Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.07□□□□□ -1.76
SNRPA1P09661 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.07□□□□□ -1.76
SNRPA1P09661 SNORA23-201ENST00000365128 182 ntBASIC4.07□□□□□ -1.76
SNRPA1P09661 RNU6-946P-201ENST00000383878 107 ntBASIC4.07□□□□□ -1.76
SNRPA1P09661 RNU6-837P-201ENST00000391056 108 ntBASIC4.07□□□□□ -1.76
SNRPA1P09661 snosnR66.1-201ENST00000391095 99 ntBASIC4.07□□□□□ -1.76
SNRPA1P09661 U3.26-201ENST00000391236 204 ntBASIC4.07□□□□□ -1.76
SNRPA1P09661 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.07□□□□□ -1.76
SNRPA1P09661 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.07□□□□□ -1.76
SNRPA1P09661 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.07□□□□□ -1.76
SNRPA1P09661 RPL7P46-201ENST00000425129 740 ntBASIC4.07□□□□□ -1.76
SNRPA1P09661 AC024082.2-201ENST00000434771 238 ntBASIC4.07□□□□□ -1.76
SNRPA1P09661 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.07□□□□□ -1.76
SNRPA1P09661 CST9LP2-201ENST00000437612 320 ntBASIC4.07□□□□□ -1.76
SNRPA1P09661 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.07□□□□□ -1.76
SNRPA1P09661 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.07□□□□□ -1.76
SNRPA1P09661 MTND4P17-201ENST00000470444 350 ntBASIC4.07□□□□□ -1.76
SNRPA1P09661 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.07□□□□□ -1.76
SNRPA1P09661 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.07□□□□□ -1.76
SNRPA1P09661 RPL23AP55-201ENST00000498163 452 ntBASIC4.07□□□□□ -1.76
SNRPA1P09661 RBBP4P6-201ENST00000508098 202 ntBASIC4.07□□□□□ -1.76
SNRPA1P09661 FAM206BP-201ENST00000510179 541 ntBASIC4.07□□□□□ -1.76
SNRPA1P09661 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.07□□□□□ -1.76
SNRPA1P09661 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.07□□□□□ -1.76
SNRPA1P09661 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.07□□□□□ -1.76
SNRPA1P09661 TGIF1P1-201ENST00000558095 802 ntBASIC4.07□□□□□ -1.76
SNRPA1P09661 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.07□□□□□ -1.76
SNRPA1P09661 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.07□□□□□ -1.76
SNRPA1P09661 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.07□□□□□ -1.76
SNRPA1P09661 XIAPP1-201ENST00000603162 600 ntBASIC4.07□□□□□ -1.76
SNRPA1P09661 AC103710.3-201ENST00000608157 948 ntBASIC4.07□□□□□ -1.76
SNRPA1P09661 AC092807.2-201ENST00000609367 243 ntBASIC4.07□□□□□ -1.76
SNRPA1P09661 AC064836.2-201ENST00000609491 462 ntBASIC4.07□□□□□ -1.76
SNRPA1P09661 AC104237.2-201ENST00000612456 443 ntBASIC4.07□□□□□ -1.76
SNRPA1P09661 ATP5A1P2-202ENST00000616464 443 ntBASIC4.07□□□□□ -1.76
SNRPA1P09661 AL160413.1-201ENST00000622780 310 ntBASIC4.07□□□□□ -1.76
SNRPA1P09661 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
SNRPA1P09661 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.07□□□□□ -1.76
SNRPA1P09661 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.07□□□□□ -1.76
SNRPA1P09661 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SNRPA1P09661 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SNRPA1P09661 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
SNRPA1P09661 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SNRPA1P09661 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.06□□□□□ -1.76
SNRPA1P09661 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
SNRPA1P09661 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SNRPA1P09661 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.06□□□□□ -1.76
SNRPA1P09661 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.06□□□□□ -1.76
SNRPA1P09661 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.06□□□□□ -1.76
SNRPA1P09661 Y_RNA.474-201ENST00000384341 102 ntBASIC4.06□□□□□ -1.76
SNRPA1P09661 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
SNRPA1P09661 RPL5P18-201ENST00000406671 891 ntBASIC4.06□□□□□ -1.76
SNRPA1P09661 RNU2-43P-201ENST00000410306 190 ntBASIC4.06□□□□□ -1.76
SNRPA1P09661 RNU2-37P-201ENST00000410695 177 ntBASIC4.06□□□□□ -1.76
SNRPA1P09661 RPL30P2-201ENST00000414021 291 ntBASIC4.06□□□□□ -1.76
SNRPA1P09661 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.06□□□□□ -1.76
SNRPA1P09661 AC090774.1-201ENST00000435925 246 ntBASIC4.06□□□□□ -1.76
SNRPA1P09661 AC020550.1-201ENST00000447385 163 ntBASIC4.06□□□□□ -1.76
SNRPA1P09661 RPL9P32-201ENST00000464118 620 ntBASIC4.06□□□□□ -1.76
SNRPA1P09661 AC092451.1-201ENST00000480211 153 ntBASIC4.06□□□□□ -1.76
SNRPA1P09661 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.06□□□□□ -1.76
SNRPA1P09661 AC117522.3-201ENST00000507974 584 ntBASIC4.06□□□□□ -1.76
SNRPA1P09661 SNORA19.2-201ENST00000516013 114 ntBASIC4.06□□□□□ -1.76
SNRPA1P09661 Y_RNA.691-201ENST00000516611 103 ntBASIC4.06□□□□□ -1.76
SNRPA1P09661 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.06□□□□□ -1.76
SNRPA1P09661 AC022080.3-201ENST00000544433 482 ntBASIC4.06□□□□□ -1.76
SNRPA1P09661 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.06□□□□□ -1.76
SNRPA1P09661 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.06□□□□□ -1.76
SNRPA1P09661 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.06□□□□□ -1.76
SNRPA1P09661 AL670379.6-201ENST00000603753 252 ntBASIC4.06□□□□□ -1.76
SNRPA1P09661 AL670379.11-201ENST00000604059 253 ntBASIC4.06□□□□□ -1.76
SNRPA1P09661 AC008162.1-201ENST00000604718 254 ntBASIC4.06□□□□□ -1.76
SNRPA1P09661 AL670379.1-201ENST00000604752 252 ntBASIC4.06□□□□□ -1.76
SNRPA1P09661 AL670379.5-201ENST00000605253 252 ntBASIC4.06□□□□□ -1.76
SNRPA1P09661 AL670379.12-201ENST00000605291 253 ntBASIC4.06□□□□□ -1.76
SNRPA1P09661 AL670379.8-201ENST00000605353 252 ntBASIC4.06□□□□□ -1.76
SNRPA1P09661 AL670379.7-201ENST00000605823 252 ntBASIC4.06□□□□□ -1.76
SNRPA1P09661 AC093732.2-201ENST00000607950 274 ntBASIC4.06□□□□□ -1.76
SNRPA1P09661 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.06□□□□□ -1.76
SNRPA1P09661 uc_338.11-201ENST00000619132 160 ntBASIC4.06□□□□□ -1.76
SNRPA1P09661 AC099506.2-201ENST00000623074 221 ntBASIC4.06□□□□□ -1.76
SNRPA1P09661 AC006386.2-201ENST00000624491 75 ntBASIC4.06□□□□□ -1.76
SNRPA1P09661 AC012005.1-201ENST00000624575 75 ntBASIC4.06□□□□□ -1.76
SNRPA1P09661 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.06□□□□□ -1.76
SNRPA1P09661 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.06□□□□□ -1.76
SNRPA1P09661 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SNRPA1P09661 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.05□□□□□ -1.76
SNRPA1P09661 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
SNRPA1P09661 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SNRPA1P09661 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SNRPA1P09661 MIR30E-201ENST00000362104 92 ntBASIC4.05□□□□□ -1.76
SNRPA1P09661 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SNRPA1P09661 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SNRPA1P09661 RNU6-550P-201ENST00000391057 101 ntBASIC4.05□□□□□ -1.76
SNRPA1P09661 AC110754.1-201ENST00000399740 601 ntBASIC4.05□□□□□ -1.76
SNRPA1P09661 NDUFS5P1-201ENST00000405668 289 ntBASIC4.05□□□□□ -1.76
SNRPA1P09661 AL354751.2-201ENST00000415471 210 ntBASIC4.05□□□□□ -1.76
SNRPA1P09661 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.05□□□□□ -1.76
SNRPA1P09661 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.05□□□□□ -1.76
SNRPA1P09661 COTL1P1-201ENST00000422309 375 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms