Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 AC127537.2-201ENST00000439258 465 ntBASIC3.94□□□□□ -1.78
SALL3Q9BXA9 RPS12P18-201ENST00000442381 270 ntBASIC3.94□□□□□ -1.78
SALL3Q9BXA9 AC016696.1-201ENST00000446949 318 ntBASIC3.94□□□□□ -1.78
SALL3Q9BXA9 AC115115.1-201ENST00000449927 248 ntBASIC3.94□□□□□ -1.78
SALL3Q9BXA9 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.94□□□□□ -1.78
SALL3Q9BXA9 RNU7-180P-201ENST00000459240 63 ntBASIC3.94□□□□□ -1.78
SALL3Q9BXA9 AC090096.1-201ENST00000489168 390 ntBASIC3.94□□□□□ -1.78
SALL3Q9BXA9 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
SALL3Q9BXA9 RNU6-864P-201ENST00000516256 108 ntBASIC3.94□□□□□ -1.78
SALL3Q9BXA9 RNU7-51P-201ENST00000516560 62 ntBASIC3.94□□□□□ -1.78
SALL3Q9BXA9 Y_RNA.718-201ENST00000517110 102 ntBASIC3.94□□□□□ -1.78
SALL3Q9BXA9 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.94□□□□□ -1.78
SALL3Q9BXA9 AP000857.1-201ENST00000532151 543 ntBASIC3.94□□□□□ -1.78
SALL3Q9BXA9 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.94□□□□□ -1.78
SALL3Q9BXA9 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.94□□□□□ -1.78
SALL3Q9BXA9 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.94□□□□□ -1.78
SALL3Q9BXA9 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.94□□□□□ -1.78
SALL3Q9BXA9 AC110741.2-201ENST00000605278 268 ntBASIC3.94□□□□□ -1.78
SALL3Q9BXA9 HMGN2P28-201ENST00000606102 262 ntBASIC3.94□□□□□ -1.78
SALL3Q9BXA9 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.94□□□□□ -1.78
SALL3Q9BXA9 uc_338.25-201ENST00000613756 156 ntBASIC3.94□□□□□ -1.78
SALL3Q9BXA9 uc_338.15-201ENST00000615470 191 ntBASIC3.94□□□□□ -1.78
SALL3Q9BXA9 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.94□□□□□ -1.78
SALL3Q9BXA9 MTND5P42-201ENST00000637720 498 ntBASIC3.94□□□□□ -1.78
SALL3Q9BXA9 MTCO1P12-201ENST00000414273 1543 ntBASIC3.93□□□□□ -1.78
SALL3Q9BXA9 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SALL3Q9BXA9 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SALL3Q9BXA9 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SALL3Q9BXA9 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SALL3Q9BXA9 Y_RNA.145-201ENST00000363527 102 ntBASIC3.93□□□□□ -1.78
SALL3Q9BXA9 RNA5SP267-201ENST00000364893 126 ntBASIC3.93□□□□□ -1.78
SALL3Q9BXA9 Y_RNA.373-201ENST00000365600 103 ntBASIC3.93□□□□□ -1.78
SALL3Q9BXA9 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.93□□□□□ -1.78
SALL3Q9BXA9 Y_RNA.395-201ENST00000383945 109 ntBASIC3.93□□□□□ -1.78
SALL3Q9BXA9 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SALL3Q9BXA9 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SALL3Q9BXA9 SNORA75.4-201ENST00000391278 119 ntBASIC3.93□□□□□ -1.78
SALL3Q9BXA9 PTMAP5-201ENST00000393073 333 ntBASIC3.93□□□□□ -1.78
SALL3Q9BXA9 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SALL3Q9BXA9 AL606923.1-201ENST00000406616 190 ntBASIC3.93□□□□□ -1.78
SALL3Q9BXA9 OR6C66P-201ENST00000414917 930 ntBASIC3.93□□□□□ -1.78
SALL3Q9BXA9 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.93□□□□□ -1.78
SALL3Q9BXA9 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.93□□□□□ -1.78
SALL3Q9BXA9 RNU7-152P-201ENST00000458982 64 ntBASIC3.93□□□□□ -1.78
SALL3Q9BXA9 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SALL3Q9BXA9 AC092436.1-201ENST00000506450 503 ntBASIC3.93□□□□□ -1.78
SALL3Q9BXA9 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.93□□□□□ -1.78
SALL3Q9BXA9 RPL7P20-201ENST00000520308 745 ntBASIC3.93□□□□□ -1.78
SALL3Q9BXA9 AP004242.1-201ENST00000533701 349 ntBASIC3.93□□□□□ -1.78
SALL3Q9BXA9 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.93□□□□□ -1.78
SALL3Q9BXA9 FRG2DP-202ENST00000566967 323 ntBASIC3.93□□□□□ -1.78
SALL3Q9BXA9 AC121333.1-201ENST00000567488 2709 ntBASIC3.93□□□□□ -1.78
SALL3Q9BXA9 AC012182.1-201ENST00000570133 895 ntBASIC3.93□□□□□ -1.78
SALL3Q9BXA9 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
SALL3Q9BXA9 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.93□□□□□ -1.78
SALL3Q9BXA9 AC011471.1-201ENST00000585766 187 ntBASIC3.93□□□□□ -1.78
SALL3Q9BXA9 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.93□□□□□ -1.78
SALL3Q9BXA9 AL627309.6-201ENST00000606857 840 ntBASIC3.93□□□□□ -1.78
SALL3Q9BXA9 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.93□□□□□ -1.78
SALL3Q9BXA9 AL157817.1-201ENST00000614264 790 ntBASIC3.93□□□□□ -1.78
SALL3Q9BXA9 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.93□□□□□ -1.78
SALL3Q9BXA9 MIR7112-201ENST00000616126 65 ntBASIC3.93□□□□□ -1.78
SALL3Q9BXA9 AL133383.2-201ENST00000622958 2336 ntBASIC3.93□□□□□ -1.78
SALL3Q9BXA9 AL133216.2-202ENST00000634512 349 ntBASIC3.93□□□□□ -1.78
SALL3Q9BXA9 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.92□□□□□ -1.78
SALL3Q9BXA9 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
SALL3Q9BXA9 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SALL3Q9BXA9 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SALL3Q9BXA9 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
SALL3Q9BXA9 TAB3P1-202ENST00000452645 1634 ntBASIC3.92□□□□□ -1.78
SALL3Q9BXA9 MTND4P14-201ENST00000435799 1354 ntBASIC3.92□□□□□ -1.78
SALL3Q9BXA9 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.92□□□□□ -1.78
SALL3Q9BXA9 Y_RNA.132-201ENST00000363421 102 ntBASIC3.92□□□□□ -1.78
SALL3Q9BXA9 Y_RNA.414-201ENST00000384011 101 ntBASIC3.92□□□□□ -1.78
SALL3Q9BXA9 RNA5SP107-201ENST00000411358 122 ntBASIC3.92□□□□□ -1.78
SALL3Q9BXA9 VN1R36P-201ENST00000414936 291 ntBASIC3.92□□□□□ -1.78
SALL3Q9BXA9 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.92□□□□□ -1.78
SALL3Q9BXA9 RPS3AP52-201ENST00000435639 297 ntBASIC3.92□□□□□ -1.78
SALL3Q9BXA9 Y_RNA.635-201ENST00000459041 101 ntBASIC3.92□□□□□ -1.78
SALL3Q9BXA9 RPL9P32-201ENST00000464118 620 ntBASIC3.92□□□□□ -1.78
SALL3Q9BXA9 AC027575.1-201ENST00000481064 460 ntBASIC3.92□□□□□ -1.78
SALL3Q9BXA9 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.92□□□□□ -1.78
SALL3Q9BXA9 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.92□□□□□ -1.78
SALL3Q9BXA9 RNU6-559P-201ENST00000516151 98 ntBASIC3.92□□□□□ -1.78
SALL3Q9BXA9 Y_RNA.711-201ENST00000516993 102 ntBASIC3.92□□□□□ -1.78
SALL3Q9BXA9 HMGB1P41-201ENST00000520234 440 ntBASIC3.92□□□□□ -1.78
SALL3Q9BXA9 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.92□□□□□ -1.78
SALL3Q9BXA9 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.92□□□□□ -1.78
SALL3Q9BXA9 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.92□□□□□ -1.78
SALL3Q9BXA9 MIR4703-201ENST00000577728 79 ntBASIC3.92□□□□□ -1.78
SALL3Q9BXA9 MIR3124-201ENST00000582636 67 ntBASIC3.92□□□□□ -1.78
SALL3Q9BXA9 AL512605.2-201ENST00000592972 256 ntBASIC3.92□□□□□ -1.78
SALL3Q9BXA9 DPPA3P3-201ENST00000603842 430 ntBASIC3.92□□□□□ -1.78
SALL3Q9BXA9 AL162713.1-201ENST00000604480 262 ntBASIC3.92□□□□□ -1.78
SALL3Q9BXA9 AL080274.1-201ENST00000605565 220 ntBASIC3.92□□□□□ -1.78
SALL3Q9BXA9 AL590099.1-201ENST00000615276 138 ntBASIC3.92□□□□□ -1.78
SALL3Q9BXA9 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.92□□□□□ -1.78
SALL3Q9BXA9 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SALL3Q9BXA9 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
SALL3Q9BXA9 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms