Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 RNA5SP246-201ENST00000458909 119 ntBASIC4.09□□□□□ -1.75
COL6A2P12110 RPS23P3-201ENST00000470993 430 ntBASIC4.09□□□□□ -1.75
COL6A2P12110 AC015911.1-201ENST00000495111 156 ntBASIC4.09□□□□□ -1.75
COL6A2P12110 RPL31P61-201ENST00000496160 376 ntBASIC4.09□□□□□ -1.75
COL6A2P12110 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.09□□□□□ -1.75
COL6A2P12110 AC022493.2-201ENST00000506122 481 ntBASIC4.09□□□□□ -1.75
COL6A2P12110 RNU6-764P-201ENST00000516396 105 ntBASIC4.09□□□□□ -1.75
COL6A2P12110 IGLVIV-65-201ENST00000517313 360 ntBASIC4.09□□□□□ -1.75
COL6A2P12110 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC4.09□□□□□ -1.75
COL6A2P12110 TRAV8-5-201ENST00000537369 341 ntBASIC4.09□□□□□ -1.75
COL6A2P12110 OR8R1P-201ENST00000543943 764 ntBASIC4.09□□□□□ -1.75
COL6A2P12110 AC004024.1-201ENST00000549244 247 ntBASIC4.09□□□□□ -1.75
COL6A2P12110 AC010653.1-201ENST00000571108 881 ntBASIC4.09□□□□□ -1.75
COL6A2P12110 AL160281.1-201ENST00000605307 311 ntBASIC4.09□□□□□ -1.75
COL6A2P12110 AL773545.4-201ENST00000637262 310 ntBASIC4.09□□□□□ -1.75
COL6A2P12110 AL513478.4-201ENST00000641636 310 ntBASIC4.09□□□□□ -1.75
COL6A2P12110 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.09□□□□□ -1.75
COL6A2P12110 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
COL6A2P12110 AC139713.2-214ENST00000642059 1811 ntBASIC4.09□□□□□ -1.76
COL6A2P12110 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
COL6A2P12110 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
COL6A2P12110 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
COL6A2P12110 MIR412-201ENST00000362142 91 ntBASIC4.08□□□□□ -1.76
COL6A2P12110 SNORA7.2-201ENST00000364446 145 ntBASIC4.08□□□□□ -1.76
COL6A2P12110 SNORD6-201ENST00000365444 73 ntBASIC4.08□□□□□ -1.76
COL6A2P12110 RNU6-196P-201ENST00000384315 107 ntBASIC4.08□□□□□ -1.76
COL6A2P12110 SNORD73A-201ENST00000386062 65 ntBASIC4.08□□□□□ -1.76
COL6A2P12110 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
COL6A2P12110 AL445529.1-201ENST00000398713 389 ntBASIC4.08□□□□□ -1.76
COL6A2P12110 AL138878.1-201ENST00000405131 347 ntBASIC4.08□□□□□ -1.76
COL6A2P12110 RNU6-1025P-201ENST00000410629 104 ntBASIC4.08□□□□□ -1.76
COL6A2P12110 AL030996.1-201ENST00000411430 235 ntBASIC4.08□□□□□ -1.76
COL6A2P12110 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.08□□□□□ -1.76
COL6A2P12110 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.08□□□□□ -1.76
COL6A2P12110 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC4.08□□□□□ -1.76
COL6A2P12110 RPS29P17-201ENST00000430795 166 ntBASIC4.08□□□□□ -1.76
COL6A2P12110 MYL8P-204ENST00000431574 518 ntBASIC4.08□□□□□ -1.76
COL6A2P12110 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.08□□□□□ -1.76
COL6A2P12110 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.08□□□□□ -1.76
COL6A2P12110 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC4.08□□□□□ -1.76
COL6A2P12110 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.08□□□□□ -1.76
COL6A2P12110 snoU13.1-201ENST00000459157 104 ntBASIC4.08□□□□□ -1.76
COL6A2P12110 RPL21P13-201ENST00000488305 481 ntBASIC4.08□□□□□ -1.76
COL6A2P12110 HMGN1P11-201ENST00000508668 303 ntBASIC4.08□□□□□ -1.76
COL6A2P12110 NDUFB4P9-201ENST00000511646 388 ntBASIC4.08□□□□□ -1.76
COL6A2P12110 MTCO2P24-201ENST00000515611 426 ntBASIC4.08□□□□□ -1.76
COL6A2P12110 Y_RNA.661-201ENST00000516003 99 ntBASIC4.08□□□□□ -1.76
COL6A2P12110 RNA5SP519-201ENST00000516480 119 ntBASIC4.08□□□□□ -1.76
COL6A2P12110 RNU6-1256P-201ENST00000516539 103 ntBASIC4.08□□□□□ -1.76
COL6A2P12110 RNU7-143P-201ENST00000516781 65 ntBASIC4.08□□□□□ -1.76
COL6A2P12110 SNORD116.3-201ENST00000517176 78 ntBASIC4.08□□□□□ -1.76
COL6A2P12110 AC104576.1-201ENST00000524225 88 ntBASIC4.08□□□□□ -1.76
COL6A2P12110 GNAI2P1-201ENST00000541815 315 ntBASIC4.08□□□□□ -1.76
COL6A2P12110 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC4.08□□□□□ -1.76
COL6A2P12110 SUB1P3-201ENST00000564581 315 ntBASIC4.08□□□□□ -1.76
COL6A2P12110 AC093227.2-201ENST00000589357 285 ntBASIC4.08□□□□□ -1.76
COL6A2P12110 AP000787.2-201ENST00000604432 568 ntBASIC4.08□□□□□ -1.76
COL6A2P12110 AC006157.1-201ENST00000611750 366 ntBASIC4.08□□□□□ -1.76
COL6A2P12110 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.08□□□□□ -1.76
COL6A2P12110 AC010205.1-201ENST00000616668 449 ntBASIC4.08□□□□□ -1.76
COL6A2P12110 TTK-211ENST00000627129 240 ntTSL 5 BASIC4.08□□□□□ -1.76
COL6A2P12110 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
COL6A2P12110 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
COL6A2P12110 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
COL6A2P12110 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.07□□□□□ -1.76
COL6A2P12110 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.07□□□□□ -1.76
COL6A2P12110 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
COL6A2P12110 AC126755.2-208ENST00000327792 462 ntBASIC4.07□□□□□ -1.76
COL6A2P12110 AC138969.1-213ENST00000331436 462 ntBASIC4.07□□□□□ -1.76
COL6A2P12110 RNU6-1059P-201ENST00000363752 98 ntBASIC4.07□□□□□ -1.76
COL6A2P12110 Y_RNA.245-201ENST00000364493 95 ntBASIC4.07□□□□□ -1.76
COL6A2P12110 RNA5SP189-201ENST00000364920 115 ntBASIC4.07□□□□□ -1.76
COL6A2P12110 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
COL6A2P12110 MIR568-201ENST00000385036 95 ntBASIC4.07□□□□□ -1.76
COL6A2P12110 RNU2-33P-201ENST00000410344 192 ntBASIC4.07□□□□□ -1.76
COL6A2P12110 RNU6-174P-201ENST00000410406 106 ntBASIC4.07□□□□□ -1.76
COL6A2P12110 Y_RNA.605-201ENST00000410577 105 ntBASIC4.07□□□□□ -1.76
COL6A2P12110 MTCYBP10-201ENST00000424905 650 ntBASIC4.07□□□□□ -1.76
COL6A2P12110 MTCYBP9-201ENST00000431021 303 ntBASIC4.07□□□□□ -1.76
COL6A2P12110 AL133396.1-201ENST00000432048 687 ntBASIC4.07□□□□□ -1.76
COL6A2P12110 AL356535.1-201ENST00000440335 398 ntBASIC4.07□□□□□ -1.76
COL6A2P12110 DAP3P1-201ENST00000441522 278 ntBASIC4.07□□□□□ -1.76
COL6A2P12110 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC4.07□□□□□ -1.76
COL6A2P12110 RPL12P25-201ENST00000455592 494 ntBASIC4.07□□□□□ -1.76
COL6A2P12110 AC008571.1-201ENST00000467232 300 ntBASIC4.07□□□□□ -1.76
COL6A2P12110 AC128713.1-201ENST00000471495 306 ntBASIC4.07□□□□□ -1.76
COL6A2P12110 AC078817.1-201ENST00000492623 435 ntBASIC4.07□□□□□ -1.76
COL6A2P12110 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.07□□□□□ -1.76
COL6A2P12110 AC008958.1-201ENST00000511047 682 ntBASIC4.07□□□□□ -1.76
COL6A2P12110 SNORA70.16-201ENST00000516390 95 ntBASIC4.07□□□□□ -1.76
COL6A2P12110 RNU6-264P-201ENST00000517134 104 ntBASIC4.07□□□□□ -1.76
COL6A2P12110 AC009643.1-201ENST00000532030 391 ntBASIC4.07□□□□□ -1.76
COL6A2P12110 CPDP1-201ENST00000579660 283 ntBASIC4.07□□□□□ -1.76
COL6A2P12110 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.07□□□□□ -1.76
COL6A2P12110 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.07□□□□□ -1.76
COL6A2P12110 AC012531.5-201ENST00000611375 151 ntBASIC4.07□□□□□ -1.76
COL6A2P12110 AC087588.2-201ENST00000617667 426 ntBASIC4.07□□□□□ -1.76
COL6A2P12110 AL162373.1-201ENST00000620433 407 ntBASIC4.07□□□□□ -1.76
COL6A2P12110 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.07□□□□□ -1.76
COL6A2P12110 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 146.4 ms