Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.95□□□□□ -2.1
UPF3BQ9BZI7 AL078603.1-201ENST00000603824 313 ntBASIC1.95□□□□□ -2.1
UPF3BQ9BZI7 AL603758.1-201ENST00000618654 241 ntBASIC1.95□□□□□ -2.1
UPF3BQ9BZI7 MTND4P21-201ENST00000453886 1357 ntBASIC1.95□□□□□ -2.1
UPF3BQ9BZI7 OR5T3-201ENST00000303059 1023 ntBASIC1.94□□□□□ -2.1
UPF3BQ9BZI7 Z98749.2-208ENST00000381646 500 ntBASIC1.94□□□□□ -2.1
UPF3BQ9BZI7 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
UPF3BQ9BZI7 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
UPF3BQ9BZI7 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.94□□□□□ -2.1
UPF3BQ9BZI7 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.94□□□□□ -2.1
UPF3BQ9BZI7 GTF2IP7-202ENST00000436677 309 ntBASIC1.94□□□□□ -2.1
UPF3BQ9BZI7 GXYLT1P1-201ENST00000446657 490 ntBASIC1.94□□□□□ -2.1
UPF3BQ9BZI7 AL500527.1-201ENST00000448532 255 ntBASIC1.94□□□□□ -2.1
UPF3BQ9BZI7 MTND1P9-201ENST00000453775 944 ntBASIC1.94□□□□□ -2.1
UPF3BQ9BZI7 AC008526.1-201ENST00000509149 338 ntBASIC1.94□□□□□ -2.1
UPF3BQ9BZI7 AC093281.2-201ENST00000510153 597 ntBASIC1.94□□□□□ -2.1
UPF3BQ9BZI7 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.94□□□□□ -2.1
UPF3BQ9BZI7 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.94□□□□□ -2.1
UPF3BQ9BZI7 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.94□□□□□ -2.1
UPF3BQ9BZI7 CYCSP2-201ENST00000558168 301 ntBASIC1.94□□□□□ -2.1
UPF3BQ9BZI7 MTATP6P25-201ENST00000574491 261 ntBASIC1.94□□□□□ -2.1
UPF3BQ9BZI7 AC068276.1-201ENST00000605793 379 ntBASIC1.94□□□□□ -2.1
UPF3BQ9BZI7 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.94□□□□□ -2.1
UPF3BQ9BZI7 AC024257.5-201ENST00000612739 531 ntBASIC1.94□□□□□ -2.1
UPF3BQ9BZI7 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.94□□□□□ -2.1
UPF3BQ9BZI7 AC253576.2-201ENST00000618815 580 ntBASIC1.94□□□□□ -2.1
UPF3BQ9BZI7 AC091953.2-201ENST00000623979 160 ntBASIC1.94□□□□□ -2.1
UPF3BQ9BZI7 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
UPF3BQ9BZI7 Y_RNA.25-201ENST00000362528 102 ntBASIC1.93□□□□□ -2.1
UPF3BQ9BZI7 RNU6-216P-201ENST00000363282 104 ntBASIC1.93□□□□□ -2.1
UPF3BQ9BZI7 Y_RNA.191-201ENST00000363972 113 ntBASIC1.93□□□□□ -2.1
UPF3BQ9BZI7 RNU6-392P-201ENST00000364926 101 ntBASIC1.93□□□□□ -2.1
UPF3BQ9BZI7 RNU6-359P-201ENST00000365466 108 ntBASIC1.93□□□□□ -2.1
UPF3BQ9BZI7 RPL23AP29-201ENST00000397284 453 ntBASIC1.93□□□□□ -2.1
UPF3BQ9BZI7 AL512604.1-201ENST00000404812 257 ntBASIC1.93□□□□□ -2.1
UPF3BQ9BZI7 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.93□□□□□ -2.1
UPF3BQ9BZI7 AL357078.2-201ENST00000416486 427 ntBASIC1.93□□□□□ -2.1
UPF3BQ9BZI7 RPS24P7-201ENST00000416921 246 ntBASIC1.93□□□□□ -2.1
UPF3BQ9BZI7 AC007435.1-201ENST00000421086 415 ntBASIC1.93□□□□□ -2.1
UPF3BQ9BZI7 FO393414.1-201ENST00000428697 1184 ntBASIC1.93□□□□□ -2.1
UPF3BQ9BZI7 AL512661.1-201ENST00000434586 1253 ntBASIC1.93□□□□□ -2.1
UPF3BQ9BZI7 COX6CP18-201ENST00000448769 222 ntBASIC1.93□□□□□ -2.1
UPF3BQ9BZI7 USP9YP10-201ENST00000454868 628 ntBASIC1.93□□□□□ -2.1
UPF3BQ9BZI7 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.93□□□□□ -2.1
UPF3BQ9BZI7 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.93□□□□□ -2.1
UPF3BQ9BZI7 RNU7-95P-201ENST00000459222 64 ntBASIC1.93□□□□□ -2.1
UPF3BQ9BZI7 TOMM22P6-201ENST00000465035 409 ntBASIC1.93□□□□□ -2.1
UPF3BQ9BZI7 AL121769.1-201ENST00000469473 401 ntBASIC1.93□□□□□ -2.1
UPF3BQ9BZI7 AF213884.2-201ENST00000510417 903 ntBASIC1.93□□□□□ -2.1
UPF3BQ9BZI7 RNU6-751P-201ENST00000516382 101 ntBASIC1.93□□□□□ -2.1
UPF3BQ9BZI7 AC022861.1-201ENST00000522981 663 ntBASIC1.93□□□□□ -2.1
UPF3BQ9BZI7 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.93□□□□□ -2.1
UPF3BQ9BZI7 AC084851.1-201ENST00000529105 249 ntBASIC1.93□□□□□ -2.1
UPF3BQ9BZI7 CBX3P4-201ENST00000538909 354 ntBASIC1.93□□□□□ -2.1
UPF3BQ9BZI7 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC1.93□□□□□ -2.1
UPF3BQ9BZI7 LINC00557-201ENST00000563184 1279 ntBASIC1.93□□□□□ -2.1
UPF3BQ9BZI7 MIR4789-201ENST00000577469 82 ntBASIC1.93□□□□□ -2.1
UPF3BQ9BZI7 AC090897.2-201ENST00000581715 130 ntBASIC1.93□□□□□ -2.1
UPF3BQ9BZI7 AC105245.1-201ENST00000581934 244 ntBASIC1.93□□□□□ -2.1
UPF3BQ9BZI7 MKKS-204ENST00000639674 192 ntBASIC1.93□□□□□ -2.1
UPF3BQ9BZI7 MTND4P23-201ENST00000447723 1363 ntBASIC1.93□□□□□ -2.1
UPF3BQ9BZI7 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
UPF3BQ9BZI7 MCTS2P-201ENST00000394552 546 ntBASIC1.92□□□□□ -2.1
UPF3BQ9BZI7 RN7SKP101-201ENST00000411376 320 ntBASIC1.92□□□□□ -2.1
UPF3BQ9BZI7 AC004965.1-201ENST00000413033 213 ntBASIC1.92□□□□□ -2.1
UPF3BQ9BZI7 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.92□□□□□ -2.1
UPF3BQ9BZI7 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.92□□□□□ -2.1
UPF3BQ9BZI7 AC007919.1-201ENST00000429380 217 ntBASIC1.92□□□□□ -2.1
UPF3BQ9BZI7 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.92□□□□□ -2.1
UPF3BQ9BZI7 AC009474.2-201ENST00000451383 136 ntBASIC1.92□□□□□ -2.1
UPF3BQ9BZI7 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.92□□□□□ -2.1
UPF3BQ9BZI7 SSXP1-201ENST00000453640 473 ntBASIC1.92□□□□□ -2.1
UPF3BQ9BZI7 RPL12P25-201ENST00000455592 494 ntBASIC1.92□□□□□ -2.1
UPF3BQ9BZI7 AC008379.1-201ENST00000463655 464 ntBASIC1.92□□□□□ -2.1
UPF3BQ9BZI7 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC1.92□□□□□ -2.1
UPF3BQ9BZI7 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.92□□□□□ -2.1
UPF3BQ9BZI7 RPS27AP10-201ENST00000496103 208 ntBASIC1.92□□□□□ -2.1
UPF3BQ9BZI7 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.92□□□□□ -2.1
UPF3BQ9BZI7 RNA5SP480-201ENST00000516840 109 ntBASIC1.92□□□□□ -2.1
UPF3BQ9BZI7 AC023632.1-201ENST00000518463 375 ntBASIC1.92□□□□□ -2.1
UPF3BQ9BZI7 AP001189.2-201ENST00000527320 189 ntBASIC1.92□□□□□ -2.1
UPF3BQ9BZI7 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.92□□□□□ -2.1
UPF3BQ9BZI7 DUXAP1-201ENST00000556632 463 ntBASIC1.92□□□□□ -2.1
UPF3BQ9BZI7 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.92□□□□□ -2.1
UPF3BQ9BZI7 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
UPF3BQ9BZI7 MIR4255-201ENST00000579351 72 ntBASIC1.92□□□□□ -2.1
UPF3BQ9BZI7 MIR4303-201ENST00000581299 66 ntBASIC1.92□□□□□ -2.1
UPF3BQ9BZI7 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.92□□□□□ -2.1
UPF3BQ9BZI7 AL138478.1-201ENST00000612252 832 ntBASIC1.92□□□□□ -2.1
UPF3BQ9BZI7 AC104763.3-201ENST00000613765 618 ntBASIC1.92□□□□□ -2.1
UPF3BQ9BZI7 AL118556.2-201ENST00000614375 824 ntBASIC1.92□□□□□ -2.1
UPF3BQ9BZI7 AC010975.3-201ENST00000618727 978 ntBASIC1.92□□□□□ -2.1
UPF3BQ9BZI7 AL157770.1-201ENST00000623049 439 ntBASIC1.92□□□□□ -2.1
UPF3BQ9BZI7 U2.21-201ENST00000637295 81 ntBASIC1.92□□□□□ -2.1
UPF3BQ9BZI7 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.91□□□□□ -2.1
UPF3BQ9BZI7 UBE2L2-201ENST00000254302 429 ntBASIC1.91□□□□□ -2.1
UPF3BQ9BZI7 SNRPEP3-201ENST00000338402 276 ntBASIC1.91□□□□□ -2.1
UPF3BQ9BZI7 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
UPF3BQ9BZI7 RNU6-486P-201ENST00000363116 107 ntBASIC1.91□□□□□ -2.1
UPF3BQ9BZI7 SNRPEP2-201ENST00000397592 279 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 153.1 ms