Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 PRELID2P1-201ENST00000552837 301 ntBASIC2.37□□□□□ -2.03
TM9SF3Q9HD45 AL133241.1-201ENST00000556832 487 ntBASIC2.37□□□□□ -2.03
TM9SF3Q9HD45 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.37□□□□□ -2.03
TM9SF3Q9HD45 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.37□□□□□ -2.03
TM9SF3Q9HD45 AL138976.2-201ENST00000563989 694 ntBASIC2.37□□□□□ -2.03
TM9SF3Q9HD45 AC061975.8-201ENST00000587058 721 ntBASIC2.37□□□□□ -2.03
TM9SF3Q9HD45 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.37□□□□□ -2.03
TM9SF3Q9HD45 AC025165.5-201ENST00000602802 578 ntBASIC2.37□□□□□ -2.03
TM9SF3Q9HD45 AC107214.2-201ENST00000608204 634 ntBASIC2.37□□□□□ -2.03
TM9SF3Q9HD45 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.37□□□□□ -2.03
TM9SF3Q9HD45 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.37□□□□□ -2.03
TM9SF3Q9HD45 AC016717.2-201ENST00000609089 5141 ntBASIC2.37□□□□□ -2.03
TM9SF3Q9HD45 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
TM9SF3Q9HD45 AC007336.1-201ENST00000576365 3828 ntBASIC2.37□□□□□ -2.03
TM9SF3Q9HD45 AC069528.2-201ENST00000624849 1991 ntBASIC2.36□□□□□ -2.03
TM9SF3Q9HD45 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
TM9SF3Q9HD45 RNU6-486P-201ENST00000363116 107 ntBASIC2.36□□□□□ -2.03
TM9SF3Q9HD45 RNU6-1167P-201ENST00000363227 94 ntBASIC2.36□□□□□ -2.03
TM9SF3Q9HD45 RNU1-91P-201ENST00000364746 163 ntBASIC2.36□□□□□ -2.03
TM9SF3Q9HD45 RNA5SP125-201ENST00000364843 120 ntBASIC2.36□□□□□ -2.03
TM9SF3Q9HD45 SNORA72.3-201ENST00000365074 132 ntBASIC2.36□□□□□ -2.03
TM9SF3Q9HD45 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
TM9SF3Q9HD45 MIR147B-201ENST00000390185 80 ntBASIC2.36□□□□□ -2.03
TM9SF3Q9HD45 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
TM9SF3Q9HD45 AC119751.3-201ENST00000399720 670 ntBASIC2.36□□□□□ -2.03
TM9SF3Q9HD45 AL355497.1-201ENST00000406262 551 ntBASIC2.36□□□□□ -2.03
TM9SF3Q9HD45 BTF3P7-201ENST00000407097 488 ntBASIC2.36□□□□□ -2.03
TM9SF3Q9HD45 MIR320C1-201ENST00000408566 88 ntBASIC2.36□□□□□ -2.03
TM9SF3Q9HD45 USP9YP26-201ENST00000421008 661 ntBASIC2.36□□□□□ -2.03
TM9SF3Q9HD45 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC2.36□□□□□ -2.03
TM9SF3Q9HD45 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.36□□□□□ -2.03
TM9SF3Q9HD45 RPS3AP44-201ENST00000425466 790 ntBASIC2.36□□□□□ -2.03
TM9SF3Q9HD45 SKA2P1-201ENST00000425592 390 ntBASIC2.36□□□□□ -2.03
TM9SF3Q9HD45 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.36□□□□□ -2.03
TM9SF3Q9HD45 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.36□□□□□ -2.03
TM9SF3Q9HD45 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
TM9SF3Q9HD45 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.36□□□□□ -2.03
TM9SF3Q9HD45 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.36□□□□□ -2.03
TM9SF3Q9HD45 AL441985.1-201ENST00000457727 251 ntBASIC2.36□□□□□ -2.03
TM9SF3Q9HD45 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.36□□□□□ -2.03
TM9SF3Q9HD45 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.36□□□□□ -2.03
TM9SF3Q9HD45 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
TM9SF3Q9HD45 RNA5SP112-201ENST00000515937 99 ntBASIC2.36□□□□□ -2.03
TM9SF3Q9HD45 CYCSP26-201ENST00000534107 320 ntBASIC2.36□□□□□ -2.03
TM9SF3Q9HD45 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.36□□□□□ -2.03
TM9SF3Q9HD45 AC021739.1-201ENST00000559631 174 ntBASIC2.36□□□□□ -2.03
TM9SF3Q9HD45 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.36□□□□□ -2.03
TM9SF3Q9HD45 AC105245.1-201ENST00000581934 244 ntBASIC2.36□□□□□ -2.03
TM9SF3Q9HD45 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.36□□□□□ -2.03
TM9SF3Q9HD45 DUSP12P1-201ENST00000612874 516 ntBASIC2.36□□□□□ -2.03
TM9SF3Q9HD45 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.36□□□□□ -2.03
TM9SF3Q9HD45 AC011939.3-201ENST00000613686 466 ntBASIC2.36□□□□□ -2.03
TM9SF3Q9HD45 PISRT1-201ENST00000626175 531 ntBASIC2.36□□□□□ -2.03
TM9SF3Q9HD45 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.36□□□□□ -2.03
TM9SF3Q9HD45 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.36□□□□□ -2.03
TM9SF3Q9HD45 AC006927.4-201ENST00000639187 543 ntBASIC2.36□□□□□ -2.03
TM9SF3Q9HD45 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.36□□□□□ -2.03
TM9SF3Q9HD45 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
TM9SF3Q9HD45 AL359854.1-201ENST00000614203 1594 ntBASIC2.36□□□□□ -2.03
TM9SF3Q9HD45 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.35□□□□□ -2.03
TM9SF3Q9HD45 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
TM9SF3Q9HD45 RNA5SP270-201ENST00000411361 118 ntBASIC2.35□□□□□ -2.03
TM9SF3Q9HD45 RPL21P24-201ENST00000413752 448 ntBASIC2.35□□□□□ -2.03
TM9SF3Q9HD45 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.35□□□□□ -2.03
TM9SF3Q9HD45 AL109913.1-201ENST00000421173 514 ntBASIC2.35□□□□□ -2.03
TM9SF3Q9HD45 MTCO2P17-201ENST00000424336 677 ntBASIC2.35□□□□□ -2.03
TM9SF3Q9HD45 RPL30P4-201ENST00000429309 333 ntBASIC2.35□□□□□ -2.03
TM9SF3Q9HD45 GPM6BP2-201ENST00000432046 144 ntBASIC2.35□□□□□ -2.03
TM9SF3Q9HD45 RSU1P2-202ENST00000437884 485 ntBASIC2.35□□□□□ -2.03
TM9SF3Q9HD45 GPM6BP1-201ENST00000446387 144 ntBASIC2.35□□□□□ -2.03
TM9SF3Q9HD45 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.35□□□□□ -2.03
TM9SF3Q9HD45 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.35□□□□□ -2.03
TM9SF3Q9HD45 RPL22P13-201ENST00000493291 347 ntBASIC2.35□□□□□ -2.03
TM9SF3Q9HD45 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.35□□□□□ -2.03
TM9SF3Q9HD45 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.35□□□□□ -2.03
TM9SF3Q9HD45 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.35□□□□□ -2.03
TM9SF3Q9HD45 AC093809.1-201ENST00000509155 340 ntBASIC2.35□□□□□ -2.03
TM9SF3Q9HD45 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.35□□□□□ -2.03
TM9SF3Q9HD45 MRPS36P3-201ENST00000519284 130 ntBASIC2.35□□□□□ -2.03
TM9SF3Q9HD45 AC087241.2-201ENST00000535801 324 ntBASIC2.35□□□□□ -2.03
TM9SF3Q9HD45 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.35□□□□□ -2.03
TM9SF3Q9HD45 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.35□□□□□ -2.03
TM9SF3Q9HD45 ISCA1P3-201ENST00000577104 373 ntBASIC2.35□□□□□ -2.03
TM9SF3Q9HD45 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.35□□□□□ -2.03
TM9SF3Q9HD45 AC060771.1-201ENST00000582031 164 ntBASIC2.35□□□□□ -2.03
TM9SF3Q9HD45 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.35□□□□□ -2.03
TM9SF3Q9HD45 AL031281.1-201ENST00000604049 488 ntBASIC2.35□□□□□ -2.03
TM9SF3Q9HD45 AL592221.1-201ENST00000605266 382 ntBASIC2.35□□□□□ -2.03
TM9SF3Q9HD45 AC097468.3-201ENST00000607956 456 ntBASIC2.35□□□□□ -2.03
TM9SF3Q9HD45 MIR6840-201ENST00000611937 71 ntBASIC2.35□□□□□ -2.03
TM9SF3Q9HD45 AC112204.3-201ENST00000623822 332 ntBASIC2.35□□□□□ -2.03
TM9SF3Q9HD45 AC103706.2-201ENST00000638080 240 ntBASIC2.35□□□□□ -2.03
TM9SF3Q9HD45 MTND4P16-201ENST00000466108 1367 ntBASIC2.35□□□□□ -2.03
TM9SF3Q9HD45 RNU6-723P-201ENST00000383973 107 ntBASIC2.34□□□□□ -2.03
TM9SF3Q9HD45 AC107081.1-201ENST00000414975 361 ntBASIC2.34□□□□□ -2.03
TM9SF3Q9HD45 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.34□□□□□ -2.03
TM9SF3Q9HD45 MTCO2P21-201ENST00000419780 677 ntBASIC2.34□□□□□ -2.03
TM9SF3Q9HD45 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.34□□□□□ -2.03
TM9SF3Q9HD45 AC003685.2-201ENST00000422795 395 ntBASIC2.34□□□□□ -2.03
TM9SF3Q9HD45 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms