Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 RNU6-280P-201ENST00000364145 104 ntBASIC4.42□□□□□ -1.7
SSU72Q9NP77 MIR190B-201ENST00000401119 79 ntBASIC4.42□□□□□ -1.7
SSU72Q9NP77 RNU2-71P-201ENST00000411395 189 ntBASIC4.42□□□□□ -1.7
SSU72Q9NP77 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.42□□□□□ -1.7
SSU72Q9NP77 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.42□□□□□ -1.7
SSU72Q9NP77 AL049745.1-201ENST00000433953 286 ntBASIC4.42□□□□□ -1.7
SSU72Q9NP77 AC016831.4-201ENST00000438302 307 ntBASIC4.42□□□□□ -1.7
SSU72Q9NP77 IFNWP4-201ENST00000453148 294 ntBASIC4.42□□□□□ -1.7
SSU72Q9NP77 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.42□□□□□ -1.7
SSU72Q9NP77 U8.22-201ENST00000459141 133 ntBASIC4.42□□□□□ -1.7
SSU72Q9NP77 U8.21-201ENST00000459536 136 ntBASIC4.42□□□□□ -1.7
SSU72Q9NP77 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.42□□□□□ -1.7
SSU72Q9NP77 AC087190.1-201ENST00000484462 480 ntBASIC4.42□□□□□ -1.7
SSU72Q9NP77 AC107032.1-201ENST00000485945 480 ntBASIC4.42□□□□□ -1.7
SSU72Q9NP77 AC108145.1-201ENST00000503770 153 ntBASIC4.42□□□□□ -1.7
SSU72Q9NP77 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.42□□□□□ -1.7
SSU72Q9NP77 RNA5SP497-201ENST00000516081 97 ntBASIC4.42□□□□□ -1.7
SSU72Q9NP77 RNU6-612P-201ENST00000516909 102 ntBASIC4.42□□□□□ -1.7
SSU72Q9NP77 HIGD1AP5-201ENST00000529959 259 ntBASIC4.42□□□□□ -1.7
SSU72Q9NP77 AC008033.2-201ENST00000542626 177 ntBASIC4.42□□□□□ -1.7
SSU72Q9NP77 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.42□□□□□ -1.7
SSU72Q9NP77 AL442163.3-201ENST00000554110 156 ntBASIC4.42□□□□□ -1.7
SSU72Q9NP77 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.42□□□□□ -1.7
SSU72Q9NP77 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.42□□□□□ -1.7
SSU72Q9NP77 FAM60BP-201ENST00000578364 658 ntBASIC4.42□□□□□ -1.7
SSU72Q9NP77 MIR4300-201ENST00000581016 96 ntBASIC4.42□□□□□ -1.7
SSU72Q9NP77 AC002545.1-201ENST00000592511 181 ntBASIC4.42□□□□□ -1.7
SSU72Q9NP77 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSU72Q9NP77 SRGNP1-201ENST00000603392 451 ntBASIC4.42□□□□□ -1.7
SSU72Q9NP77 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.42□□□□□ -1.7
SSU72Q9NP77 AC004852.3-201ENST00000614131 326 ntBASIC4.42□□□□□ -1.7
SSU72Q9NP77 AL161629.2-201ENST00000615347 275 ntBASIC4.42□□□□□ -1.7
SSU72Q9NP77 AC006065.5-201ENST00000623427 349 ntBASIC4.42□□□□□ -1.7
SSU72Q9NP77 AC091903.1-201ENST00000624322 454 ntBASIC4.42□□□□□ -1.7
SSU72Q9NP77 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SSU72Q9NP77 HSPA8P1-201ENST00000425843 1833 ntBASIC4.42□□□□□ -1.7
SSU72Q9NP77 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSU72Q9NP77 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.41□□□□□ -1.7
SSU72Q9NP77 DDX18P3-201ENST00000404856 2007 ntBASIC4.41□□□□□ -1.7
SSU72Q9NP77 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.41□□□□□ -1.7
SSU72Q9NP77 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.41□□□□□ -1.7
SSU72Q9NP77 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
SSU72Q9NP77 AC021146.4-201ENST00000309229 279 ntBASIC4.41□□□□□ -1.7
SSU72Q9NP77 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SSU72Q9NP77 Y_RNA.65-201ENST00000362846 100 ntBASIC4.41□□□□□ -1.7
SSU72Q9NP77 RNU6-428P-201ENST00000362942 107 ntBASIC4.41□□□□□ -1.7
SSU72Q9NP77 SNORA71.2-201ENST00000364941 134 ntBASIC4.41□□□□□ -1.7
SSU72Q9NP77 Y_RNA.297-201ENST00000364950 91 ntBASIC4.41□□□□□ -1.7
SSU72Q9NP77 Y_RNA.352-201ENST00000365439 102 ntBASIC4.41□□□□□ -1.7
SSU72Q9NP77 Y_RNA.358-201ENST00000365491 99 ntBASIC4.41□□□□□ -1.7
SSU72Q9NP77 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SSU72Q9NP77 RNU6-886P-201ENST00000384319 105 ntBASIC4.41□□□□□ -1.7
SSU72Q9NP77 RPL21P75-201ENST00000396599 483 ntBASIC4.41□□□□□ -1.7
SSU72Q9NP77 RPL21P28-201ENST00000401418 483 ntBASIC4.41□□□□□ -1.7
SSU72Q9NP77 MRPL35P1-201ENST00000404272 572 ntBASIC4.41□□□□□ -1.7
SSU72Q9NP77 Y_RNA.623-201ENST00000411128 95 ntBASIC4.41□□□□□ -1.7
SSU72Q9NP77 BX510359.2-201ENST00000417920 305 ntBASIC4.41□□□□□ -1.7
SSU72Q9NP77 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.41□□□□□ -1.7
SSU72Q9NP77 AL590556.1-201ENST00000423231 483 ntBASIC4.41□□□□□ -1.7
SSU72Q9NP77 AC096920.1-201ENST00000423991 241 ntBASIC4.41□□□□□ -1.7
SSU72Q9NP77 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.41□□□□□ -1.7
SSU72Q9NP77 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.41□□□□□ -1.7
SSU72Q9NP77 RPL21P11-201ENST00000461458 483 ntBASIC4.41□□□□□ -1.7
SSU72Q9NP77 RPL21P39-201ENST00000463605 483 ntBASIC4.41□□□□□ -1.7
SSU72Q9NP77 AC132942.1-201ENST00000486753 483 ntBASIC4.41□□□□□ -1.7
SSU72Q9NP77 RPL21P13-201ENST00000488305 481 ntBASIC4.41□□□□□ -1.7
SSU72Q9NP77 AC093591.1-201ENST00000491435 481 ntBASIC4.41□□□□□ -1.7
SSU72Q9NP77 RPL21P16-201ENST00000495531 483 ntBASIC4.41□□□□□ -1.7
SSU72Q9NP77 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.41□□□□□ -1.7
SSU72Q9NP77 Y_RNA.713-201ENST00000517013 96 ntBASIC4.41□□□□□ -1.7
SSU72Q9NP77 AC025755.1-201ENST00000521306 278 ntBASIC4.41□□□□□ -1.7
SSU72Q9NP77 AL590705.4-201ENST00000532209 134 ntBASIC4.41□□□□□ -1.7
SSU72Q9NP77 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.41□□□□□ -1.7
SSU72Q9NP77 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.41□□□□□ -1.7
SSU72Q9NP77 MIR4643-201ENST00000577473 78 ntBASIC4.41□□□□□ -1.7
SSU72Q9NP77 AC023575.1-201ENST00000580510 358 ntBASIC4.41□□□□□ -1.7
SSU72Q9NP77 AC005046.1-201ENST00000608515 625 ntBASIC4.41□□□□□ -1.7
SSU72Q9NP77 AC131238.1-201ENST00000617135 328 ntBASIC4.41□□□□□ -1.7
SSU72Q9NP77 MIR6891-201ENST00000618788 93 ntBASIC4.41□□□□□ -1.7
SSU72Q9NP77 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.41□□□□□ -1.7
SSU72Q9NP77 MIR6715B-201ENST00000637172 77 ntBASIC4.41□□□□□ -1.7
SSU72Q9NP77 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SSU72Q9NP77 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.4□□□□□ -1.7
SSU72Q9NP77 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SSU72Q9NP77 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.4□□□□□ -1.7
SSU72Q9NP77 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
SSU72Q9NP77 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.4□□□□□ -1.7
SSU72Q9NP77 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.4□□□□□ -1.7
SSU72Q9NP77 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.4□□□□□ -1.7
SSU72Q9NP77 RNU6-774P-201ENST00000363238 107 ntBASIC4.4□□□□□ -1.71
SSU72Q9NP77 Y_RNA.269-201ENST00000364685 89 ntBASIC4.4□□□□□ -1.71
SSU72Q9NP77 Y_RNA.277-201ENST00000364754 102 ntBASIC4.4□□□□□ -1.71
SSU72Q9NP77 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SSU72Q9NP77 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SSU72Q9NP77 Y_RNA.405-201ENST00000383979 100 ntBASIC4.4□□□□□ -1.71
SSU72Q9NP77 Y_RNA.451-201ENST00000384200 100 ntBASIC4.4□□□□□ -1.71
SSU72Q9NP77 Y_RNA.524-201ENST00000384564 100 ntBASIC4.4□□□□□ -1.71
SSU72Q9NP77 Y_RNA.561-201ENST00000384694 100 ntBASIC4.4□□□□□ -1.71
SSU72Q9NP77 SNORA19-201ENST00000384737 128 ntBASIC4.4□□□□□ -1.71
SSU72Q9NP77 SNORA12.2-201ENST00000391040 156 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms