Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.26□□□□□ -1.89
CTPS1P17812 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
CTPS1P17812 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
CTPS1P17812 UBE2L2-201ENST00000254302 429 ntBASIC3.25□□□□□ -1.89
CTPS1P17812 NACAP2-201ENST00000318548 624 ntBASIC3.25□□□□□ -1.89
CTPS1P17812 RNU6-1167P-201ENST00000363227 94 ntBASIC3.25□□□□□ -1.89
CTPS1P17812 RNU6-550P-201ENST00000391057 101 ntBASIC3.25□□□□□ -1.89
CTPS1P17812 RNU2-33P-201ENST00000410344 192 ntBASIC3.25□□□□□ -1.89
CTPS1P17812 RNA5SP293-201ENST00000410527 113 ntBASIC3.25□□□□□ -1.89
CTPS1P17812 RNA5SP229-201ENST00000410809 99 ntBASIC3.25□□□□□ -1.89
CTPS1P17812 RNU4-46P-201ENST00000410818 138 ntBASIC3.25□□□□□ -1.89
CTPS1P17812 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.25□□□□□ -1.89
CTPS1P17812 AC080125.1-201ENST00000414888 684 ntBASIC3.25□□□□□ -1.89
CTPS1P17812 OR6C66P-201ENST00000414917 930 ntBASIC3.25□□□□□ -1.89
CTPS1P17812 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.25□□□□□ -1.89
CTPS1P17812 HMGN1P18-201ENST00000457642 277 ntBASIC3.25□□□□□ -1.89
CTPS1P17812 SNRPFP3-201ENST00000457792 225 ntBASIC3.25□□□□□ -1.89
CTPS1P17812 RPS27P29-201ENST00000463110 252 ntBASIC3.25□□□□□ -1.89
CTPS1P17812 RPL21P8-201ENST00000465083 535 ntBASIC3.25□□□□□ -1.89
CTPS1P17812 RPL39P36-201ENST00000490784 156 ntBASIC3.25□□□□□ -1.89
CTPS1P17812 EIF4EP3-201ENST00000498782 656 ntBASIC3.25□□□□□ -1.89
CTPS1P17812 RNU4-29P-201ENST00000515943 174 ntBASIC3.25□□□□□ -1.89
CTPS1P17812 SNORD60.2-201ENST00000516883 86 ntBASIC3.25□□□□□ -1.89
CTPS1P17812 AC134698.4-201ENST00000523451 826 ntBASIC3.25□□□□□ -1.89
CTPS1P17812 SUB1P1-201ENST00000524415 382 ntBASIC3.25□□□□□ -1.89
CTPS1P17812 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.25□□□□□ -1.89
CTPS1P17812 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.25□□□□□ -1.89
CTPS1P17812 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.25□□□□□ -1.89
CTPS1P17812 MIR5680-201ENST00000577577 84 ntBASIC3.25□□□□□ -1.89
CTPS1P17812 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.25□□□□□ -1.89
CTPS1P17812 AC098826.3-201ENST00000603823 466 ntBASIC3.25□□□□□ -1.89
CTPS1P17812 HSPE1P7-201ENST00000604681 321 ntBASIC3.25□□□□□ -1.89
CTPS1P17812 AC073657.2-201ENST00000605661 303 ntBASIC3.25□□□□□ -1.89
CTPS1P17812 TPTE2P4-201ENST00000258589 1605 ntBASIC3.25□□□□□ -1.89
CTPS1P17812 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CTPS1P17812 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.25□□□□□ -1.89
CTPS1P17812 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CTPS1P17812 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.25□□□□□ -1.89
CTPS1P17812 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CTPS1P17812 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CTPS1P17812 ASNSP3-201ENST00000451989 1306 ntBASIC3.24□□□□□ -1.89
CTPS1P17812 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.24□□□□□ -1.89
CTPS1P17812 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CTPS1P17812 SRP72P2-201ENST00000344851 1979 ntBASIC3.24□□□□□ -1.89
CTPS1P17812 Y_RNA.333-201ENST00000365274 102 ntBASIC3.24□□□□□ -1.89
CTPS1P17812 RNU6-805P-201ENST00000365643 106 ntBASIC3.24□□□□□ -1.89
CTPS1P17812 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CTPS1P17812 MIR325-201ENST00000385260 98 ntBASIC3.24□□□□□ -1.89
CTPS1P17812 CISD1P1-201ENST00000393907 327 ntBASIC3.24□□□□□ -1.89
CTPS1P17812 RNU6-193P-201ENST00000410977 107 ntBASIC3.24□□□□□ -1.89
CTPS1P17812 AL139413.1-201ENST00000421309 217 ntBASIC3.24□□□□□ -1.89
CTPS1P17812 PIGFP3-201ENST00000441918 722 ntBASIC3.24□□□□□ -1.89
CTPS1P17812 MTCO2P3-201ENST00000442543 421 ntBASIC3.24□□□□□ -1.89
CTPS1P17812 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.24□□□□□ -1.89
CTPS1P17812 RPL7P5-201ENST00000471472 736 ntBASIC3.24□□□□□ -1.89
CTPS1P17812 RN7SL442P-201ENST00000473804 320 ntBASIC3.24□□□□□ -1.89
CTPS1P17812 AL160314.1-201ENST00000490836 438 ntBASIC3.24□□□□□ -1.89
CTPS1P17812 AC092185.1-201ENST00000491371 97 ntBASIC3.24□□□□□ -1.89
CTPS1P17812 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.24□□□□□ -1.89
CTPS1P17812 AC006445.2-201ENST00000510061 472 ntBASIC3.24□□□□□ -1.89
CTPS1P17812 RNU6-711P-201ENST00000517255 106 ntBASIC3.24□□□□□ -1.89
CTPS1P17812 TRAV37-201ENST00000553906 342 ntBASIC3.24□□□□□ -1.89
CTPS1P17812 AC037471.2-201ENST00000564941 598 ntBASIC3.24□□□□□ -1.89
CTPS1P17812 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.24□□□□□ -1.89
CTPS1P17812 MIR2682-201ENST00000580305 110 ntBASIC3.24□□□□□ -1.89
CTPS1P17812 AL138889.2-201ENST00000603883 242 ntBASIC3.24□□□□□ -1.89
CTPS1P17812 AL161798.1-201ENST00000604630 131 ntBASIC3.24□□□□□ -1.89
CTPS1P17812 AL670379.4-201ENST00000605279 254 ntBASIC3.24□□□□□ -1.89
CTPS1P17812 RMST_3.1-201ENST00000611651 109 ntBASIC3.24□□□□□ -1.89
CTPS1P17812 MTND4P14-201ENST00000435799 1354 ntBASIC3.24□□□□□ -1.89
CTPS1P17812 AC007785.2-201ENST00000598627 1916 ntBASIC3.23□□□□□ -1.89
CTPS1P17812 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CTPS1P17812 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CTPS1P17812 RNU6-512P-201ENST00000364438 103 ntBASIC3.23□□□□□ -1.89
CTPS1P17812 RNU6-116P-201ENST00000384042 109 ntBASIC3.23□□□□□ -1.89
CTPS1P17812 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CTPS1P17812 U3.19-201ENST00000390893 196 ntBASIC3.23□□□□□ -1.89
CTPS1P17812 AL606923.1-201ENST00000406616 190 ntBASIC3.23□□□□□ -1.89
CTPS1P17812 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.23□□□□□ -1.89
CTPS1P17812 RNA5SP111-201ENST00000411386 101 ntBASIC3.23□□□□□ -1.89
CTPS1P17812 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CTPS1P17812 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.23□□□□□ -1.89
CTPS1P17812 MTCO3P18-201ENST00000440206 761 ntBASIC3.23□□□□□ -1.89
CTPS1P17812 AC104058.1-201ENST00000448028 297 ntBASIC3.23□□□□□ -1.89
CTPS1P17812 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.23□□□□□ -1.89
CTPS1P17812 snoU13.22-201ENST00000459428 104 ntBASIC3.23□□□□□ -1.89
CTPS1P17812 KC877373.1-201ENST00000479066 408 ntBASIC3.23□□□□□ -1.89
CTPS1P17812 AL135752.1-201ENST00000479477 471 ntBASIC3.23□□□□□ -1.89
CTPS1P17812 RPL38P4-201ENST00000502376 214 ntBASIC3.23□□□□□ -1.89
CTPS1P17812 AC110794.1-201ENST00000505816 425 ntBASIC3.23□□□□□ -1.89
CTPS1P17812 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.23□□□□□ -1.89
CTPS1P17812 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CTPS1P17812 SNORA31.1-201ENST00000515993 133 ntBASIC3.23□□□□□ -1.89
CTPS1P17812 SNORA31.5-201ENST00000516190 133 ntBASIC3.23□□□□□ -1.89
CTPS1P17812 RNU6-358P-201ENST00000516564 75 ntBASIC3.23□□□□□ -1.89
CTPS1P17812 RNA5SP380-201ENST00000517190 98 ntBASIC3.23□□□□□ -1.89
CTPS1P17812 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.23□□□□□ -1.89
CTPS1P17812 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.23□□□□□ -1.89
CTPS1P17812 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.23□□□□□ -1.89
CTPS1P17812 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms