Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 Y_RNA.22-201ENST00000362492 102 ntBASIC3.3□□□□□ -1.88
MBD4O95243 RNU6-750P-201ENST00000390946 107 ntBASIC3.3□□□□□ -1.88
MBD4O95243 SNORA26.7-201ENST00000391288 122 ntBASIC3.3□□□□□ -1.88
MBD4O95243 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
MBD4O95243 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.3□□□□□ -1.88
MBD4O95243 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.3□□□□□ -1.88
MBD4O95243 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.3□□□□□ -1.88
MBD4O95243 AL139281.1-201ENST00000422120 335 ntBASIC3.3□□□□□ -1.88
MBD4O95243 RPL7P37-201ENST00000425095 738 ntBASIC3.3□□□□□ -1.88
MBD4O95243 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.3□□□□□ -1.88
MBD4O95243 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.3□□□□□ -1.88
MBD4O95243 KATNBL1P3-201ENST00000443475 909 ntBASIC3.3□□□□□ -1.88
MBD4O95243 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.3□□□□□ -1.88
MBD4O95243 AC079781.2-201ENST00000446424 169 ntBASIC3.3□□□□□ -1.88
MBD4O95243 AC108938.1-201ENST00000451204 136 ntBASIC3.3□□□□□ -1.88
MBD4O95243 RPS26P21-201ENST00000475397 348 ntBASIC3.3□□□□□ -1.88
MBD4O95243 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.3□□□□□ -1.88
MBD4O95243 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.3□□□□□ -1.88
MBD4O95243 ARL2BPP4-201ENST00000506854 471 ntBASIC3.3□□□□□ -1.88
MBD4O95243 AC117522.3-201ENST00000507974 584 ntBASIC3.3□□□□□ -1.88
MBD4O95243 AC108078.2-201ENST00000510750 236 ntBASIC3.3□□□□□ -1.88
MBD4O95243 SCARNA24.1-201ENST00000516465 137 ntBASIC3.3□□□□□ -1.88
MBD4O95243 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.3□□□□□ -1.88
MBD4O95243 AC007536.1-201ENST00000533382 349 ntBASIC3.3□□□□□ -1.88
MBD4O95243 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.3□□□□□ -1.88
MBD4O95243 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.3□□□□□ -1.88
MBD4O95243 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.3□□□□□ -1.88
MBD4O95243 AC010620.1-201ENST00000601088 1102 ntBASIC3.3□□□□□ -1.88
MBD4O95243 MIR15A-201ENST00000607334 83 ntBASIC3.3□□□□□ -1.88
MBD4O95243 AC138649.3-201ENST00000622154 254 ntBASIC3.3□□□□□ -1.88
MBD4O95243 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
MBD4O95243 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
MBD4O95243 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
MBD4O95243 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
MBD4O95243 AC062016.1-201ENST00000355719 319 ntBASIC3.29□□□□□ -1.88
MBD4O95243 SNORD116-9-201ENST00000384000 95 ntBASIC3.29□□□□□ -1.88
MBD4O95243 SNORD116-2-201ENST00000384274 95 ntBASIC3.29□□□□□ -1.88
MBD4O95243 SNORD116-3-201ENST00000384287 95 ntBASIC3.29□□□□□ -1.88
MBD4O95243 SNORD116-7-201ENST00000384404 95 ntBASIC3.29□□□□□ -1.88
MBD4O95243 SNORD116-5-201ENST00000384462 95 ntBASIC3.29□□□□□ -1.88
MBD4O95243 SNORD116-6-201ENST00000384711 96 ntBASIC3.29□□□□□ -1.88
MBD4O95243 RNU2-52P-201ENST00000410680 190 ntBASIC3.29□□□□□ -1.88
MBD4O95243 RNA5SP21-201ENST00000410917 96 ntBASIC3.29□□□□□ -1.88
MBD4O95243 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.29□□□□□ -1.88
MBD4O95243 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.29□□□□□ -1.88
MBD4O95243 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.29□□□□□ -1.88
MBD4O95243 GPR143P-201ENST00000434155 205 ntBASIC3.29□□□□□ -1.88
MBD4O95243 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.29□□□□□ -1.88
MBD4O95243 AC003071.1-201ENST00000451219 789 ntBASIC3.29□□□□□ -1.88
MBD4O95243 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.29□□□□□ -1.88
MBD4O95243 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.29□□□□□ -1.88
MBD4O95243 MRPS36P2-201ENST00000512569 299 ntBASIC3.29□□□□□ -1.88
MBD4O95243 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.29□□□□□ -1.88
MBD4O95243 RNU6-1220P-201ENST00000517126 108 ntBASIC3.29□□□□□ -1.88
MBD4O95243 AC090572.1-201ENST00000519251 160 ntBASIC3.29□□□□□ -1.88
MBD4O95243 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.29□□□□□ -1.88
MBD4O95243 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
MBD4O95243 ADI1P3-201ENST00000549509 470 ntBASIC3.29□□□□□ -1.88
MBD4O95243 AL157871.3-201ENST00000557231 293 ntBASIC3.29□□□□□ -1.88
MBD4O95243 AC007938.3-201ENST00000604965 623 ntBASIC3.29□□□□□ -1.88
MBD4O95243 MIR98-201ENST00000606724 119 ntBASIC3.29□□□□□ -1.88
MBD4O95243 AC135507.1-201ENST00000607214 561 ntBASIC3.29□□□□□ -1.88
MBD4O95243 AC012409.4-201ENST00000612923 249 ntBASIC3.29□□□□□ -1.88
MBD4O95243 AC072046.2-201ENST00000618366 268 ntBASIC3.29□□□□□ -1.88
MBD4O95243 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.29□□□□□ -1.88
MBD4O95243 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.29□□□□□ -1.88
MBD4O95243 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.29□□□□□ -1.88
MBD4O95243 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
MBD4O95243 AC103710.2-202ENST00000641454 2853 ntBASIC3.29□□□□□ -1.88
MBD4O95243 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.29□□□□□ -1.88
MBD4O95243 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.29□□□□□ -1.88
MBD4O95243 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.28□□□□□ -1.88
MBD4O95243 MTND5P19-201ENST00000424872 1794 ntBASIC3.28□□□□□ -1.88
MBD4O95243 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
MBD4O95243 RNA5SP344-201ENST00000411081 104 ntBASIC3.28□□□□□ -1.88
MBD4O95243 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.28□□□□□ -1.88
MBD4O95243 RPL31P35-201ENST00000431058 377 ntBASIC3.28□□□□□ -1.88
MBD4O95243 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.28□□□□□ -1.88
MBD4O95243 AC244505.4-201ENST00000434905 287 ntBASIC3.28□□□□□ -1.88
MBD4O95243 SETP8-201ENST00000435341 628 ntBASIC3.28□□□□□ -1.88
MBD4O95243 SSXP5-201ENST00000443473 287 ntBASIC3.28□□□□□ -1.88
MBD4O95243 USP9YP29-201ENST00000445112 563 ntBASIC3.28□□□□□ -1.88
MBD4O95243 Z96811.1-201ENST00000445880 108 ntBASIC3.28□□□□□ -1.88
MBD4O95243 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
MBD4O95243 Z83846.1-201ENST00000446798 265 ntBASIC3.28□□□□□ -1.88
MBD4O95243 HMGN2P10-201ENST00000448085 265 ntBASIC3.28□□□□□ -1.88
MBD4O95243 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.28□□□□□ -1.88
MBD4O95243 SNORD109B-201ENST00000458961 67 ntBASIC3.28□□□□□ -1.88
MBD4O95243 SNORD109A-201ENST00000459128 67 ntBASIC3.28□□□□□ -1.88
MBD4O95243 SNORA59A-201ENST00000459326 152 ntBASIC3.28□□□□□ -1.88
MBD4O95243 AC126389.1-201ENST00000477436 290 ntBASIC3.28□□□□□ -1.88
MBD4O95243 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.28□□□□□ -1.88
MBD4O95243 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.28□□□□□ -1.88
MBD4O95243 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.28□□□□□ -1.88
MBD4O95243 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.28□□□□□ -1.88
MBD4O95243 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.28□□□□□ -1.88
MBD4O95243 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.28□□□□□ -1.88
MBD4O95243 MIR1273C-201ENST00000578669 77 ntBASIC3.28□□□□□ -1.88
MBD4O95243 AC005046.1-201ENST00000608515 625 ntBASIC3.28□□□□□ -1.88
MBD4O95243 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms