENST00000453312 783 ntBASIC1.35□□□□□ -2.19
COL4A5P29400 AP1S2P1-201ENST00000457344 379 ntBASIC1.35□□□□□ -2.19
COL4A5P29400 AC022493.1-201ENST00000492984 337 ntBASIC1.35□□□□□ -2.19
COL4A5P29400 AC114322.1-201ENST00000506771 926 ntBASIC1.35□□□□□ -2.19
COL4A5P29400 RNU5F-8P-201ENST00000515941 111 ntBASIC1.35□□□□□ -2.19
COL4A5P29400 RNA5SP395-201ENST00000516567 118 ntBASIC1.35□□□□□ -2.19
COL4A5P29400 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC1.35□□□□□ -2.19
COL4A5P29400 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC1.35□□□□□ -2.19
COL4A5P29400 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC1.35□□□□□ -2.19
COL4A5P29400 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.35□□□□□ -2.19
COL4A5P29400 MIR4658-201ENST00000584344 65 ntBASIC1.35□□□□□ -2.19
COL4A5P29400 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC1.35□□□□□ -2.19
COL4A5P29400 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.35□□□□□ -2.19
COL4A5P29400 VN1R107P-201ENST00000601784 209 ntBASIC1.35□□□□□ -2.19
COL4A5P29400 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.35□□□□□ -2.19
COL4A5P29400 AC103710.4-201ENST00000609301 899 ntBASIC1.35□□□□□ -2.19
COL4A5P29400 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms