Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PPARGC1AQ9UBK2 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.21□□□□□ -1.74
PPARGC1AQ9UBK2 AL133383.2-201ENST00000622958 2336 ntBASIC4.21□□□□□ -1.74
PPARGC1AQ9UBK2 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
PPARGC1AQ9UBK2 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.21□□□□□ -1.74
PPARGC1AQ9UBK2 RNU6-1167P-201ENST00000363227 94 ntBASIC4.21□□□□□ -1.74
PPARGC1AQ9UBK2 RNU6-1329P-201ENST00000365664 107 ntBASIC4.21□□□□□ -1.74
PPARGC1AQ9UBK2 Y_RNA.463-201ENST00000384271 102 ntBASIC4.21□□□□□ -1.74
PPARGC1AQ9UBK2 RNA5SP317-201ENST00000410176 116 ntBASIC4.21□□□□□ -1.74
PPARGC1AQ9UBK2 RNA5SP311-201ENST00000411290 116 ntBASIC4.21□□□□□ -1.74
PPARGC1AQ9UBK2 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PPARGC1AQ9UBK2 MCFD2P1-201ENST00000417812 300 ntBASIC4.21□□□□□ -1.74
PPARGC1AQ9UBK2 RPL27AP8-201ENST00000424277 446 ntBASIC4.21□□□□□ -1.74
PPARGC1AQ9UBK2 AL358176.2-201ENST00000425769 204 ntBASIC4.21□□□□□ -1.74
PPARGC1AQ9UBK2 AL592045.1-201ENST00000429867 352 ntBASIC4.21□□□□□ -1.74
PPARGC1AQ9UBK2 HMGB1P12-201ENST00000438594 598 ntBASIC4.21□□□□□ -1.74
PPARGC1AQ9UBK2 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.21□□□□□ -1.74
PPARGC1AQ9UBK2 RPL23AP31-201ENST00000456160 467 ntBASIC4.21□□□□□ -1.74
PPARGC1AQ9UBK2 AL135752.1-201ENST00000479477 471 ntBASIC4.21□□□□□ -1.74
PPARGC1AQ9UBK2 AL049874.1-201ENST00000489560 388 ntBASIC4.21□□□□□ -1.74
PPARGC1AQ9UBK2 SUMO2P6-201ENST00000505273 288 ntBASIC4.21□□□□□ -1.74
PPARGC1AQ9UBK2 MTND3P25-201ENST00000509243 135 ntBASIC4.21□□□□□ -1.74
PPARGC1AQ9UBK2 NDUFB4P9-201ENST00000511646 388 ntBASIC4.21□□□□□ -1.74
PPARGC1AQ9UBK2 AC092436.3-201ENST00000511788 257 ntBASIC4.21□□□□□ -1.74
PPARGC1AQ9UBK2 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.21□□□□□ -1.74
PPARGC1AQ9UBK2 PTP4A1P4-201ENST00000512479 322 ntBASIC4.21□□□□□ -1.74
PPARGC1AQ9UBK2 SNORA25.10-201ENST00000515926 124 ntBASIC4.21□□□□□ -1.74
PPARGC1AQ9UBK2 RNA5SP315-201ENST00000516340 116 ntBASIC4.21□□□□□ -1.74
PPARGC1AQ9UBK2 RNA5SP312-201ENST00000517068 116 ntBASIC4.21□□□□□ -1.74
PPARGC1AQ9UBK2 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.21□□□□□ -1.74
PPARGC1AQ9UBK2 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.21□□□□□ -1.74
PPARGC1AQ9UBK2 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.21□□□□□ -1.74
PPARGC1AQ9UBK2 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.21□□□□□ -1.74
PPARGC1AQ9UBK2 AL157871.3-201ENST00000557231 293 ntBASIC4.21□□□□□ -1.74
PPARGC1AQ9UBK2 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.21□□□□□ -1.74
PPARGC1AQ9UBK2 AL512643.1-201ENST00000635735 524 ntBASIC4.21□□□□□ -1.74
PPARGC1AQ9UBK2 Z99571.1-201ENST00000636677 394 ntBASIC4.21□□□□□ -1.74
PPARGC1AQ9UBK2 OR4G2P-202ENST00000641004 1759 ntBASIC4.21□□□□□ -1.74
PPARGC1AQ9UBK2 AC116096.1-201ENST00000566804 2314 ntBASIC4.21□□□□□ -1.74
PPARGC1AQ9UBK2 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.21□□□□□ -1.74
PPARGC1AQ9UBK2 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
PPARGC1AQ9UBK2 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.2□□□□□ -1.74
PPARGC1AQ9UBK2 AF127577.6-201ENST00000623352 2191 ntBASIC4.2□□□□□ -1.74
PPARGC1AQ9UBK2 Z82217.1-201ENST00000625157 8149 ntBASIC4.2□□□□□ -1.74
PPARGC1AQ9UBK2 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
PPARGC1AQ9UBK2 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.2□□□□□ -1.74
PPARGC1AQ9UBK2 AC066616.2-201ENST00000559334 1481 ntBASIC4.2□□□□□ -1.74
PPARGC1AQ9UBK2 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.2□□□□□ -1.74
PPARGC1AQ9UBK2 Y_RNA.133-201ENST00000363428 110 ntBASIC4.2□□□□□ -1.74
PPARGC1AQ9UBK2 RNA5SP130-201ENST00000364431 114 ntBASIC4.2□□□□□ -1.74
PPARGC1AQ9UBK2 RNU6-1303P-201ENST00000364841 107 ntBASIC4.2□□□□□ -1.74
PPARGC1AQ9UBK2 RNU6-463P-201ENST00000384340 107 ntBASIC4.2□□□□□ -1.74
PPARGC1AQ9UBK2 SNORA3C-201ENST00000408792 125 ntBASIC4.2□□□□□ -1.74
PPARGC1AQ9UBK2 RNU2-3P-201ENST00000410144 191 ntBASIC4.2□□□□□ -1.74
PPARGC1AQ9UBK2 HSPE1P12-201ENST00000412576 301 ntBASIC4.2□□□□□ -1.74
PPARGC1AQ9UBK2 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.2□□□□□ -1.74
PPARGC1AQ9UBK2 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.2□□□□□ -1.74
PPARGC1AQ9UBK2 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC4.2□□□□□ -1.74
PPARGC1AQ9UBK2 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.2□□□□□ -1.74
PPARGC1AQ9UBK2 UBE2D3P2-201ENST00000424409 445 ntBASIC4.2□□□□□ -1.74
PPARGC1AQ9UBK2 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.2□□□□□ -1.74
PPARGC1AQ9UBK2 SNRPEP4-201ENST00000435815 279 ntBASIC4.2□□□□□ -1.74
PPARGC1AQ9UBK2 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.2□□□□□ -1.74
PPARGC1AQ9UBK2 RPS24P13-201ENST00000442520 397 ntBASIC4.2□□□□□ -1.74
PPARGC1AQ9UBK2 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC4.2□□□□□ -1.74
PPARGC1AQ9UBK2 HMGN2P7-201ENST00000456186 273 ntBASIC4.2□□□□□ -1.74
PPARGC1AQ9UBK2 AC103987.1-201ENST00000473394 348 ntBASIC4.2□□□□□ -1.74
PPARGC1AQ9UBK2 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.2□□□□□ -1.74
PPARGC1AQ9UBK2 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.2□□□□□ -1.74
PPARGC1AQ9UBK2 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.2□□□□□ -1.74
PPARGC1AQ9UBK2 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.2□□□□□ -1.74
PPARGC1AQ9UBK2 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.2□□□□□ -1.74
PPARGC1AQ9UBK2 AC091516.1-201ENST00000549191 703 ntBASIC4.2□□□□□ -1.74
PPARGC1AQ9UBK2 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.2□□□□□ -1.74
PPARGC1AQ9UBK2 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.2□□□□□ -1.74
PPARGC1AQ9UBK2 AL161798.1-201ENST00000604630 131 ntBASIC4.2□□□□□ -1.74
PPARGC1AQ9UBK2 AC106900.2-201ENST00000604994 317 ntBASIC4.2□□□□□ -1.74
PPARGC1AQ9UBK2 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.2□□□□□ -1.74
PPARGC1AQ9UBK2 MIR6867-201ENST00000610636 67 ntBASIC4.2□□□□□ -1.74
PPARGC1AQ9UBK2 AC012531.5-201ENST00000611375 151 ntBASIC4.2□□□□□ -1.74
PPARGC1AQ9UBK2 AC112484.5-201ENST00000624189 228 ntBASIC4.2□□□□□ -1.74
PPARGC1AQ9UBK2 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
PPARGC1AQ9UBK2 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.2□□□□□ -1.74
PPARGC1AQ9UBK2 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
PPARGC1AQ9UBK2 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
PPARGC1AQ9UBK2 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.2□□□□□ -1.74
PPARGC1AQ9UBK2 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PPARGC1AQ9UBK2 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PPARGC1AQ9UBK2 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PPARGC1AQ9UBK2 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
PPARGC1AQ9UBK2 MTND5P30-201ENST00000452896 1731 ntBASIC4.19□□□□□ -1.74
PPARGC1AQ9UBK2 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PPARGC1AQ9UBK2 ZBTB8OSP1-201ENST00000342688 498 ntBASIC4.19□□□□□ -1.74
PPARGC1AQ9UBK2 Y_RNA.80-201ENST00000362996 102 ntBASIC4.19□□□□□ -1.74
PPARGC1AQ9UBK2 Y_RNA.404-201ENST00000383978 102 ntBASIC4.19□□□□□ -1.74
PPARGC1AQ9UBK2 RNU1-13P-201ENST00000384499 162 ntBASIC4.19□□□□□ -1.74
PPARGC1AQ9UBK2 SNORA41-201ENST00000384675 132 ntBASIC4.19□□□□□ -1.74
PPARGC1AQ9UBK2 MRPL42P3-201ENST00000401492 326 ntBASIC4.19□□□□□ -1.74
PPARGC1AQ9UBK2 MIR1183-201ENST00000408856 89 ntBASIC4.19□□□□□ -1.74
PPARGC1AQ9UBK2 CYCSP33-201ENST00000414485 327 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms