Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 AC007671.2-201ENST00000637344 619 ntBASIC2.66□□□□□ -1.98
RPAP3Q9H6T3 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.66□□□□□ -1.98
RPAP3Q9H6T3 AC104454.1-201ENST00000421341 1401 ntBASIC2.66□□□□□ -1.98
RPAP3Q9H6T3 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
RPAP3Q9H6T3 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.65□□□□□ -1.98
RPAP3Q9H6T3 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.65□□□□□ -1.99
RPAP3Q9H6T3 RNU6-884P-201ENST00000363889 107 ntBASIC2.65□□□□□ -1.99
RPAP3Q9H6T3 SNORA6-201ENST00000384033 151 ntBASIC2.65□□□□□ -1.99
RPAP3Q9H6T3 AF274854.1-201ENST00000413236 615 ntBASIC2.65□□□□□ -1.99
RPAP3Q9H6T3 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.65□□□□□ -1.99
RPAP3Q9H6T3 AC098592.1-201ENST00000419352 333 ntBASIC2.65□□□□□ -1.99
RPAP3Q9H6T3 XKRYP1-201ENST00000423438 492 ntBASIC2.65□□□□□ -1.99
RPAP3Q9H6T3 TOMM20P4-201ENST00000427861 435 ntBASIC2.65□□□□□ -1.99
RPAP3Q9H6T3 XKRYP2-201ENST00000432915 492 ntBASIC2.65□□□□□ -1.99
RPAP3Q9H6T3 AC005094.1-201ENST00000440420 368 ntBASIC2.65□□□□□ -1.99
RPAP3Q9H6T3 AC020550.1-201ENST00000447385 163 ntBASIC2.65□□□□□ -1.99
RPAP3Q9H6T3 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.65□□□□□ -1.99
RPAP3Q9H6T3 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.65□□□□□ -1.99
RPAP3Q9H6T3 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.65□□□□□ -1.99
RPAP3Q9H6T3 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.65□□□□□ -1.99
RPAP3Q9H6T3 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
RPAP3Q9H6T3 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.65□□□□□ -1.99
RPAP3Q9H6T3 AC112673.1-201ENST00000513168 575 ntBASIC2.65□□□□□ -1.99
RPAP3Q9H6T3 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.65□□□□□ -1.99
RPAP3Q9H6T3 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.65□□□□□ -1.99
RPAP3Q9H6T3 MTND1P24-201ENST00000552175 861 ntBASIC2.65□□□□□ -1.99
RPAP3Q9H6T3 SNRPGP18-201ENST00000553000 214 ntBASIC2.65□□□□□ -1.99
RPAP3Q9H6T3 AL391261.3-201ENST00000557194 520 ntBASIC2.65□□□□□ -1.99
RPAP3Q9H6T3 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.65□□□□□ -1.99
RPAP3Q9H6T3 MIR5694-201ENST00000581190 76 ntBASIC2.65□□□□□ -1.99
RPAP3Q9H6T3 MIR4524B-201ENST00000581569 115 ntBASIC2.65□□□□□ -1.99
RPAP3Q9H6T3 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.65□□□□□ -1.99
RPAP3Q9H6T3 AL356575.1-201ENST00000603008 283 ntBASIC2.65□□□□□ -1.99
RPAP3Q9H6T3 FTX_3.1-201ENST00000610451 147 ntBASIC2.65□□□□□ -1.99
RPAP3Q9H6T3 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.65□□□□□ -1.99
RPAP3Q9H6T3 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.65□□□□□ -1.99
RPAP3Q9H6T3 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
RPAP3Q9H6T3 AC007336.1-201ENST00000576365 3828 ntBASIC2.64□□□□□ -1.99
RPAP3Q9H6T3 MIR21-201ENST00000362134 72 ntBASIC2.64□□□□□ -1.99
RPAP3Q9H6T3 RN7SKP226-201ENST00000364912 300 ntBASIC2.64□□□□□ -1.99
RPAP3Q9H6T3 RNU4-72P-201ENST00000410754 173 ntBASIC2.64□□□□□ -1.99
RPAP3Q9H6T3 HIGD1AP15-201ENST00000416198 280 ntBASIC2.64□□□□□ -1.99
RPAP3Q9H6T3 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.64□□□□□ -1.99
RPAP3Q9H6T3 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.64□□□□□ -1.99
RPAP3Q9H6T3 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.64□□□□□ -1.99
RPAP3Q9H6T3 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.64□□□□□ -1.99
RPAP3Q9H6T3 AL160314.1-201ENST00000490836 438 ntBASIC2.64□□□□□ -1.99
RPAP3Q9H6T3 TBCAP3-201ENST00000512475 312 ntBASIC2.64□□□□□ -1.99
RPAP3Q9H6T3 MTND5P13-201ENST00000513046 1079 ntBASIC2.64□□□□□ -1.99
RPAP3Q9H6T3 RANP3-201ENST00000530970 276 ntBASIC2.64□□□□□ -1.99
RPAP3Q9H6T3 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
RPAP3Q9H6T3 AC093012.1-202ENST00000549403 582 ntBASIC2.64□□□□□ -1.99
RPAP3Q9H6T3 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.64□□□□□ -1.99
RPAP3Q9H6T3 ISCA1P3-201ENST00000577104 373 ntBASIC2.64□□□□□ -1.99
RPAP3Q9H6T3 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
RPAP3Q9H6T3 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.64□□□□□ -1.99
RPAP3Q9H6T3 AC022022.2-201ENST00000602989 360 ntBASIC2.64□□□□□ -1.99
RPAP3Q9H6T3 AC112187.2-201ENST00000604345 283 ntBASIC2.64□□□□□ -1.99
RPAP3Q9H6T3 SNORD114-1-201ENST00000362705 72 ntBASIC2.63□□□□□ -1.99
RPAP3Q9H6T3 MIR221-201ENST00000385135 110 ntBASIC2.63□□□□□ -1.99
RPAP3Q9H6T3 U8.14-201ENST00000390843 143 ntBASIC2.63□□□□□ -1.99
RPAP3Q9H6T3 AL139397.2-201ENST00000404529 772 ntBASIC2.63□□□□□ -1.99
RPAP3Q9H6T3 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.63□□□□□ -1.99
RPAP3Q9H6T3 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.63□□□□□ -1.99
RPAP3Q9H6T3 AC244035.1-201ENST00000430042 390 ntBASIC2.63□□□□□ -1.99
RPAP3Q9H6T3 GTF2IP20-201ENST00000431663 360 ntBASIC2.63□□□□□ -1.99
RPAP3Q9H6T3 HMGN2P3-201ENST00000433603 273 ntBASIC2.63□□□□□ -1.99
RPAP3Q9H6T3 HMGN2P5-201ENST00000436882 273 ntBASIC2.63□□□□□ -1.99
RPAP3Q9H6T3 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2.63□□□□□ -1.99
RPAP3Q9H6T3 GDI2P2-201ENST00000445131 608 ntBASIC2.63□□□□□ -1.99
RPAP3Q9H6T3 CECR9-201ENST00000453421 199 ntBASIC2.63□□□□□ -1.99
RPAP3Q9H6T3 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.63□□□□□ -1.99
RPAP3Q9H6T3 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.63□□□□□ -1.99
RPAP3Q9H6T3 RNU6-237P-201ENST00000515985 71 ntBASIC2.63□□□□□ -1.99
RPAP3Q9H6T3 RNU6-927P-201ENST00000516199 100 ntBASIC2.63□□□□□ -1.99
RPAP3Q9H6T3 RNA5SP290-201ENST00000517133 127 ntBASIC2.63□□□□□ -1.99
RPAP3Q9H6T3 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.63□□□□□ -1.99
RPAP3Q9H6T3 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.63□□□□□ -1.99
RPAP3Q9H6T3 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
RPAP3Q9H6T3 DEFB108A-201ENST00000530110 222 ntBASIC2.63□□□□□ -1.99
RPAP3Q9H6T3 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.63□□□□□ -1.99
RPAP3Q9H6T3 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.63□□□□□ -1.99
RPAP3Q9H6T3 AC012435.1-202ENST00000568772 240 ntBASIC2.63□□□□□ -1.99
RPAP3Q9H6T3 AC105137.2-201ENST00000569073 466 ntBASIC2.63□□□□□ -1.99
RPAP3Q9H6T3 AP001004.1-201ENST00000582468 324 ntBASIC2.63□□□□□ -1.99
RPAP3Q9H6T3 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.63□□□□□ -1.99
RPAP3Q9H6T3 MIR4293-201ENST00000584305 78 ntBASIC2.63□□□□□ -1.99
RPAP3Q9H6T3 MIR4760-201ENST00000585040 80 ntBASIC2.63□□□□□ -1.99
RPAP3Q9H6T3 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.63□□□□□ -1.99
RPAP3Q9H6T3 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.63□□□□□ -1.99
RPAP3Q9H6T3 OR10AB1P-201ENST00000609613 938 ntBASIC2.63□□□□□ -1.99
RPAP3Q9H6T3 AL356266.1-201ENST00000623311 483 ntBASIC2.63□□□□□ -1.99
RPAP3Q9H6T3 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
RPAP3Q9H6T3 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
RPAP3Q9H6T3 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
RPAP3Q9H6T3 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.63□□□□□ -1.99
RPAP3Q9H6T3 Y_RNA.46-201ENST00000362695 102 ntBASIC2.62□□□□□ -1.99
RPAP3Q9H6T3 Y_RNA.97-201ENST00000363094 102 ntBASIC2.62□□□□□ -1.99
RPAP3Q9H6T3 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.62□□□□□ -1.99
RPAP3Q9H6T3 SNORA64-201ENST00000384674 134 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms