Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.96□□□□□ -2.25
TNFP01375 RNU6-1-201ENST00000383898 107 ntBASIC0.96□□□□□ -2.26
TNFP01375 RNU6-217P-201ENST00000384164 104 ntBASIC0.96□□□□□ -2.26
TNFP01375 RNU6-42P-201ENST00000384165 107 ntBASIC0.96□□□□□ -2.26
TNFP01375 RNU6-36P-201ENST00000384172 107 ntBASIC0.96□□□□□ -2.26
TNFP01375 RNU6-4P-201ENST00000384205 107 ntBASIC0.96□□□□□ -2.26
TNFP01375 RNU6-5P-201ENST00000384238 107 ntBASIC0.96□□□□□ -2.26
TNFP01375 RNU6-3P-201ENST00000384314 107 ntBASIC0.96□□□□□ -2.26
TNFP01375 SNORD51-201ENST00000384320 80 ntBASIC0.96□□□□□ -2.26
TNFP01375 RNU6-2-201ENST00000384627 107 ntBASIC0.96□□□□□ -2.26
TNFP01375 RNU6-9-201ENST00000384776 107 ntBASIC0.96□□□□□ -2.26
TNFP01375 RNU6-33P-201ENST00000384793 107 ntBASIC0.96□□□□□ -2.26
TNFP01375 MIR513A1-201ENST00000385138 129 ntBASIC0.96□□□□□ -2.26
TNFP01375 RNU2-43P-201ENST00000410306 190 ntBASIC0.96□□□□□ -2.26
TNFP01375 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.96□□□□□ -2.26
TNFP01375 RPL21P90-201ENST00000415692 466 ntBASIC0.96□□□□□ -2.26
TNFP01375 MRPL35P3-201ENST00000421557 364 ntBASIC0.96□□□□□ -2.26
TNFP01375 EIF4EP2-201ENST00000422816 654 ntBASIC0.96□□□□□ -2.26
TNFP01375 RPP40P1-201ENST00000426762 456 ntBASIC0.96□□□□□ -2.26
TNFP01375 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.96□□□□□ -2.26
TNFP01375 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.96□□□□□ -2.26
TNFP01375 FABP5P14-201ENST00000437273 393 ntBASIC0.96□□□□□ -2.26
TNFP01375 RPL26P6-201ENST00000440913 438 ntBASIC0.96□□□□□ -2.26
TNFP01375 SNORD97-201ENST00000459187 142 ntBASIC0.96□□□□□ -2.26
TNFP01375 AL121594.1-201ENST00000475906 575 ntBASIC0.96□□□□□ -2.26
TNFP01375 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
TNFP01375 RNU6-1256P-201ENST00000516539 103 ntBASIC0.96□□□□□ -2.26
TNFP01375 AC011604.1-201ENST00000545978 196 ntBASIC0.96□□□□□ -2.26
TNFP01375 AC124947.2-202ENST00000552735 133 ntBASIC0.96□□□□□ -2.26
TNFP01375 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC0.96□□□□□ -2.26
TNFP01375 AC023825.1-201ENST00000566704 1030 ntBASIC0.96□□□□□ -2.26
TNFP01375 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC0.96□□□□□ -2.26
TNFP01375 RNU6-6P-201ENST00000606623 107 ntBASIC0.96□□□□□ -2.26
TNFP01375 AL121652.1-201ENST00000608851 448 ntBASIC0.96□□□□□ -2.26
TNFP01375 MIR6767-201ENST00000637302 66 ntBASIC0.96□□□□□ -2.26
TNFP01375 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC0.96□□□□□ -2.26
TNFP01375 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.95□□□□□ -2.26
TNFP01375 Y_RNA.67-201ENST00000362870 100 ntBASIC0.95□□□□□ -2.26
TNFP01375 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.95□□□□□ -2.26
TNFP01375 TXNP7-201ENST00000406296 293 ntBASIC0.95□□□□□ -2.26
TNFP01375 HMGN1P14-201ENST00000412459 517 ntBASIC0.95□□□□□ -2.26
TNFP01375 AL449283.1-202ENST00000418249 604 ntBASIC0.95□□□□□ -2.26
TNFP01375 TOMM22P2-201ENST00000430735 237 ntBASIC0.95□□□□□ -2.26
TNFP01375 RSU1P2-202ENST00000437884 485 ntBASIC0.95□□□□□ -2.26
TNFP01375 THAP5P1-201ENST00000439089 262 ntBASIC0.95□□□□□ -2.26
TNFP01375 AC079448.1-201ENST00000449377 373 ntBASIC0.95□□□□□ -2.26
TNFP01375 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC0.95□□□□□ -2.26
TNFP01375 RPS29P1-201ENST00000465274 159 ntBASIC0.95□□□□□ -2.26
TNFP01375 AC093767.1-201ENST00000504523 156 ntBASIC0.95□□□□□ -2.26
TNFP01375 FABP5P5-201ENST00000515537 406 ntBASIC0.95□□□□□ -2.26
TNFP01375 RNA5SP112-201ENST00000515937 99 ntBASIC0.95□□□□□ -2.26
TNFP01375 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC0.95□□□□□ -2.26
TNFP01375 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.95□□□□□ -2.26
TNFP01375 AC109446.2-201ENST00000567872 497 ntBASIC0.95□□□□□ -2.26
TNFP01375 ABBA01006766.1-201ENST00000584728 294 ntBASIC0.95□□□□□ -2.26
TNFP01375 AC007349.4-201ENST00000608114 532 ntBASIC0.95□□□□□ -2.26
TNFP01375 AC009974.1-201ENST00000608881 455 ntBASIC0.95□□□□□ -2.26
TNFP01375 MIR6857-201ENST00000613267 93 ntBASIC0.95□□□□□ -2.26
TNFP01375 MIR6734-201ENST00000621166 68 ntBASIC0.95□□□□□ -2.26
TNFP01375 MIR3199-2-201ENST00000636243 86 ntBASIC0.95□□□□□ -2.26
TNFP01375 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC0.95□□□□□ -2.26
TNFP01375 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
TNFP01375 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC0.94□□□□□ -2.26
TNFP01375 RNU6-486P-201ENST00000363116 107 ntBASIC0.94□□□□□ -2.26
TNFP01375 RNU6-1032P-201ENST00000384100 107 ntBASIC0.94□□□□□ -2.26
TNFP01375 RNY1P14-201ENST00000384426 108 ntBASIC0.94□□□□□ -2.26
TNFP01375 MIR532-201ENST00000385025 91 ntBASIC0.94□□□□□ -2.26
TNFP01375 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.94□□□□□ -2.26
TNFP01375 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC0.94□□□□□ -2.26
TNFP01375 AC092047.1-201ENST00000424997 240 ntBASIC0.94□□□□□ -2.26
TNFP01375 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.94□□□□□ -2.26
TNFP01375 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC0.94□□□□□ -2.26
TNFP01375 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC0.94□□□□□ -2.26
TNFP01375 AL078601.1-201ENST00000444542 271 ntBASIC0.94□□□□□ -2.26
TNFP01375 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC0.94□□□□□ -2.26
TNFP01375 RPS27P1-201ENST00000450552 247 ntBASIC0.94□□□□□ -2.26
TNFP01375 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC0.94□□□□□ -2.26
TNFP01375 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.94□□□□□ -2.26
TNFP01375 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC0.94□□□□□ -2.26
TNFP01375 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC0.94□□□□□ -2.26
TNFP01375 VN1R107P-201ENST00000601784 209 ntBASIC0.94□□□□□ -2.26
TNFP01375 AL161729.4-201ENST00000604650 476 ntBASIC0.94□□□□□ -2.26
TNFP01375 AC083806.3-201ENST00000614016 455 ntBASIC0.94□□□□□ -2.26
TNFP01375 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.94□□□□□ -2.26
TNFP01375 Y_RNA.796-201ENST00000364268 102 ntBASIC0.93□□□□□ -2.26
TNFP01375 Y_RNA.799-201ENST00000364992 102 ntBASIC0.93□□□□□ -2.26
TNFP01375 RNA5SP240-201ENST00000365355 128 ntBASIC0.93□□□□□ -2.26
TNFP01375 AL590233.1-201ENST00000430017 456 ntBASIC0.93□□□□□ -2.26
TNFP01375 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.93□□□□□ -2.26
TNFP01375 Z82210.1-201ENST00000440037 231 ntBASIC0.93□□□□□ -2.26
TNFP01375 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.93□□□□□ -2.26
TNFP01375 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.93□□□□□ -2.26
TNFP01375 snoU13.18-201ENST00000459483 104 ntBASIC0.93□□□□□ -2.26
TNFP01375 AL049874.1-201ENST00000489560 388 ntBASIC0.93□□□□□ -2.26
TNFP01375 AC099513.1-201ENST00000490423 301 ntBASIC0.93□□□□□ -2.26
TNFP01375 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.93□□□□□ -2.26
TNFP01375 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
TNFP01375 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC0.93□□□□□ -2.26
TNFP01375 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.93□□□□□ -2.26
TNFP01375 AP005660.1-201ENST00000522972 293 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms