Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 SNORD62.1-201ENST00000362541 86 ntBASIC1.8□□□□□ -2.12
SMKR1H3BMG3 SNORA38.1-201ENST00000364172 131 ntBASIC1.8□□□□□ -2.12
SMKR1H3BMG3 RNU6-395P-201ENST00000365662 106 ntBASIC1.8□□□□□ -2.12
SMKR1H3BMG3 RNU6-190P-201ENST00000384154 102 ntBASIC1.8□□□□□ -2.12
SMKR1H3BMG3 SNORA80E-201ENST00000384744 137 ntBASIC1.8□□□□□ -2.12
SMKR1H3BMG3 RNVU1-14-201ENST00000384770 164 ntBASIC1.8□□□□□ -2.12
SMKR1H3BMG3 SNORD115.1-201ENST00000391109 76 ntBASIC1.8□□□□□ -2.12
SMKR1H3BMG3 AL133475.1-201ENST00000404414 305 ntBASIC1.8□□□□□ -2.12
SMKR1H3BMG3 U3.37-201ENST00000408528 213 ntBASIC1.8□□□□□ -2.12
SMKR1H3BMG3 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC1.8□□□□□ -2.12
SMKR1H3BMG3 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC1.8□□□□□ -2.12
SMKR1H3BMG3 AC092809.3-201ENST00000415453 231 ntBASIC1.8□□□□□ -2.12
SMKR1H3BMG3 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.8□□□□□ -2.12
SMKR1H3BMG3 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
SMKR1H3BMG3 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC1.8□□□□□ -2.12
SMKR1H3BMG3 MYL8P-204ENST00000431574 518 ntBASIC1.8□□□□□ -2.12
SMKR1H3BMG3 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC1.8□□□□□ -2.12
SMKR1H3BMG3 AL008629.1-201ENST00000438615 184 ntBASIC1.8□□□□□ -2.12
SMKR1H3BMG3 AL161788.1-201ENST00000441805 169 ntBASIC1.8□□□□□ -2.12
SMKR1H3BMG3 IPO7P1-201ENST00000442031 636 ntBASIC1.8□□□□□ -2.12
SMKR1H3BMG3 VN1R34P-201ENST00000447387 883 ntBASIC1.8□□□□□ -2.12
SMKR1H3BMG3 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.8□□□□□ -2.12
SMKR1H3BMG3 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.8□□□□□ -2.12
SMKR1H3BMG3 SNORD11.1-201ENST00000459482 85 ntBASIC1.8□□□□□ -2.12
SMKR1H3BMG3 RPL7P43-201ENST00000478876 753 ntBASIC1.8□□□□□ -2.12
SMKR1H3BMG3 AC112204.1-201ENST00000502591 103 ntBASIC1.8□□□□□ -2.12
SMKR1H3BMG3 AC020699.1-201ENST00000505161 445 ntBASIC1.8□□□□□ -2.12
SMKR1H3BMG3 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.8□□□□□ -2.12
SMKR1H3BMG3 Y_RNA.689-201ENST00000516589 107 ntBASIC1.8□□□□□ -2.12
SMKR1H3BMG3 IGLV3-17-201ENST00000519099 244 ntBASIC1.8□□□□□ -2.12
SMKR1H3BMG3 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.8□□□□□ -2.12
SMKR1H3BMG3 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.8□□□□□ -2.12
SMKR1H3BMG3 AC079600.2-201ENST00000550076 130 ntBASIC1.8□□□□□ -2.12
SMKR1H3BMG3 ZNF519P3-201ENST00000557158 1032 ntBASIC1.8□□□□□ -2.12
SMKR1H3BMG3 AC027176.1-201ENST00000560204 514 ntBASIC1.8□□□□□ -2.12
SMKR1H3BMG3 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC1.8□□□□□ -2.12
SMKR1H3BMG3 AC234778.2-201ENST00000566241 354 ntBASIC1.8□□□□□ -2.12
SMKR1H3BMG3 ISCA1P3-201ENST00000577104 373 ntBASIC1.8□□□□□ -2.12
SMKR1H3BMG3 MIR3908-201ENST00000579798 126 ntBASIC1.8□□□□□ -2.12
SMKR1H3BMG3 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.8□□□□□ -2.12
SMKR1H3BMG3 BNIP3P39-201ENST00000601077 554 ntBASIC1.8□□□□□ -2.12
SMKR1H3BMG3 AC011890.2-201ENST00000613393 294 ntBASIC1.8□□□□□ -2.12
SMKR1H3BMG3 AC009090.3-201ENST00000616553 565 ntBASIC1.8□□□□□ -2.12
SMKR1H3BMG3 AC022960.3-201ENST00000619794 441 ntBASIC1.8□□□□□ -2.12
SMKR1H3BMG3 AC093591.3-201ENST00000634516 308 ntBASIC1.8□□□□□ -2.12
SMKR1H3BMG3 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
SMKR1H3BMG3 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.8□□□□□ -2.12
SMKR1H3BMG3 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.8□□□□□ -2.12
SMKR1H3BMG3 ANKRD36BP1-201ENST00000358576 1779 ntBASIC1.8□□□□□ -2.12
SMKR1H3BMG3 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.79□□□□□ -2.12
SMKR1H3BMG3 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
SMKR1H3BMG3 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SMKR1H3BMG3 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC1.79□□□□□ -2.12
SMKR1H3BMG3 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SMKR1H3BMG3 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
SMKR1H3BMG3 MIR95-201ENST00000385072 81 ntBASIC1.79□□□□□ -2.12
SMKR1H3BMG3 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SMKR1H3BMG3 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SMKR1H3BMG3 CIR1P3-201ENST00000405137 479 ntBASIC1.79□□□□□ -2.12
SMKR1H3BMG3 AL138885.1-201ENST00000405921 675 ntBASIC1.79□□□□□ -2.12
SMKR1H3BMG3 FTH1P15-201ENST00000406984 280 ntBASIC1.79□□□□□ -2.12
SMKR1H3BMG3 AC127391.1-201ENST00000411737 98 ntBASIC1.79□□□□□ -2.12
SMKR1H3BMG3 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC1.79□□□□□ -2.12
SMKR1H3BMG3 AC098592.1-201ENST00000419352 333 ntBASIC1.79□□□□□ -2.12
SMKR1H3BMG3 RPS15AP12-201ENST00000419498 388 ntBASIC1.79□□□□□ -2.12
SMKR1H3BMG3 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.79□□□□□ -2.12
SMKR1H3BMG3 AL160275.3-201ENST00000423876 471 ntBASIC1.79□□□□□ -2.12
SMKR1H3BMG3 AL139132.1-201ENST00000431587 344 ntBASIC1.79□□□□□ -2.12
SMKR1H3BMG3 AC087499.2-201ENST00000432861 149 ntBASIC1.79□□□□□ -2.12
SMKR1H3BMG3 AC009238.1-201ENST00000442165 424 ntBASIC1.79□□□□□ -2.12
SMKR1H3BMG3 AC009237.6-201ENST00000446969 424 ntBASIC1.79□□□□□ -2.12
SMKR1H3BMG3 Z73417.1-201ENST00000447373 778 ntBASIC1.79□□□□□ -2.12
SMKR1H3BMG3 FABP5P13-201ENST00000452144 328 ntBASIC1.79□□□□□ -2.12
SMKR1H3BMG3 AC068587.1-201ENST00000483613 781 ntBASIC1.79□□□□□ -2.12
SMKR1H3BMG3 AC140059.1-201ENST00000489238 361 ntBASIC1.79□□□□□ -2.12
SMKR1H3BMG3 AC026427.2-201ENST00000506228 536 ntBASIC1.79□□□□□ -2.12
SMKR1H3BMG3 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.79□□□□□ -2.12
SMKR1H3BMG3 SNORA31.25-201ENST00000517242 134 ntBASIC1.79□□□□□ -2.12
SMKR1H3BMG3 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC1.79□□□□□ -2.12
SMKR1H3BMG3 MTND2P32-201ENST00000521584 1038 ntBASIC1.79□□□□□ -2.12
SMKR1H3BMG3 FAM92A1P1-201ENST00000528023 890 ntBASIC1.79□□□□□ -2.12
SMKR1H3BMG3 AC087241.2-201ENST00000535801 324 ntBASIC1.79□□□□□ -2.12
SMKR1H3BMG3 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
SMKR1H3BMG3 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.79□□□□□ -2.12
SMKR1H3BMG3 AC078814.3-201ENST00000553036 491 ntBASIC1.79□□□□□ -2.12
SMKR1H3BMG3 AC121758.2-201ENST00000553271 193 ntBASIC1.79□□□□□ -2.12
SMKR1H3BMG3 AC091489.2-201ENST00000566263 604 ntBASIC1.79□□□□□ -2.12
SMKR1H3BMG3 MIR3126-201ENST00000577443 74 ntBASIC1.79□□□□□ -2.12
SMKR1H3BMG3 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SMKR1H3BMG3 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.79□□□□□ -2.12
SMKR1H3BMG3 AC087045.1-201ENST00000605856 382 ntBASIC1.79□□□□□ -2.12
SMKR1H3BMG3 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.79□□□□□ -2.12
SMKR1H3BMG3 AP000240.1-201ENST00000609910 452 ntBASIC1.79□□□□□ -2.12
SMKR1H3BMG3 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.79□□□□□ -2.12
SMKR1H3BMG3 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
SMKR1H3BMG3 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
SMKR1H3BMG3 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.79□□□□□ -2.12
SMKR1H3BMG3 FTO-223ENST00000640179 210 ntTSL 5 BASIC1.79□□□□□ -2.12
SMKR1H3BMG3 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.79□□□□□ -2.12
SMKR1H3BMG3 AL445523.1-201ENST00000451184 1362 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms