Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 RPL21P99-201ENST00000480369 423 ntBASIC1.58□□□□□ -2.16
HDGFL3Q9Y3E1 AC107032.1-201ENST00000485945 480 ntBASIC1.58□□□□□ -2.16
HDGFL3Q9Y3E1 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.58□□□□□ -2.16
HDGFL3Q9Y3E1 RPS29P11-201ENST00000496507 171 ntBASIC1.58□□□□□ -2.16
HDGFL3Q9Y3E1 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.58□□□□□ -2.16
HDGFL3Q9Y3E1 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC1.58□□□□□ -2.16
HDGFL3Q9Y3E1 YWHAEP4-201ENST00000505390 198 ntBASIC1.58□□□□□ -2.16
HDGFL3Q9Y3E1 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.58□□□□□ -2.16
HDGFL3Q9Y3E1 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.58□□□□□ -2.16
HDGFL3Q9Y3E1 MTND5P13-201ENST00000513046 1079 ntBASIC1.58□□□□□ -2.16
HDGFL3Q9Y3E1 RNA5SP165-201ENST00000517142 115 ntBASIC1.58□□□□□ -2.16
HDGFL3Q9Y3E1 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.58□□□□□ -2.16
HDGFL3Q9Y3E1 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
HDGFL3Q9Y3E1 DEFB130C-202ENST00000530001 230 ntBASIC1.58□□□□□ -2.16
HDGFL3Q9Y3E1 ROCK1P1-201ENST00000573767 549 ntBASIC1.58□□□□□ -2.16
HDGFL3Q9Y3E1 MIR4287-201ENST00000579398 78 ntBASIC1.58□□□□□ -2.16
HDGFL3Q9Y3E1 AF038458.1-201ENST00000588406 262 ntBASIC1.58□□□□□ -2.16
HDGFL3Q9Y3E1 AL158827.2-201ENST00000602494 330 ntBASIC1.58□□□□□ -2.16
HDGFL3Q9Y3E1 DUSP12P1-201ENST00000612874 516 ntBASIC1.58□□□□□ -2.16
HDGFL3Q9Y3E1 MIR6845-201ENST00000613182 61 ntBASIC1.58□□□□□ -2.16
HDGFL3Q9Y3E1 AC084768.2-201ENST00000622736 221 ntBASIC1.58□□□□□ -2.16
HDGFL3Q9Y3E1 AL691447.3-201ENST00000635020 330 ntBASIC1.58□□□□□ -2.16
HDGFL3Q9Y3E1 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
HDGFL3Q9Y3E1 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
HDGFL3Q9Y3E1 Y_RNA.408-201ENST00000383987 102 ntBASIC1.57□□□□□ -2.16
HDGFL3Q9Y3E1 AL603865.2-201ENST00000401679 213 ntBASIC1.57□□□□□ -2.16
HDGFL3Q9Y3E1 USP9YP26-201ENST00000421008 661 ntBASIC1.57□□□□□ -2.16
HDGFL3Q9Y3E1 MRPS36P1-201ENST00000421291 307 ntBASIC1.57□□□□□ -2.16
HDGFL3Q9Y3E1 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.57□□□□□ -2.16
HDGFL3Q9Y3E1 MTND5P14-201ENST00000441481 1267 ntBASIC1.57□□□□□ -2.16
HDGFL3Q9Y3E1 USP9YP15-201ENST00000442391 422 ntBASIC1.57□□□□□ -2.16
HDGFL3Q9Y3E1 MTCO3P45-201ENST00000443036 613 ntBASIC1.57□□□□□ -2.16
HDGFL3Q9Y3E1 AC010095.1-201ENST00000443543 144 ntBASIC1.57□□□□□ -2.16
HDGFL3Q9Y3E1 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.57□□□□□ -2.16
HDGFL3Q9Y3E1 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.57□□□□□ -2.16
HDGFL3Q9Y3E1 RPL23AP3-201ENST00000453844 468 ntBASIC1.57□□□□□ -2.16
HDGFL3Q9Y3E1 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC1.57□□□□□ -2.16
HDGFL3Q9Y3E1 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
HDGFL3Q9Y3E1 AC008628.1-201ENST00000508663 265 ntBASIC1.57□□□□□ -2.16
HDGFL3Q9Y3E1 AC110760.3-202ENST00000515177 371 ntBASIC1.57□□□□□ -2.16
HDGFL3Q9Y3E1 RNU6-703P-201ENST00000516946 107 ntBASIC1.57□□□□□ -2.16
HDGFL3Q9Y3E1 MRPS36P5-201ENST00000551909 298 ntBASIC1.57□□□□□ -2.16
HDGFL3Q9Y3E1 AC024614.2-201ENST00000577584 372 ntBASIC1.57□□□□□ -2.16
HDGFL3Q9Y3E1 MIR3167-201ENST00000579623 85 ntBASIC1.57□□□□□ -2.16
HDGFL3Q9Y3E1 AC010928.2-201ENST00000588017 287 ntBASIC1.57□□□□□ -2.16
HDGFL3Q9Y3E1 AC004908.2-201ENST00000609090 574 ntBASIC1.57□□□□□ -2.16
HDGFL3Q9Y3E1 AC009237.15-201ENST00000610252 501 ntBASIC1.57□□□□□ -2.16
HDGFL3Q9Y3E1 AC011939.3-201ENST00000613686 466 ntBASIC1.57□□□□□ -2.16
HDGFL3Q9Y3E1 AC109809.1-201ENST00000619665 545 ntBASIC1.57□□□□□ -2.16
HDGFL3Q9Y3E1 ADAM3A-203ENST00000461344 2157 ntBASIC1.57□□□□□ -2.16
HDGFL3Q9Y3E1 RNU6-1159P-201ENST00000362933 107 ntBASIC1.56□□□□□ -2.16
HDGFL3Q9Y3E1 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
HDGFL3Q9Y3E1 RNU6-432P-201ENST00000384196 109 ntBASIC1.56□□□□□ -2.16
HDGFL3Q9Y3E1 U8.14-201ENST00000390843 143 ntBASIC1.56□□□□□ -2.16
HDGFL3Q9Y3E1 RNU2-68P-201ENST00000410878 191 ntBASIC1.56□□□□□ -2.16
HDGFL3Q9Y3E1 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.56□□□□□ -2.16
HDGFL3Q9Y3E1 RPL23AP39-201ENST00000415533 405 ntBASIC1.56□□□□□ -2.16
HDGFL3Q9Y3E1 UBE2FP1-201ENST00000416536 447 ntBASIC1.56□□□□□ -2.16
HDGFL3Q9Y3E1 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.56□□□□□ -2.16
HDGFL3Q9Y3E1 XKRYP1-201ENST00000423438 492 ntBASIC1.56□□□□□ -2.16
HDGFL3Q9Y3E1 AC096920.1-201ENST00000423991 241 ntBASIC1.56□□□□□ -2.16
HDGFL3Q9Y3E1 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC1.56□□□□□ -2.16
HDGFL3Q9Y3E1 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.56□□□□□ -2.16
HDGFL3Q9Y3E1 XKRYP2-201ENST00000432915 492 ntBASIC1.56□□□□□ -2.16
HDGFL3Q9Y3E1 AL645568.3-201ENST00000433683 316 ntBASIC1.56□□□□□ -2.16
HDGFL3Q9Y3E1 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.56□□□□□ -2.16
HDGFL3Q9Y3E1 AC007677.1-201ENST00000445757 515 ntBASIC1.56□□□□□ -2.16
HDGFL3Q9Y3E1 MTND1P31-201ENST00000449206 961 ntBASIC1.56□□□□□ -2.16
HDGFL3Q9Y3E1 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.56□□□□□ -2.16
HDGFL3Q9Y3E1 AP001324.2-201ENST00000461163 319 ntBASIC1.56□□□□□ -2.16
HDGFL3Q9Y3E1 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.56□□□□□ -2.16
HDGFL3Q9Y3E1 RPL23AP63-201ENST00000498752 471 ntBASIC1.56□□□□□ -2.16
HDGFL3Q9Y3E1 HMGB3P17-201ENST00000504195 649 ntBASIC1.56□□□□□ -2.16
HDGFL3Q9Y3E1 RNA5SP137-201ENST00000516833 135 ntBASIC1.56□□□□□ -2.16
HDGFL3Q9Y3E1 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.56□□□□□ -2.16
HDGFL3Q9Y3E1 DUXAP1-201ENST00000556632 463 ntBASIC1.56□□□□□ -2.16
HDGFL3Q9Y3E1 AC104072.1-201ENST00000568817 668 ntBASIC1.56□□□□□ -2.16
HDGFL3Q9Y3E1 MIR4255-201ENST00000579351 72 ntBASIC1.56□□□□□ -2.16
HDGFL3Q9Y3E1 AC011494.1-201ENST00000596454 237 ntBASIC1.56□□□□□ -2.16
HDGFL3Q9Y3E1 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.56□□□□□ -2.16
HDGFL3Q9Y3E1 AL355598.1-201ENST00000604169 202 ntBASIC1.56□□□□□ -2.16
HDGFL3Q9Y3E1 AC005034.5-201ENST00000604219 466 ntBASIC1.56□□□□□ -2.16
HDGFL3Q9Y3E1 OR1S1-201ENST00000624470 978 ntBASIC1.56□□□□□ -2.16
HDGFL3Q9Y3E1 AC099063.3-201ENST00000642066 185 ntBASIC1.56□□□□□ -2.16
HDGFL3Q9Y3E1 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
HDGFL3Q9Y3E1 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
HDGFL3Q9Y3E1 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.55□□□□□ -2.16
HDGFL3Q9Y3E1 AC092447.10-201ENST00000620607 1652 ntBASIC1.55□□□□□ -2.16
HDGFL3Q9Y3E1 AC103710.2-202ENST00000641454 2853 ntBASIC1.55□□□□□ -2.16
HDGFL3Q9Y3E1 RNU1-72P-201ENST00000362976 153 ntBASIC1.55□□□□□ -2.16
HDGFL3Q9Y3E1 RNU6-1167P-201ENST00000363227 94 ntBASIC1.55□□□□□ -2.16
HDGFL3Q9Y3E1 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.55□□□□□ -2.16
HDGFL3Q9Y3E1 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.55□□□□□ -2.16
HDGFL3Q9Y3E1 Z98749.2-208ENST00000381646 500 ntBASIC1.55□□□□□ -2.16
HDGFL3Q9Y3E1 RNU6-19P-201ENST00000384718 107 ntBASIC1.55□□□□□ -2.16
HDGFL3Q9Y3E1 HMGN2P39-201ENST00000398005 273 ntBASIC1.55□□□□□ -2.16
HDGFL3Q9Y3E1 AL356421.1-201ENST00000403255 413 ntBASIC1.55□□□□□ -2.16
HDGFL3Q9Y3E1 AL139397.2-201ENST00000404529 772 ntBASIC1.55□□□□□ -2.16
HDGFL3Q9Y3E1 NDUFS5P1-201ENST00000405668 289 ntBASIC1.55□□□□□ -2.16
HDGFL3Q9Y3E1 RNU2-63P-201ENST00000410792 194 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms