Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.84□□□□□ -2.11
VAPBO95292 AC003989.2-201ENST00000440224 169 ntBASIC1.84□□□□□ -2.11
VAPBO95292 MTND1P16-201ENST00000465177 898 ntBASIC1.84□□□□□ -2.11
VAPBO95292 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1.84□□□□□ -2.11
VAPBO95292 AC034222.1-201ENST00000494052 532 ntBASIC1.84□□□□□ -2.11
VAPBO95292 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC1.84□□□□□ -2.11
VAPBO95292 RN7SKP258-201ENST00000517151 304 ntBASIC1.84□□□□□ -2.11
VAPBO95292 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.84□□□□□ -2.11
VAPBO95292 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.84□□□□□ -2.11
VAPBO95292 BNIP3P26-201ENST00000600827 554 ntBASIC1.84□□□□□ -2.11
VAPBO95292 AC068790.3-201ENST00000602988 553 ntBASIC1.84□□□□□ -2.11
VAPBO95292 AC087241.4-201ENST00000612441 480 ntBASIC1.84□□□□□ -2.11
VAPBO95292 AC091932.3-201ENST00000624223 323 ntBASIC1.84□□□□□ -2.11
VAPBO95292 PCMTD1P7-201ENST00000634506 357 ntBASIC1.84□□□□□ -2.11
VAPBO95292 AC097655.1-201ENST00000635075 318 ntBASIC1.84□□□□□ -2.11
VAPBO95292 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.84□□□□□ -2.12
VAPBO95292 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
VAPBO95292 NACAP2-201ENST00000318548 624 ntBASIC1.83□□□□□ -2.12
VAPBO95292 RNU4-51P-201ENST00000364206 140 ntBASIC1.83□□□□□ -2.12
VAPBO95292 RNU6-748P-201ENST00000384648 107 ntBASIC1.83□□□□□ -2.12
VAPBO95292 AC097463.2-201ENST00000421074 142 ntBASIC1.83□□□□□ -2.12
VAPBO95292 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.83□□□□□ -2.12
VAPBO95292 RPL23AP76-201ENST00000441860 458 ntBASIC1.83□□□□□ -2.12
VAPBO95292 AC093281.2-201ENST00000510153 597 ntBASIC1.83□□□□□ -2.12
VAPBO95292 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.83□□□□□ -2.12
VAPBO95292 AL133153.1-201ENST00000557756 303 ntBASIC1.83□□□□□ -2.12
VAPBO95292 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.83□□□□□ -2.12
VAPBO95292 VN1R83P-201ENST00000595685 445 ntBASIC1.83□□□□□ -2.12
VAPBO95292 AL158211.2-201ENST00000607282 395 ntBASIC1.83□□□□□ -2.12
VAPBO95292 AF129408.1-201ENST00000608767 431 ntBASIC1.83□□□□□ -2.12
VAPBO95292 AL627230.6-201ENST00000611129 280 ntBASIC1.83□□□□□ -2.12
VAPBO95292 AP000676.3-201ENST00000623299 569 ntBASIC1.83□□□□□ -2.12
VAPBO95292 AC126544.2-201ENST00000625174 749 ntBASIC1.83□□□□□ -2.12
VAPBO95292 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.83□□□□□ -2.12
VAPBO95292 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.82□□□□□ -2.12
VAPBO95292 AC008555.8-201ENST00000623602 2168 ntBASIC1.82□□□□□ -2.12
VAPBO95292 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
VAPBO95292 AC092881.1-201ENST00000638218 2733 ntBASIC1.82□□□□□ -2.12
VAPBO95292 UBE2L2-201ENST00000254302 429 ntBASIC1.82□□□□□ -2.12
VAPBO95292 RNU6-512P-201ENST00000364438 103 ntBASIC1.82□□□□□ -2.12
VAPBO95292 AL512604.1-201ENST00000404812 257 ntBASIC1.82□□□□□ -2.12
VAPBO95292 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.82□□□□□ -2.12
VAPBO95292 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
VAPBO95292 MTATP6P30-201ENST00000443540 664 ntBASIC1.82□□□□□ -2.12
VAPBO95292 AC092001.1-201ENST00000453012 261 ntBASIC1.82□□□□□ -2.12
VAPBO95292 FABP5P15-201ENST00000453566 214 ntBASIC1.82□□□□□ -2.12
VAPBO95292 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.82□□□□□ -2.12
VAPBO95292 RPL23AP94-201ENST00000512518 302 ntBASIC1.82□□□□□ -2.12
VAPBO95292 SNORA25.11-201ENST00000515935 105 ntBASIC1.82□□□□□ -2.12
VAPBO95292 RNU6-703P-201ENST00000516946 107 ntBASIC1.82□□□□□ -2.12
VAPBO95292 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.82□□□□□ -2.12
VAPBO95292 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.82□□□□□ -2.12
VAPBO95292 AC110588.1-201ENST00000559699 137 ntBASIC1.82□□□□□ -2.12
VAPBO95292 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.82□□□□□ -2.12
VAPBO95292 MIR4419B-201ENST00000577260 68 ntBASIC1.82□□□□□ -2.12
VAPBO95292 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.82□□□□□ -2.12
VAPBO95292 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.82□□□□□ -2.12
VAPBO95292 AL158163.2-201ENST00000619110 700 ntBASIC1.82□□□□□ -2.12
VAPBO95292 AC091953.2-201ENST00000623979 160 ntBASIC1.82□□□□□ -2.12
VAPBO95292 U6.99-201ENST00000637524 83 ntBASIC1.82□□□□□ -2.12
VAPBO95292 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.82□□□□□ -2.12
VAPBO95292 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
VAPBO95292 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
VAPBO95292 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.81□□□□□ -2.12
VAPBO95292 RNU6-1159P-201ENST00000362933 107 ntBASIC1.81□□□□□ -2.12
VAPBO95292 RNA5SP126-201ENST00000365092 109 ntBASIC1.81□□□□□ -2.12
VAPBO95292 SNORA70B-201ENST00000384210 135 ntBASIC1.81□□□□□ -2.12
VAPBO95292 RNU4-26P-201ENST00000410270 107 ntBASIC1.81□□□□□ -2.12
VAPBO95292 AL160275.3-201ENST00000423876 471 ntBASIC1.81□□□□□ -2.12
VAPBO95292 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.81□□□□□ -2.12
VAPBO95292 ISCA1P1-201ENST00000426679 387 ntBASIC1.81□□□□□ -2.12
VAPBO95292 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.81□□□□□ -2.12
VAPBO95292 DNAJC19P4-201ENST00000440115 345 ntBASIC1.81□□□□□ -2.12
VAPBO95292 MTCO1P53-201ENST00000441633 699 ntBASIC1.81□□□□□ -2.12
VAPBO95292 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.81□□□□□ -2.12
VAPBO95292 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.81□□□□□ -2.12
VAPBO95292 OR6C5P-201ENST00000452388 923 ntBASIC1.81□□□□□ -2.12
VAPBO95292 RNU7-59P-201ENST00000459101 61 ntBASIC1.81□□□□□ -2.12
VAPBO95292 AC018437.1-201ENST00000492214 406 ntBASIC1.81□□□□□ -2.12
VAPBO95292 AC107393.1-201ENST00000512403 346 ntBASIC1.81□□□□□ -2.12
VAPBO95292 AC008837.2-201ENST00000513076 418 ntBASIC1.81□□□□□ -2.12
VAPBO95292 RNU6-581P-201ENST00000516214 105 ntBASIC1.81□□□□□ -2.12
VAPBO95292 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC1.81□□□□□ -2.12
VAPBO95292 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.81□□□□□ -2.12
VAPBO95292 AC007375.1-201ENST00000554513 578 ntBASIC1.81□□□□□ -2.12
VAPBO95292 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.81□□□□□ -2.12
VAPBO95292 MTND3P13-201ENST00000574391 343 ntBASIC1.81□□□□□ -2.12
VAPBO95292 AC068620.3-201ENST00000602749 560 ntBASIC1.81□□□□□ -2.12
VAPBO95292 AC021171.1-201ENST00000603137 706 ntBASIC1.81□□□□□ -2.12
VAPBO95292 RPL21P136-201ENST00000605378 396 ntBASIC1.81□□□□□ -2.12
VAPBO95292 AC007038.2-201ENST00000608095 740 ntBASIC1.81□□□□□ -2.12
VAPBO95292 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.81□□□□□ -2.12
VAPBO95292 AC092574.1-201ENST00000609771 420 ntBASIC1.81□□□□□ -2.12
VAPBO95292 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.81□□□□□ -2.12
VAPBO95292 AC009233.1-201ENST00000616477 371 ntBASIC1.81□□□□□ -2.12
VAPBO95292 AC123767.1-202ENST00000620407 817 ntBASIC1.81□□□□□ -2.12
VAPBO95292 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.81□□□□□ -2.12
VAPBO95292 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
VAPBO95292 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.81□□□□□ -2.12
VAPBO95292 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms