Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AL590705.4-201ENST00000532209 134 ntBASIC4.09□□□□□ -1.75
ATF4P18848 AC005868.1-201ENST00000536421 331 ntBASIC4.09□□□□□ -1.75
ATF4P18848 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.09□□□□□ -1.75
ATF4P18848 AC004584.2-201ENST00000570407 410 ntBASIC4.09□□□□□ -1.75
ATF4P18848 MIR4489-201ENST00000578869 62 ntBASIC4.09□□□□□ -1.75
ATF4P18848 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.09□□□□□ -1.75
ATF4P18848 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
ATF4P18848 AC005592.1-201ENST00000566527 1640 ntBASIC4.09□□□□□ -1.76
ATF4P18848 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
ATF4P18848 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.76
ATF4P18848 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.09□□□□□ -1.76
ATF4P18848 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.09□□□□□ -1.76
ATF4P18848 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.76
ATF4P18848 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ATF4P18848 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.08□□□□□ -1.76
ATF4P18848 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
ATF4P18848 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.08□□□□□ -1.76
ATF4P18848 RNA5SP319-201ENST00000362768 119 ntBASIC4.08□□□□□ -1.76
ATF4P18848 RNU1-83P-201ENST00000363426 164 ntBASIC4.08□□□□□ -1.76
ATF4P18848 RNU6-843P-201ENST00000384454 104 ntBASIC4.08□□□□□ -1.76
ATF4P18848 MTCYBP2-201ENST00000407745 171 ntBASIC4.08□□□□□ -1.76
ATF4P18848 MIR1178-201ENST00000408396 91 ntBASIC4.08□□□□□ -1.76
ATF4P18848 RNA5SP36-201ENST00000410197 133 ntBASIC4.08□□□□□ -1.76
ATF4P18848 AC023141.4-201ENST00000412031 328 ntBASIC4.08□□□□□ -1.76
ATF4P18848 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.08□□□□□ -1.76
ATF4P18848 AC108032.1-201ENST00000416706 207 ntBASIC4.08□□□□□ -1.76
ATF4P18848 PTGES3P4-201ENST00000426243 356 ntBASIC4.08□□□□□ -1.76
ATF4P18848 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.08□□□□□ -1.76
ATF4P18848 AL513124.1-201ENST00000450410 614 ntBASIC4.08□□□□□ -1.76
ATF4P18848 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.08□□□□□ -1.76
ATF4P18848 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
ATF4P18848 AL031183.1-201ENST00000457667 207 ntBASIC4.08□□□□□ -1.76
ATF4P18848 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.08□□□□□ -1.76
ATF4P18848 RPL23AP62-201ENST00000463396 453 ntBASIC4.08□□□□□ -1.76
ATF4P18848 RN7SL51P-201ENST00000468230 285 ntBASIC4.08□□□□□ -1.76
ATF4P18848 RN7SL30P-201ENST00000488416 306 ntBASIC4.08□□□□□ -1.76
ATF4P18848 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.08□□□□□ -1.76
ATF4P18848 Y_RNA.720-201ENST00000517166 92 ntBASIC4.08□□□□□ -1.76
ATF4P18848 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ATF4P18848 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.08□□□□□ -1.76
ATF4P18848 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.08□□□□□ -1.76
ATF4P18848 AC136443.5-201ENST00000603741 370 ntBASIC4.08□□□□□ -1.76
ATF4P18848 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.08□□□□□ -1.76
ATF4P18848 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
ATF4P18848 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.07□□□□□ -1.76
ATF4P18848 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.07□□□□□ -1.76
ATF4P18848 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
ATF4P18848 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ATF4P18848 RNA5SP183-201ENST00000362452 119 ntBASIC4.07□□□□□ -1.76
ATF4P18848 RNU1-140P-201ENST00000365040 165 ntBASIC4.07□□□□□ -1.76
ATF4P18848 RNU6-142P-201ENST00000384019 107 ntBASIC4.07□□□□□ -1.76
ATF4P18848 AC009804.1-201ENST00000400949 179 ntBASIC4.07□□□□□ -1.76
ATF4P18848 MIR1183-201ENST00000408856 89 ntBASIC4.07□□□□□ -1.76
ATF4P18848 Y_RNA.605-201ENST00000410577 105 ntBASIC4.07□□□□□ -1.76
ATF4P18848 AC092423.1-201ENST00000430165 186 ntBASIC4.07□□□□□ -1.76
ATF4P18848 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC4.07□□□□□ -1.76
ATF4P18848 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC4.07□□□□□ -1.76
ATF4P18848 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.07□□□□□ -1.76
ATF4P18848 AC105399.1-202ENST00000447303 205 ntBASIC4.07□□□□□ -1.76
ATF4P18848 AC079354.2-201ENST00000453523 154 ntBASIC4.07□□□□□ -1.76
ATF4P18848 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.07□□□□□ -1.76
ATF4P18848 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.07□□□□□ -1.76
ATF4P18848 MTND5P22-201ENST00000458380 195 ntBASIC4.07□□□□□ -1.76
ATF4P18848 U3.44-201ENST00000458938 192 ntBASIC4.07□□□□□ -1.76
ATF4P18848 RPS26P21-201ENST00000475397 348 ntBASIC4.07□□□□□ -1.76
ATF4P18848 RN7SL814P-201ENST00000487715 300 ntBASIC4.07□□□□□ -1.76
ATF4P18848 RPL30P10-201ENST00000488148 337 ntBASIC4.07□□□□□ -1.76
ATF4P18848 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.07□□□□□ -1.76
ATF4P18848 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC4.07□□□□□ -1.76
ATF4P18848 RNU6-475P-201ENST00000516073 104 ntBASIC4.07□□□□□ -1.76
ATF4P18848 SNORA31.23-201ENST00000517219 133 ntBASIC4.07□□□□□ -1.76
ATF4P18848 RNU6-711P-201ENST00000517255 106 ntBASIC4.07□□□□□ -1.76
ATF4P18848 TRAV8-5-201ENST00000537369 341 ntBASIC4.07□□□□□ -1.76
ATF4P18848 HSBP1P1-201ENST00000555205 166 ntBASIC4.07□□□□□ -1.76
ATF4P18848 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.07□□□□□ -1.76
ATF4P18848 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC4.07□□□□□ -1.76
ATF4P18848 AC025281.1-201ENST00000567026 265 ntBASIC4.07□□□□□ -1.76
ATF4P18848 TVP23CP2-201ENST00000571473 623 ntBASIC4.07□□□□□ -1.76
ATF4P18848 MIR4680-201ENST00000580906 66 ntBASIC4.07□□□□□ -1.76
ATF4P18848 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.07□□□□□ -1.76
ATF4P18848 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.07□□□□□ -1.76
ATF4P18848 AC211433.2-201ENST00000608433 387 ntBASIC4.07□□□□□ -1.76
ATF4P18848 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC4.07□□□□□ -1.76
ATF4P18848 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.07□□□□□ -1.76
ATF4P18848 AC132068.1-201ENST00000623805 459 ntBASIC4.07□□□□□ -1.76
ATF4P18848 AL606534.2-204ENST00000635008 178 ntBASIC4.07□□□□□ -1.76
ATF4P18848 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.07□□□□□ -1.76
ATF4P18848 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
ATF4P18848 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ATF4P18848 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
ATF4P18848 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
ATF4P18848 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ATF4P18848 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
ATF4P18848 AC233981.2-201ENST00000611524 1614 ntBASIC4.06□□□□□ -1.76
ATF4P18848 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
ATF4P18848 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
ATF4P18848 RNU6-487P-201ENST00000365430 104 ntBASIC4.06□□□□□ -1.76
ATF4P18848 MIR544A-201ENST00000384855 91 ntBASIC4.06□□□□□ -1.76
ATF4P18848 MIR105-1-201ENST00000385222 81 ntBASIC4.06□□□□□ -1.76
ATF4P18848 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms