Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 MIR4276-201ENST00000584832 70 ntBASIC3.2□□□□□ -1.9
PCNAP12004 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.2□□□□□ -1.9
PCNAP12004 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.2□□□□□ -1.9
PCNAP12004 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.2□□□□□ -1.9
PCNAP12004 AC136601.2-201ENST00000604356 474 ntBASIC3.2□□□□□ -1.9
PCNAP12004 AP001486.3-201ENST00000615334 372 ntBASIC3.2□□□□□ -1.9
PCNAP12004 AL359547.2-201ENST00000615810 418 ntBASIC3.2□□□□□ -1.9
PCNAP12004 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
PCNAP12004 FER-210ENST00000628534 558 ntTSL 5 BASIC3.2□□□□□ -1.9
PCNAP12004 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.2□□□□□ -1.9
PCNAP12004 ASNSP3-201ENST00000451989 1306 ntBASIC3.19□□□□□ -1.9
PCNAP12004 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PCNAP12004 AC008264.2-201ENST00000610193 3731 ntBASIC3.19□□□□□ -1.9
PCNAP12004 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
PCNAP12004 MIR148B-201ENST00000362252 99 ntBASIC3.19□□□□□ -1.9
PCNAP12004 RNU6-1283P-201ENST00000365314 105 ntBASIC3.19□□□□□ -1.9
PCNAP12004 SNORD37.1-201ENST00000390968 65 ntBASIC3.19□□□□□ -1.9
PCNAP12004 RPS4XP3-201ENST00000398541 413 ntBASIC3.19□□□□□ -1.9
PCNAP12004 FAT1P1-201ENST00000406588 507 ntBASIC3.19□□□□□ -1.9
PCNAP12004 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.19□□□□□ -1.9
PCNAP12004 RN7SKP111-201ENST00000410349 271 ntBASIC3.19□□□□□ -1.9
PCNAP12004 RNA5SP44-201ENST00000410446 133 ntBASIC3.19□□□□□ -1.9
PCNAP12004 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PCNAP12004 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.19□□□□□ -1.9
PCNAP12004 MTND1P2-201ENST00000430604 821 ntBASIC3.19□□□□□ -1.9
PCNAP12004 GPM6BP2-201ENST00000432046 144 ntBASIC3.19□□□□□ -1.9
PCNAP12004 CST9LP2-201ENST00000437612 320 ntBASIC3.19□□□□□ -1.9
PCNAP12004 SEPT14P3-201ENST00000439401 183 ntBASIC3.19□□□□□ -1.9
PCNAP12004 AL732372.2-207ENST00000445840 183 ntBASIC3.19□□□□□ -1.9
PCNAP12004 GPM6BP1-201ENST00000446387 144 ntBASIC3.19□□□□□ -1.9
PCNAP12004 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.19□□□□□ -1.9
PCNAP12004 CYCSP35-201ENST00000451978 304 ntBASIC3.19□□□□□ -1.9
PCNAP12004 SEPT14P2-201ENST00000453405 183 ntBASIC3.19□□□□□ -1.9
PCNAP12004 FABP5P15-201ENST00000453566 214 ntBASIC3.19□□□□□ -1.9
PCNAP12004 RPL12P25-201ENST00000455592 494 ntBASIC3.19□□□□□ -1.9
PCNAP12004 RPL37P6-201ENST00000460682 294 ntBASIC3.19□□□□□ -1.9
PCNAP12004 AC109927.2-201ENST00000506416 303 ntBASIC3.19□□□□□ -1.9
PCNAP12004 AC009901.1-201ENST00000506703 541 ntBASIC3.19□□□□□ -1.9
PCNAP12004 AC006445.2-201ENST00000510061 472 ntBASIC3.19□□□□□ -1.9
PCNAP12004 SEPT14P4-201ENST00000513445 186 ntBASIC3.19□□□□□ -1.9
PCNAP12004 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.19□□□□□ -1.9
PCNAP12004 RNA5SP291-201ENST00000517222 105 ntBASIC3.19□□□□□ -1.9
PCNAP12004 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.19□□□□□ -1.9
PCNAP12004 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.19□□□□□ -1.9
PCNAP12004 FO082796.1-201ENST00000523795 183 ntBASIC3.19□□□□□ -1.9
PCNAP12004 ATP5F1P5-201ENST00000526403 760 ntBASIC3.19□□□□□ -1.9
PCNAP12004 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.19□□□□□ -1.9
PCNAP12004 DNAJC8P1-201ENST00000554535 372 ntBASIC3.19□□□□□ -1.9
PCNAP12004 AL133241.1-201ENST00000556832 487 ntBASIC3.19□□□□□ -1.9
PCNAP12004 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.19□□□□□ -1.9
PCNAP12004 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.19□□□□□ -1.9
PCNAP12004 AP001094.1-201ENST00000579805 193 ntBASIC3.19□□□□□ -1.9
PCNAP12004 MIR4801-201ENST00000582704 82 ntBASIC3.19□□□□□ -1.9
PCNAP12004 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.19□□□□□ -1.9
PCNAP12004 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.19□□□□□ -1.9
PCNAP12004 AC174048.1-201ENST00000603389 144 ntBASIC3.19□□□□□ -1.9
PCNAP12004 BNIP3P9-201ENST00000603714 553 ntBASIC3.19□□□□□ -1.9
PCNAP12004 HSPE1P7-201ENST00000604681 321 ntBASIC3.19□□□□□ -1.9
PCNAP12004 AC107294.1-201ENST00000609524 467 ntBASIC3.19□□□□□ -1.9
PCNAP12004 uc_338.1-201ENST00000612113 180 ntBASIC3.19□□□□□ -1.9
PCNAP12004 AC006133.1-201ENST00000617106 264 ntBASIC3.19□□□□□ -1.9
PCNAP12004 SNORD39.4-201ENST00000620099 78 ntBASIC3.19□□□□□ -1.9
PCNAP12004 CUL1P1-201ENST00000509510 2425 ntBASIC3.19□□□□□ -1.9
PCNAP12004 AC091564.4-201ENST00000533934 2194 ntBASIC3.18□□□□□ -1.9
PCNAP12004 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.18□□□□□ -1.9
PCNAP12004 NACAP2-201ENST00000318548 624 ntBASIC3.18□□□□□ -1.9
PCNAP12004 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
PCNAP12004 RNU6-451P-201ENST00000362921 107 ntBASIC3.18□□□□□ -1.9
PCNAP12004 MIR490-201ENST00000384865 128 ntBASIC3.18□□□□□ -1.9
PCNAP12004 RN7SKP123-201ENST00000410732 291 ntBASIC3.18□□□□□ -1.9
PCNAP12004 OR9R1P-201ENST00000412200 877 ntBASIC3.18□□□□□ -1.9
PCNAP12004 USP9YP6-201ENST00000413550 854 ntBASIC3.18□□□□□ -1.9
PCNAP12004 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.18□□□□□ -1.9
PCNAP12004 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.18□□□□□ -1.9
PCNAP12004 AL160275.3-201ENST00000423876 471 ntBASIC3.18□□□□□ -1.9
PCNAP12004 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.18□□□□□ -1.9
PCNAP12004 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.18□□□□□ -1.9
PCNAP12004 RBMX2P4-201ENST00000441256 376 ntBASIC3.18□□□□□ -1.9
PCNAP12004 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.18□□□□□ -1.9
PCNAP12004 AC104058.1-201ENST00000448028 297 ntBASIC3.18□□□□□ -1.9
PCNAP12004 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.18□□□□□ -1.9
PCNAP12004 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.18□□□□□ -1.9
PCNAP12004 AC139453.3-201ENST00000493276 369 ntBASIC3.18□□□□□ -1.9
PCNAP12004 EIF4EP3-201ENST00000498782 656 ntBASIC3.18□□□□□ -1.9
PCNAP12004 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.18□□□□□ -1.9
PCNAP12004 AC011611.1-201ENST00000552179 197 ntBASIC3.18□□□□□ -1.9
PCNAP12004 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.18□□□□□ -1.9
PCNAP12004 SNORA59B-202ENST00000578183 701 ntBASIC3.18□□□□□ -1.9
PCNAP12004 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.18□□□□□ -1.9
PCNAP12004 MIR3158-1-201ENST00000583596 81 ntBASIC3.18□□□□□ -1.9
PCNAP12004 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.18□□□□□ -1.9
PCNAP12004 AC004805.2-201ENST00000605382 482 ntBASIC3.18□□□□□ -1.9
PCNAP12004 AC104458.1-201ENST00000608243 463 ntBASIC3.18□□□□□ -1.9
PCNAP12004 RMST_3.1-201ENST00000611651 109 ntBASIC3.18□□□□□ -1.9
PCNAP12004 AL355365.1-201ENST00000616480 294 ntBASIC3.18□□□□□ -1.9
PCNAP12004 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.18□□□□□ -1.9
PCNAP12004 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PCNAP12004 TPTE2P4-201ENST00000258589 1605 ntBASIC3.18□□□□□ -1.9
PCNAP12004 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PCNAP12004 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms