Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 AP003730.1-201ENST00000524605 285 ntBASIC3.92□□□□□ -1.78
PTX3P26022 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.92□□□□□ -1.78
PTX3P26022 AC007938.3-201ENST00000604965 623 ntBASIC3.92□□□□□ -1.78
PTX3P26022 AC019193.3-201ENST00000609144 554 ntBASIC3.92□□□□□ -1.78
PTX3P26022 AL591516.1-201ENST00000611326 274 ntBASIC3.92□□□□□ -1.78
PTX3P26022 AC099506.2-201ENST00000623074 221 ntBASIC3.92□□□□□ -1.78
PTX3P26022 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PTX3P26022 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.92□□□□□ -1.78
PTX3P26022 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PTX3P26022 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
PTX3P26022 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
PTX3P26022 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.91□□□□□ -1.78
PTX3P26022 Y_RNA.28-201ENST00000362554 111 ntBASIC3.91□□□□□ -1.78
PTX3P26022 RNA5SP322-201ENST00000363617 119 ntBASIC3.91□□□□□ -1.78
PTX3P26022 SNORD14B-201ENST00000364533 90 ntBASIC3.91□□□□□ -1.78
PTX3P26022 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
PTX3P26022 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PTX3P26022 MIR493-201ENST00000385254 89 ntBASIC3.91□□□□□ -1.78
PTX3P26022 Z98941.1-201ENST00000407764 100 ntBASIC3.91□□□□□ -1.78
PTX3P26022 USMG5P1-201ENST00000425964 177 ntBASIC3.91□□□□□ -1.78
PTX3P26022 TOMM20P4-201ENST00000427861 435 ntBASIC3.91□□□□□ -1.78
PTX3P26022 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.91□□□□□ -1.78
PTX3P26022 AC097713.2-201ENST00000430199 356 ntBASIC3.91□□□□□ -1.78
PTX3P26022 AL358472.1-201ENST00000431295 329 ntBASIC3.91□□□□□ -1.78
PTX3P26022 AC236972.1-201ENST00000433225 199 ntBASIC3.91□□□□□ -1.78
PTX3P26022 SNRPEP9-201ENST00000436794 238 ntBASIC3.91□□□□□ -1.78
PTX3P26022 NDUFB4P6-201ENST00000436819 366 ntBASIC3.91□□□□□ -1.78
PTX3P26022 AL356535.1-201ENST00000440335 398 ntBASIC3.91□□□□□ -1.78
PTX3P26022 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.91□□□□□ -1.78
PTX3P26022 RN7SL604P-201ENST00000492589 296 ntBASIC3.91□□□□□ -1.78
PTX3P26022 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PTX3P26022 RNU6-1213P-201ENST00000517075 94 ntBASIC3.91□□□□□ -1.78
PTX3P26022 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.91□□□□□ -1.78
PTX3P26022 AC025627.2-201ENST00000576220 160 ntBASIC3.91□□□□□ -1.78
PTX3P26022 MIR4700-201ENST00000578311 74 ntBASIC3.91□□□□□ -1.78
PTX3P26022 AC005899.2-201ENST00000584353 90 ntBASIC3.91□□□□□ -1.78
PTX3P26022 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.91□□□□□ -1.78
PTX3P26022 AL160281.1-201ENST00000605307 311 ntBASIC3.91□□□□□ -1.78
PTX3P26022 PLCE1P1-201ENST00000622094 305 ntBASIC3.91□□□□□ -1.78
PTX3P26022 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.91□□□□□ -1.78
PTX3P26022 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.91□□□□□ -1.78
PTX3P26022 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.78
PTX3P26022 AL672296.1-201ENST00000427780 2158 ntBASIC3.9□□□□□ -1.78
PTX3P26022 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.78
PTX3P26022 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.9□□□□□ -1.79
PTX3P26022 AC106871.1-201ENST00000568324 3102 ntBASIC3.9□□□□□ -1.79
PTX3P26022 RNU6-1115P-201ENST00000362490 106 ntBASIC3.9□□□□□ -1.79
PTX3P26022 SNORD35B-201ENST00000363660 87 ntBASIC3.9□□□□□ -1.79
PTX3P26022 Y_RNA.216-201ENST00000364205 93 ntBASIC3.9□□□□□ -1.79
PTX3P26022 SNORA63C-201ENST00000364578 129 ntBASIC3.9□□□□□ -1.79
PTX3P26022 AC117470.1-201ENST00000381974 330 ntBASIC3.9□□□□□ -1.79
PTX3P26022 DEFB109C-201ENST00000382575 264 ntBASIC3.9□□□□□ -1.79
PTX3P26022 DEFB109B-201ENST00000382656 264 ntBASIC3.9□□□□□ -1.79
PTX3P26022 RNU6-306P-201ENST00000384617 107 ntBASIC3.9□□□□□ -1.79
PTX3P26022 PMCHL1-202ENST00000423102 261 ntBASIC3.9□□□□□ -1.79
PTX3P26022 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.9□□□□□ -1.79
PTX3P26022 USP9YP30-201ENST00000430729 455 ntBASIC3.9□□□□□ -1.79
PTX3P26022 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.9□□□□□ -1.79
PTX3P26022 NUTF2P3-201ENST00000448540 384 ntBASIC3.9□□□□□ -1.79
PTX3P26022 ANP32BP2-201ENST00000454525 545 ntBASIC3.9□□□□□ -1.79
PTX3P26022 PCMTD1P1-201ENST00000455560 355 ntBASIC3.9□□□□□ -1.79
PTX3P26022 RNU7-187P-201ENST00000458985 68 ntBASIC3.9□□□□□ -1.79
PTX3P26022 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.9□□□□□ -1.79
PTX3P26022 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.9□□□□□ -1.79
PTX3P26022 AC104576.1-201ENST00000524225 88 ntBASIC3.9□□□□□ -1.79
PTX3P26022 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.9□□□□□ -1.79
PTX3P26022 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.9□□□□□ -1.79
PTX3P26022 ZNF192P1-203ENST00000565888 810 ntBASIC3.9□□□□□ -1.79
PTX3P26022 AC011494.1-201ENST00000596454 237 ntBASIC3.9□□□□□ -1.79
PTX3P26022 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.9□□□□□ -1.79
PTX3P26022 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.9□□□□□ -1.79
PTX3P26022 AC016925.2-201ENST00000605108 242 ntBASIC3.9□□□□□ -1.79
PTX3P26022 AC004805.2-201ENST00000605382 482 ntBASIC3.9□□□□□ -1.79
PTX3P26022 ARF4P1-201ENST00000605447 541 ntBASIC3.9□□□□□ -1.79
PTX3P26022 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.9□□□□□ -1.79
PTX3P26022 AC040896.1-201ENST00000613819 479 ntBASIC3.9□□□□□ -1.79
PTX3P26022 AL445567.2-201ENST00000618935 498 ntBASIC3.9□□□□□ -1.79
PTX3P26022 Z69720.2-201ENST00000624755 279 ntBASIC3.9□□□□□ -1.79
PTX3P26022 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PTX3P26022 AC066616.2-201ENST00000559334 1481 ntBASIC3.9□□□□□ -1.79
PTX3P26022 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
PTX3P26022 MAPK10-372ENST00000641954 3413 ntBASIC3.9□□□□□ -1.79
PTX3P26022 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.9□□□□□ -1.79
PTX3P26022 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PTX3P26022 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.9□□□□□ -1.79
PTX3P26022 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.9□□□□□ -1.79
PTX3P26022 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.9□□□□□ -1.79
PTX3P26022 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.89□□□□□ -1.79
PTX3P26022 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
PTX3P26022 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
PTX3P26022 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.89□□□□□ -1.79
PTX3P26022 Y_RNA.404-201ENST00000383978 102 ntBASIC3.89□□□□□ -1.79
PTX3P26022 RNU6-639P-201ENST00000384074 107 ntBASIC3.89□□□□□ -1.79
PTX3P26022 RNU6-890P-201ENST00000384121 107 ntBASIC3.89□□□□□ -1.79
PTX3P26022 MIR517A-201ENST00000385001 87 ntBASIC3.89□□□□□ -1.79
PTX3P26022 MIR34A-201ENST00000385130 110 ntBASIC3.89□□□□□ -1.79
PTX3P26022 SNORD73A-201ENST00000386062 65 ntBASIC3.89□□□□□ -1.79
PTX3P26022 MIR1251-201ENST00000408552 70 ntBASIC3.89□□□□□ -1.79
PTX3P26022 AL030996.1-201ENST00000411430 235 ntBASIC3.89□□□□□ -1.79
PTX3P26022 RHEBP3-201ENST00000411920 351 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms