Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 SNORD116.1-201ENST00000365628 92 ntBASIC1.76□□□□□ -2.13
UPK1AO00322 RNU6-19P-201ENST00000384718 107 ntBASIC1.76□□□□□ -2.13
UPK1AO00322 RNU6-278P-201ENST00000390945 109 ntBASIC1.76□□□□□ -2.13
UPK1AO00322 SNORD23.1-201ENST00000408212 104 ntBASIC1.76□□□□□ -2.13
UPK1AO00322 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.76□□□□□ -2.13
UPK1AO00322 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.76□□□□□ -2.13
UPK1AO00322 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.76□□□□□ -2.13
UPK1AO00322 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.76□□□□□ -2.13
UPK1AO00322 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.76□□□□□ -2.13
UPK1AO00322 AL161651.1-201ENST00000440882 223 ntBASIC1.76□□□□□ -2.13
UPK1AO00322 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.76□□□□□ -2.13
UPK1AO00322 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.76□□□□□ -2.13
UPK1AO00322 FABP5P13-201ENST00000452144 328 ntBASIC1.76□□□□□ -2.13
UPK1AO00322 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.76□□□□□ -2.13
UPK1AO00322 PPP1R2P5-201ENST00000457256 603 ntBASIC1.76□□□□□ -2.13
UPK1AO00322 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.76□□□□□ -2.13
UPK1AO00322 AC026801.1-201ENST00000497178 464 ntBASIC1.76□□□□□ -2.13
UPK1AO00322 AC021146.8-201ENST00000507455 733 ntBASIC1.76□□□□□ -2.13
UPK1AO00322 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.76□□□□□ -2.13
UPK1AO00322 AL121821.2-201ENST00000556081 394 ntBASIC1.76□□□□□ -2.13
UPK1AO00322 AC023813.2-201ENST00000564321 469 ntBASIC1.76□□□□□ -2.13
UPK1AO00322 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
UPK1AO00322 AC105245.1-201ENST00000581934 244 ntBASIC1.76□□□□□ -2.13
UPK1AO00322 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.76□□□□□ -2.13
UPK1AO00322 AC091057.3-201ENST00000602684 733 ntBASIC1.76□□□□□ -2.13
UPK1AO00322 AC069431.2-201ENST00000604149 1099 ntBASIC1.76□□□□□ -2.13
UPK1AO00322 uc_338.14-201ENST00000613162 166 ntBASIC1.76□□□□□ -2.13
UPK1AO00322 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.76□□□□□ -2.13
UPK1AO00322 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.76□□□□□ -2.13
UPK1AO00322 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.76□□□□□ -2.13
UPK1AO00322 AC004944.1-201ENST00000517807 3059 ntBASIC1.76□□□□□ -2.13
UPK1AO00322 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
UPK1AO00322 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.76□□□□□ -2.13
UPK1AO00322 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
UPK1AO00322 SNORA3A-201ENST00000364113 130 ntBASIC1.75□□□□□ -2.13
UPK1AO00322 RNU6-512P-201ENST00000364438 103 ntBASIC1.75□□□□□ -2.13
UPK1AO00322 MIR19A-201ENST00000384878 82 ntBASIC1.75□□□□□ -2.13
UPK1AO00322 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
UPK1AO00322 SNORA46.1-201ENST00000391069 153 ntBASIC1.75□□□□□ -2.13
UPK1AO00322 AL359634.1-202ENST00000404721 284 ntBASIC1.75□□□□□ -2.13
UPK1AO00322 GSTA9P-201ENST00000406231 611 ntBASIC1.75□□□□□ -2.13
UPK1AO00322 RN7SKP266-201ENST00000410232 287 ntBASIC1.75□□□□□ -2.13
UPK1AO00322 RNU4-26P-201ENST00000410270 107 ntBASIC1.75□□□□□ -2.13
UPK1AO00322 VN1R51P-201ENST00000411675 945 ntBASIC1.75□□□□□ -2.13
UPK1AO00322 AL109913.1-201ENST00000421173 514 ntBASIC1.75□□□□□ -2.13
UPK1AO00322 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.75□□□□□ -2.13
UPK1AO00322 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.75□□□□□ -2.13
UPK1AO00322 PTGES3P4-201ENST00000426243 356 ntBASIC1.75□□□□□ -2.13
UPK1AO00322 RPL30P4-201ENST00000429309 333 ntBASIC1.75□□□□□ -2.13
UPK1AO00322 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.75□□□□□ -2.13
UPK1AO00322 HMGN2P10-201ENST00000448085 265 ntBASIC1.75□□□□□ -2.13
UPK1AO00322 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.75□□□□□ -2.13
UPK1AO00322 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.75□□□□□ -2.13
UPK1AO00322 AL441985.1-201ENST00000457727 251 ntBASIC1.75□□□□□ -2.13
UPK1AO00322 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.75□□□□□ -2.13
UPK1AO00322 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.75□□□□□ -2.13
UPK1AO00322 AC080013.2-201ENST00000460866 323 ntBASIC1.75□□□□□ -2.13
UPK1AO00322 DYNLL1P5-201ENST00000467158 270 ntBASIC1.75□□□□□ -2.13
UPK1AO00322 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
UPK1AO00322 AC072039.1-201ENST00000477611 581 ntBASIC1.75□□□□□ -2.13
UPK1AO00322 RPL23AP41-201ENST00000484754 458 ntBASIC1.75□□□□□ -2.13
UPK1AO00322 AC007182.2-201ENST00000489251 402 ntBASIC1.75□□□□□ -2.13
UPK1AO00322 MTCYBP43-201ENST00000513621 740 ntBASIC1.75□□□□□ -2.13
UPK1AO00322 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.75□□□□□ -2.13
UPK1AO00322 CYCSP26-201ENST00000534107 320 ntBASIC1.75□□□□□ -2.13
UPK1AO00322 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.75□□□□□ -2.13
UPK1AO00322 AC006199.1-201ENST00000548728 219 ntBASIC1.75□□□□□ -2.13
UPK1AO00322 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.75□□□□□ -2.13
UPK1AO00322 AC068790.3-201ENST00000602988 553 ntBASIC1.75□□□□□ -2.13
UPK1AO00322 RPP40P2-201ENST00000603596 712 ntBASIC1.75□□□□□ -2.13
UPK1AO00322 MTND3P19-201ENST00000603825 345 ntBASIC1.75□□□□□ -2.13
UPK1AO00322 AL450336.1-201ENST00000605180 586 ntBASIC1.75□□□□□ -2.13
UPK1AO00322 PISRT1-201ENST00000626175 531 ntBASIC1.75□□□□□ -2.13
UPK1AO00322 AC092125.1-201ENST00000562568 1995 ntBASIC1.75□□□□□ -2.13
UPK1AO00322 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.75□□□□□ -2.13
UPK1AO00322 AL359854.1-201ENST00000614203 1594 ntBASIC1.75□□□□□ -2.13
UPK1AO00322 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
UPK1AO00322 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.74□□□□□ -2.13
UPK1AO00322 AP006437.1-201ENST00000641440 3685 ntBASIC1.74□□□□□ -2.13
UPK1AO00322 RNU6-486P-201ENST00000363116 107 ntBASIC1.74□□□□□ -2.13
UPK1AO00322 MIR17-201ENST00000385012 84 ntBASIC1.74□□□□□ -2.13
UPK1AO00322 UBE2FP3-201ENST00000436366 524 ntBASIC1.74□□□□□ -2.13
UPK1AO00322 AL451074.3-201ENST00000437709 472 ntBASIC1.74□□□□□ -2.13
UPK1AO00322 RPL32P28-201ENST00000443577 397 ntBASIC1.74□□□□□ -2.13
UPK1AO00322 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.74□□□□□ -2.13
UPK1AO00322 RPL7P18-201ENST00000478965 734 ntBASIC1.74□□□□□ -2.13
UPK1AO00322 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.74□□□□□ -2.13
UPK1AO00322 AC092436.1-201ENST00000506450 503 ntBASIC1.74□□□□□ -2.13
UPK1AO00322 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.74□□□□□ -2.13
UPK1AO00322 RNA5SP112-201ENST00000515937 99 ntBASIC1.74□□□□□ -2.13
UPK1AO00322 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.74□□□□□ -2.13
UPK1AO00322 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.74□□□□□ -2.13
UPK1AO00322 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.74□□□□□ -2.13
UPK1AO00322 AC008749.1-201ENST00000597650 306 ntBASIC1.74□□□□□ -2.13
UPK1AO00322 MTCYBP22-201ENST00000603788 447 ntBASIC1.74□□□□□ -2.13
UPK1AO00322 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.74□□□□□ -2.13
UPK1AO00322 AC087241.4-201ENST00000612441 480 ntBASIC1.74□□□□□ -2.13
UPK1AO00322 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.74□□□□□ -2.13
UPK1AO00322 UGP2-231ENST00000627474 264 ntTSL 5 BASIC1.74□□□□□ -2.13
UPK1AO00322 AC099654.8-201ENST00000637757 681 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms